RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
SNHG1-208ENST00000538266 SOGA1O94964 1423 aa7.21□□□□□ -1.25
SNHG1-208ENST00000538266 LSM11P83369 360 aaKnown RBP eCLIP7.21□□□□□ -1.26
SNHG1-208ENST00000538266 MAP2K5Q13163 448 aa7.21□□□□□ -1.26
SNHG1-208ENST00000538266 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
SNHG1-208ENST00000538266 FAM198AQ9UFP1 575 aa7.21□□□□□ -1.26
SNHG1-208ENST00000538266 VPS9D1Q9Y2B5 631 aa7.21□□□□□ -1.26
SNHG1-208ENST00000538266 FAM161AQ3B820 660 aa7.2□□□□□ -1.26
SNHG1-208ENST00000538266 AK7Q96M32 723 aa7.2□□□□□ -1.26
SNHG1-208ENST00000538266 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
SNHG1-208ENST00000538266 RAD54L2Q9Y4B4 1467 aa7.19□□□□□ -1.26
SNHG1-208ENST00000538266 TK2O00142 265 aa7.19□□□□□ -1.26
SNHG1-208ENST00000538266 OATP04181 439 aa7.19□□□□□ -1.26
SNHG1-208ENST00000538266 TATDN2Q93075 761 aa7.19□□□□□ -1.26
SNHG1-208ENST00000538266 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
SNHG1-208ENST00000538266 ADGRD1Q6QNK2 874 aa7.18□□□□□ -1.26
SNHG1-208ENST00000538266 NUDT18Q6ZVK8 323 aa7.18□□□□□ -1.26
SNHG1-208ENST00000538266 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
SNHG1-208ENST00000538266 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
SNHG1-208ENST00000538266 PNMA3Q9UL41 463 aa7.18□□□□□ -1.26
SNHG1-208ENST00000538266 ABCA10Q8WWZ4 1543 aa7.17□□□□□ -1.26
SNHG1-208ENST00000538266 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
SNHG1-208ENST00000538266 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
SNHG1-208ENST00000538266 SMAPO00193 183 aa7.17□□□□□ -1.26
SNHG1-208ENST00000538266 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
SNHG1-208ENST00000538266 STAC3Q96MF2 364 aa7.17□□□□□ -1.26
SNHG1-208ENST00000538266 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
SNHG1-208ENST00000538266 ZNF608Q9ULD9 1512 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-208ENST00000538266 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
SNHG1-208ENST00000538266 EYA1Q99502 592 aa7.16□□□□□ -1.26
SNHG1-208ENST00000538266 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
SNHG1-208ENST00000538266 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-208ENST00000538266 C3orf80F5H4A9 247 aa7.15□□□□□ -1.26
SNHG1-208ENST00000538266 TRIM66O15016 1216 aa7.15□□□□□ -1.26
SNHG1-208ENST00000538266 TDRD9Q8NDG6 1382 aaKnown RBP7.15□□□□□ -1.26
SNHG1-208ENST00000538266 HRO43593 1189 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 AQRO60306 1485 aaKnown RBP eCLIP7.14□□□□□ -1.273e-14■■■■■ 46.6
SNHG1-208ENST00000538266 GAPVD1Q14C86 1478 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 METTL3Q86U44 580 aaKnown RBP7.14□□□□□ -1.27
SNHG1-208ENST00000538266 KIF27Q86VH2 1401 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 MRPL50Q8N5N7 158 aaKnown RBP7.14□□□□□ -1.27
SNHG1-208ENST00000538266 PXYLP1Q8TE99 480 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 ABCA5Q8WWZ7 1642 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 NBPF3Q9H094 633 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 PCDH10Q9P2E7 1040 aa7.14□□□□□ -1.27
SNHG1-208ENST00000538266 SEPT9Q9UHD8 586 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-208ENST00000538266 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
SNHG1-208ENST00000538266 PBRM1Q86U86 1689 aa7.12□□□□□ -1.27
SNHG1-208ENST00000538266 GRIN2BQ13224 1484 aa7.12□□□□□ -1.27
SNHG1-208ENST00000538266 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
SNHG1-208ENST00000538266 HDGFP51858 240 aaKnown RBP7.12□□□□□ -1.27
SNHG1-208ENST00000538266 GOLGA8CPA6NN73 597 aa7.11□□□□□ -1.27
SNHG1-208ENST00000538266 FAM98CQ17RN3 349 aaKnown RBP7.11□□□□□ -1.27
SNHG1-208ENST00000538266 LAPTM4BQ86VI4 370 aa7.11□□□□□ -1.27
SNHG1-208ENST00000538266 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-208ENST00000538266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.1□□□□□ -1.27
SNHG1-208ENST00000538266 PDE4DQ08499 809 aa7.1□□□□□ -1.27
SNHG1-208ENST00000538266 NLRP7Q8WX94 980 aa7.1□□□□□ -1.27
SNHG1-208ENST00000538266 ERICH3Q5RHP9 1530 aa7.1□□□□□ -1.27
SNHG1-208ENST00000538266 SNAPC4Q5SXM2 1469 aa7.1□□□□□ -1.27
SNHG1-208ENST00000538266 DNAJB2P25686 324 aa7.09□□□□□ -1.27
SNHG1-208ENST00000538266 MDM2Q00987 491 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-208ENST00000538266 ZFRQ96KR1 1074 aaKnown RBP7.09□□□□□ -1.27
SNHG1-208ENST00000538266 TTLL12Q14166 644 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-208ENST00000538266 AMHR2Q16671 573 aa7.08□□□□□ -1.28
SNHG1-208ENST00000538266 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-208ENST00000538266 EEA1Q15075 1411 aa7.08□□□□□ -1.28
SNHG1-208ENST00000538266 CUL7Q14999 1698 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 SYNJ2O15056 1496 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 CLCN1P35523 988 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 NEUROD2Q15784 382 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 TMEM134Q9H6X4 195 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 ADAMTS12P58397 1594 aa7.07□□□□□ -1.28
SNHG1-208ENST00000538266 SWT1Q5T5J6 900 aaKnown RBP7.06□□□□□ -1.28
SNHG1-208ENST00000538266 SAMD7Q7Z3H4 446 aa7.06□□□□□ -1.28
SNHG1-208ENST00000538266 CHMP7Q8WUX9 453 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-208ENST00000538266 REPIN1Q9BWE0 567 aaKnown RBP7.06□□□□□ -1.28
SNHG1-208ENST00000538266 GPCPD1Q9NPB8 672 aa7.06□□□□□ -1.28
SNHG1-208ENST00000538266 FHAD1B1AJZ9 1412 aa7.06□□□□□ -1.28
SNHG1-208ENST00000538266 CHD1O14646 1710 aa7.06□□□□□ -1.28
SNHG1-208ENST00000538266 PARP9Q8IXQ6 854 aa7.05□□□□□ -1.28
SNHG1-208ENST00000538266 WNT2BQ93097 391 aa7.05□□□□□ -1.28
SNHG1-208ENST00000538266 RUSC2Q8N2Y8 1516 aa7.05□□□□□ -1.28
SNHG1-208ENST00000538266 IGF1RP08069 1367 aa7.05□□□□□ -1.28
SNHG1-208ENST00000538266 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-208ENST00000538266 SLC4A3P48751 1232 aa7.04□□□□□ -1.28
SNHG1-208ENST00000538266 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-208ENST00000538266 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-208ENST00000538266 ANKK1Q8NFD2 765 aa7.04□□□□□ -1.28
SNHG1-208ENST00000538266 TMUB1Q9BVT8 246 aa7.04□□□□□ -1.28
SNHG1-208ENST00000538266 GPBP1L1Q9HC44 474 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-208ENST00000538266 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-208ENST00000538266 CARMIL1Q5VZK9 1371 aa7.04□□□□□ -1.28
SNHG1-208ENST00000538266 GRIN2AQ12879 1464 aa7.04□□□□□ -1.28
SNHG1-208ENST00000538266 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
SNHG1-208ENST00000538266 RSPH4AQ5TD94 716 aa7.03□□□□□ -1.28
SNHG1-208ENST00000538266 SPNS2Q8IVW8 549 aa7.03□□□□□ -1.28
SNHG1-208ENST00000538266 KCTD12Q96CX2 325 aaKnown RBP7.03□□□□□ -1.28
SNHG1-208ENST00000538266 LRCH3Q96II8 777 aa7.03□□□□□ -1.28
SNHG1-208ENST00000538266 GIGYF2Q6Y7W6 1299 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms