RNA–Protein interactions for RNA: ENST00000537315.5

RFC5-208, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-208ENST00000537315 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
RFC5-208ENST00000537315 UBAP1LF5GYI3 381 aa18.26■□□□□ 0.51
RFC5-208ENST00000537315 SLC52A1Q9NWF4 448 aa18.26■□□□□ 0.51
RFC5-208ENST00000537315 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
RFC5-208ENST00000537315 RIMS2Q9UQ26 1411 aa18.24■□□□□ 0.51
RFC5-208ENST00000537315 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
RFC5-208ENST00000537315 TRPM2O94759 1503 aa18.23■□□□□ 0.51
RFC5-208ENST00000537315 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
RFC5-208ENST00000537315 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
RFC5-208ENST00000537315 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
RFC5-208ENST00000537315 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
RFC5-208ENST00000537315 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
RFC5-208ENST00000537315 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
RFC5-208ENST00000537315 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
RFC5-208ENST00000537315 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
RFC5-208ENST00000537315 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
RFC5-208ENST00000537315 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
RFC5-208ENST00000537315 BCANQ96GW7 911 aa18.15■□□□□ 0.5
RFC5-208ENST00000537315 NEXMIFQ5QGS0 1516 aa18.14■□□□□ 0.49
RFC5-208ENST00000537315 PPLO60437 1756 aa18.13■□□□□ 0.49
RFC5-208ENST00000537315 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
RFC5-208ENST00000537315 ADAMTS13Q76LX8 1427 aa18.13■□□□□ 0.49
RFC5-208ENST00000537315 TOM1O60784 492 aa18.12■□□□□ 0.49
RFC5-208ENST00000537315 SETBP1Q9Y6X0 1596 aa18.11■□□□□ 0.49
RFC5-208ENST00000537315 XRN1Q8IZH2 1706 aaKnown RBP18.1■□□□□ 0.49
RFC5-208ENST00000537315 TMEM94Q12767 1356 aa18.1■□□□□ 0.49
RFC5-208ENST00000537315 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
RFC5-208ENST00000537315 RBM33Q96EV2 1170 aaKnown RBP18.09■□□□□ 0.49
RFC5-208ENST00000537315 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
RFC5-208ENST00000537315 KCNA6P17658 529 aa18.08■□□□□ 0.48
RFC5-208ENST00000537315 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
RFC5-208ENST00000537315 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
RFC5-208ENST00000537315 HSPA1LP34931 641 aa18.07■□□□□ 0.48
RFC5-208ENST00000537315 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
RFC5-208ENST00000537315 SLC4A1APQ9BWU0 796 aaKnown RBP18.06■□□□□ 0.48
RFC5-208ENST00000537315 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
RFC5-208ENST00000537315 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
RFC5-208ENST00000537315 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
RFC5-208ENST00000537315 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
RFC5-208ENST00000537315 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
RFC5-208ENST00000537315 PTPRUQ92729 1446 aa18.03■□□□□ 0.48
RFC5-208ENST00000537315 NALCNQ8IZF0 1738 aa18.01■□□□□ 0.47
RFC5-208ENST00000537315 SETD5Q9C0A6 1442 aa18■□□□□ 0.47
RFC5-208ENST00000537315 TBX22Q9Y458 520 aa18■□□□□ 0.47
RFC5-208ENST00000537315 PHLPP1O60346 1717 aa18■□□□□ 0.47
RFC5-208ENST00000537315 MSH6P52701 1360 aa17.99■□□□□ 0.47
RFC5-208ENST00000537315 PIK3R4Q99570 1358 aa17.99■□□□□ 0.47
RFC5-208ENST00000537315 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
RFC5-208ENST00000537315 CCDC144AA2RUR9 1427 aa17.97■□□□□ 0.47
RFC5-208ENST00000537315 METP08581 1390 aa17.96■□□□□ 0.47
RFC5-208ENST00000537315 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
RFC5-208ENST00000537315 AMOTL2Q9Y2J4 779 aa17.93■□□□□ 0.46
RFC5-208ENST00000537315 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
RFC5-208ENST00000537315 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
RFC5-208ENST00000537315 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
RFC5-208ENST00000537315 COL16A1Q07092 1604 aaPredicted RBP17.91■□□□□ 0.46
RFC5-208ENST00000537315 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
RFC5-208ENST00000537315 NCOA3Q9Y6Q9 1424 aa17.9■□□□□ 0.46
RFC5-208ENST00000537315 ASXL1Q8IXJ9 1541 aa17.89■□□□□ 0.45
RFC5-208ENST00000537315 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
RFC5-208ENST00000537315 NHSL1Q5SYE7 1610 aa17.87■□□□□ 0.45
RFC5-208ENST00000537315 AHDC1Q5TGY3 1603 aaPredicted RBP17.87■□□□□ 0.45
RFC5-208ENST00000537315 RPGRIP1LQ68CZ1 1315 aa17.86■□□□□ 0.45
RFC5-208ENST00000537315 DCCP43146 1447 aa17.86■□□□□ 0.45
RFC5-208ENST00000537315 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
RFC5-208ENST00000537315 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
RFC5-208ENST00000537315 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
RFC5-208ENST00000537315 RGL3Q3MIN7 710 aa17.85■□□□□ 0.45
RFC5-208ENST00000537315 SLAIN2Q9P270 581 aa17.85■□□□□ 0.45
RFC5-208ENST00000537315 LAMC1P11047 1609 aa17.84■□□□□ 0.45
RFC5-208ENST00000537315 ADGRF5Q8IZF2 1346 aa17.83■□□□□ 0.44
RFC5-208ENST00000537315 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
RFC5-208ENST00000537315 PIK3C2GO75747 1445 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 MST1RQ04912 1400 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 PRAG1Q86YV5 1406 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 ATF3P18847 181 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
RFC5-208ENST00000537315 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
RFC5-208ENST00000537315 ANKRD30BQ9BXX2 1392 aa17.8■□□□□ 0.44
RFC5-208ENST00000537315 MYOM2P54296 1465 aa17.8■□□□□ 0.44
RFC5-208ENST00000537315 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
RFC5-208ENST00000537315 CDC42BPGQ6DT37 1551 aa17.79■□□□□ 0.44
RFC5-208ENST00000537315 NRXN1Q9ULB1 1477 aa17.77■□□□□ 0.44
RFC5-208ENST00000537315 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
RFC5-208ENST00000537315 FMN2Q9NZ56 1722 aa17.75■□□□□ 0.43
RFC5-208ENST00000537315 TECPR2O15040 1411 aa17.74■□□□□ 0.43
RFC5-208ENST00000537315 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
RFC5-208ENST00000537315 LRP6O75581 1613 aa17.74■□□□□ 0.43
RFC5-208ENST00000537315 JCADQ9P266 1359 aa17.73■□□□□ 0.43
RFC5-208ENST00000537315 C1orf167Q5SNV9 1468 aa17.72■□□□□ 0.43
RFC5-208ENST00000537315 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
RFC5-208ENST00000537315 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
RFC5-208ENST00000537315 STK26Q9P289 416 aa17.71■□□□□ 0.43
RFC5-208ENST00000537315 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
RFC5-208ENST00000537315 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
RFC5-208ENST00000537315 DDX17Q92841 729 aaKnown RBP17.69■□□□□ 0.42
RFC5-208ENST00000537315 ADGRB1O14514 1584 aa17.69■□□□□ 0.42
RFC5-208ENST00000537315 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
RFC5-208ENST00000537315 SOCS7O14512 581 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms