RNA–Protein interactions for RNA: ENST00000538195.1

PDCD2-206, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-206ENST00000538195 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
PDCD2-206ENST00000538195 EMP3P54852 163 aa13.15□□□□□ -0.3
PDCD2-206ENST00000538195 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
PDCD2-206ENST00000538195 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
PDCD2-206ENST00000538195 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
PDCD2-206ENST00000538195 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
PDCD2-206ENST00000538195 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
PDCD2-206ENST00000538195 SPIRE2Q8WWL2 714 aa13.13□□□□□ -0.31
PDCD2-206ENST00000538195 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
PDCD2-206ENST00000538195 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
PDCD2-206ENST00000538195 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
PDCD2-206ENST00000538195 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDCD2-206ENST00000538195 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
PDCD2-206ENST00000538195 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
PDCD2-206ENST00000538195 RIC3Q7Z5B4 369 aa13.09□□□□□ -0.31
PDCD2-206ENST00000538195 SLC4A5Q9BY07 1137 aa13.09□□□□□ -0.31
PDCD2-206ENST00000538195 LIMD1Q9UGP4 676 aa13.09□□□□□ -0.31
PDCD2-206ENST00000538195 PBX2P40425 430 aa13.07□□□□□ -0.32
PDCD2-206ENST00000538195 SWT1Q5T5J6 900 aaKnown RBP13.07□□□□□ -0.32
PDCD2-206ENST00000538195 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
PDCD2-206ENST00000538195 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
PDCD2-206ENST00000538195 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
PDCD2-206ENST00000538195 MOXD2PA6NHM9 499 aa13.04□□□□□ -0.32
PDCD2-206ENST00000538195 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
PDCD2-206ENST00000538195 SPTLC1O15269 473 aa13.03□□□□□ -0.32
PDCD2-206ENST00000538195 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
PDCD2-206ENST00000538195 MCM6Q14566 821 aa13.03□□□□□ -0.32
PDCD2-206ENST00000538195 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
PDCD2-206ENST00000538195 KDM4AO75164 1064 aa13.02□□□□□ -0.33
PDCD2-206ENST00000538195 NDUFV2P19404 249 aa13.02□□□□□ -0.33
PDCD2-206ENST00000538195 FAM98CQ17RN3 349 aaKnown RBP13.02□□□□□ -0.33
PDCD2-206ENST00000538195 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.33
PDCD2-206ENST00000538195 RFC5P40937 340 aa13.01□□□□□ -0.33
PDCD2-206ENST00000538195 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
PDCD2-206ENST00000538195 SLC10A3P09131 477 aa13□□□□□ -0.33
PDCD2-206ENST00000538195 UBTFP17480 764 aaKnown RBP13□□□□□ -0.33
PDCD2-206ENST00000538195 GCGRP47871 477 aa13□□□□□ -0.33
PDCD2-206ENST00000538195 HS3ST6Q96QI5 342 aa13□□□□□ -0.33
PDCD2-206ENST00000538195 CLUAP1Q96AJ1 413 aa12.99□□□□□ -0.33
PDCD2-206ENST00000538195 SLC4A3P48751 1232 aa12.98□□□□□ -0.33
PDCD2-206ENST00000538195 TUSC1Q2TAM9 212 aa12.98□□□□□ -0.33
PDCD2-206ENST00000538195 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
PDCD2-206ENST00000538195 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
PDCD2-206ENST00000538195 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
PDCD2-206ENST00000538195 PPP2R2DQ66LE6 453 aa12.97□□□□□ -0.33
PDCD2-206ENST00000538195 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
PDCD2-206ENST00000538195 GJA5P36382 358 aa12.96□□□□□ -0.33
PDCD2-206ENST00000538195 USP46P62068 366 aa12.96□□□□□ -0.33
PDCD2-206ENST00000538195 QPCTQ16769 361 aa12.96□□□□□ -0.33
PDCD2-206ENST00000538195 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
PDCD2-206ENST00000538195 HOXA2O43364 376 aa12.95□□□□□ -0.34
PDCD2-206ENST00000538195 LAPTM4BQ86VI4 370 aa12.95□□□□□ -0.34
PDCD2-206ENST00000538195 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
PDCD2-206ENST00000538195 RNF40O75150 1001 aa12.94□□□□□ -0.34
PDCD2-206ENST00000538195 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
PDCD2-206ENST00000538195 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
PDCD2-206ENST00000538195 ARXQ96QS3 562 aa12.94□□□□□ -0.34
PDCD2-206ENST00000538195 SPDYE5A6NIY4 337 aa12.93□□□□□ -0.34
PDCD2-206ENST00000538195 TK2O00142 265 aa12.93□□□□□ -0.34
PDCD2-206ENST00000538195 LILRB3O75022 631 aa12.93□□□□□ -0.34
PDCD2-206ENST00000538195 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
PDCD2-206ENST00000538195 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
PDCD2-206ENST00000538195 A6NJR5 290 aa12.92□□□□□ -0.34
PDCD2-206ENST00000538195 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
PDCD2-206ENST00000538195 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
PDCD2-206ENST00000538195 NUTM2DQ5VT03 806 aaPredicted RBP12.92□□□□□ -0.34
PDCD2-206ENST00000538195 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
PDCD2-206ENST00000538195 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
PDCD2-206ENST00000538195 FDX1P10109 184 aa12.91□□□□□ -0.34
PDCD2-206ENST00000538195 GUCA2AQ02747 115 aa12.91□□□□□ -0.34
PDCD2-206ENST00000538195 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
PDCD2-206ENST00000538195 MRPL50Q8N5N7 158 aaKnown RBP12.91□□□□□ -0.34
PDCD2-206ENST00000538195 HLA-CQ95604 372 aa12.91□□□□□ -0.34
PDCD2-206ENST00000538195 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
PDCD2-206ENST00000538195 CFHP08603 1231 aa12.9□□□□□ -0.34
PDCD2-206ENST00000538195 ARID3CA6NKF2 412 aa12.89□□□□□ -0.35
PDCD2-206ENST00000538195 RAD21O60216 631 aa12.89□□□□□ -0.35
PDCD2-206ENST00000538195 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.354e-9■□□□□ 9.9
PDCD2-206ENST00000538195 ADGRD1Q6QNK2 874 aa12.89□□□□□ -0.35
PDCD2-206ENST00000538195 POM121Q96HA1 1249 aa12.89□□□□□ -0.35
PDCD2-206ENST00000538195 PRPF38BQ5VTL8 546 aaKnown RBP12.88□□□□□ -0.35
PDCD2-206ENST00000538195 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
PDCD2-206ENST00000538195 PCDHGC3Q9UN70 934 aa12.88□□□□□ -0.35
PDCD2-206ENST00000538195 AP1G2O75843 785 aa12.87□□□□□ -0.35
PDCD2-206ENST00000538195 HRCP23327 699 aa12.87□□□□□ -0.35
PDCD2-206ENST00000538195 FUT2Q10981 343 aa12.87□□□□□ -0.35
PDCD2-206ENST00000538195 APBB1O00213 710 aa12.86□□□□□ -0.35
PDCD2-206ENST00000538195 TRAK2O60296 914 aa12.86□□□□□ -0.35
PDCD2-206ENST00000538195 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
PDCD2-206ENST00000538195 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
PDCD2-206ENST00000538195 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
PDCD2-206ENST00000538195 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
PDCD2-206ENST00000538195 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
PDCD2-206ENST00000538195 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
PDCD2-206ENST00000538195 MTMR14Q8NCE2 650 aa12.83□□□□□ -0.36
PDCD2-206ENST00000538195 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
PDCD2-206ENST00000538195 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
PDCD2-206ENST00000538195 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
PDCD2-206ENST00000538195 HRO43593 1189 aa12.82□□□□□ -0.36
PDCD2-206ENST00000538195 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms