RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RIC3Q7Z5B4 369 aa10.41□□□□□ -0.74
PRKDC-208ENST00000536710 ZBED2Q9BTP6 218 aa10.41□□□□□ -0.74
PRKDC-208ENST00000536710 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
PRKDC-208ENST00000536710 ARHGAP33O14559 1287 aa10.4□□□□□ -0.74
PRKDC-208ENST00000536710 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
PRKDC-208ENST00000536710 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
PRKDC-208ENST00000536710 MCM6Q14566 821 aa10.39□□□□□ -0.75
PRKDC-208ENST00000536710 RSPH4AQ5TD94 716 aa10.39□□□□□ -0.75
PRKDC-208ENST00000536710 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
PRKDC-208ENST00000536710 LHX8Q68G74 356 aa10.38□□□□□ -0.75
PRKDC-208ENST00000536710 HOMEZQ8IX15 550 aa10.38□□□□□ -0.75
PRKDC-208ENST00000536710 CLUAP1Q96AJ1 413 aa10.38□□□□□ -0.75
PRKDC-208ENST00000536710 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
PRKDC-208ENST00000536710 HDGFP51858 240 aaKnown RBP10.37□□□□□ -0.75
PRKDC-208ENST00000536710 EMP3P54852 163 aa10.37□□□□□ -0.75
PRKDC-208ENST00000536710 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
PRKDC-208ENST00000536710 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
PRKDC-208ENST00000536710 RFC5P40937 340 aa10.36□□□□□ -0.75
PRKDC-208ENST00000536710 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
PRKDC-208ENST00000536710 SPTLC1O15269 473 aa10.35□□□□□ -0.75
PRKDC-208ENST00000536710 KDM4AO75164 1064 aa10.35□□□□□ -0.75
PRKDC-208ENST00000536710 NDUFV2P19404 249 aa10.35□□□□□ -0.75
PRKDC-208ENST00000536710 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
PRKDC-208ENST00000536710 DMRTA1Q5VZB9 504 aa10.35□□□□□ -0.75
PRKDC-208ENST00000536710 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
PRKDC-208ENST00000536710 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
PRKDC-208ENST00000536710 ST18O60284 1047 aa10.34□□□□□ -0.75
PRKDC-208ENST00000536710 SLC4A3P48751 1232 aa10.34□□□□□ -0.75
PRKDC-208ENST00000536710 ARID3AQ99856 593 aa10.34□□□□□ -0.75
PRKDC-208ENST00000536710 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
PRKDC-208ENST00000536710 RAD21O60216 631 aa10.33□□□□□ -0.76
PRKDC-208ENST00000536710 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
PRKDC-208ENST00000536710 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-208ENST00000536710 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-208ENST00000536710 APBB1O00213 710 aa10.32□□□□□ -0.76
PRKDC-208ENST00000536710 PBX2P40425 430 aa10.32□□□□□ -0.76
PRKDC-208ENST00000536710 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
PRKDC-208ENST00000536710 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-208ENST00000536710 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-208ENST00000536710 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
PRKDC-208ENST00000536710 A6NJR5 290 aa10.31□□□□□ -0.76
PRKDC-208ENST00000536710 RNF40O75150 1001 aa10.31□□□□□ -0.76
PRKDC-208ENST00000536710 GCGRP47871 477 aa10.31□□□□□ -0.76
PRKDC-208ENST00000536710 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
PRKDC-208ENST00000536710 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
PRKDC-208ENST00000536710 SLC4A5Q9BY07 1137 aa10.31□□□□□ -0.76
PRKDC-208ENST00000536710 USP46P62068 366 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 TUSC1Q2TAM9 212 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 BANK1Q8NDB2 785 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 SNRKQ9NRH2 765 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 VPS9D1Q9Y2B5 631 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
PRKDC-208ENST00000536710 SLC10A3P09131 477 aa10.29□□□□□ -0.76
PRKDC-208ENST00000536710 QPCTQ16769 361 aa10.29□□□□□ -0.76
PRKDC-208ENST00000536710 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
PRKDC-208ENST00000536710 POM121Q96HA1 1249 aa10.29□□□□□ -0.76
PRKDC-208ENST00000536710 HOXA2O43364 376 aa10.28□□□□□ -0.76
PRKDC-208ENST00000536710 TRAK2O60296 914 aa10.28□□□□□ -0.76
PRKDC-208ENST00000536710 GJA5P36382 358 aa10.28□□□□□ -0.76
PRKDC-208ENST00000536710 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
PRKDC-208ENST00000536710 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
PRKDC-208ENST00000536710 AP1G2O75843 785 aa10.27□□□□□ -0.77
PRKDC-208ENST00000536710 FDX1P10109 184 aa10.27□□□□□ -0.77
PRKDC-208ENST00000536710 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
PRKDC-208ENST00000536710 PROSER2Q86WR7 435 aaPredicted RBP10.27□□□□□ -0.77
PRKDC-208ENST00000536710 CABLES1Q8TDN4 633 aa10.27□□□□□ -0.77
PRKDC-208ENST00000536710 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
PRKDC-208ENST00000536710 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
PRKDC-208ENST00000536710 LILRB3O75022 631 aa10.26□□□□□ -0.77
PRKDC-208ENST00000536710 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
PRKDC-208ENST00000536710 ZBTB3Q9H5J0 574 aa10.25□□□□□ -0.77
PRKDC-208ENST00000536710 CFHP08603 1231 aa10.24□□□□□ -0.77
PRKDC-208ENST00000536710 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
PRKDC-208ENST00000536710 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
PRKDC-208ENST00000536710 HLA-CQ95604 372 aa10.24□□□□□ -0.77
PRKDC-208ENST00000536710 HRCP23327 699 aa10.23□□□□□ -0.77
PRKDC-208ENST00000536710 GRIPAP1Q4V328 841 aa10.23□□□□□ -0.77
PRKDC-208ENST00000536710 PRPF38BQ5VTL8 546 aaKnown RBP10.23□□□□□ -0.77
PRKDC-208ENST00000536710 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
PRKDC-208ENST00000536710 HS3ST6Q96QI5 342 aa10.23□□□□□ -0.77
PRKDC-208ENST00000536710 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
PRKDC-208ENST00000536710 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
PRKDC-208ENST00000536710 ZNF777Q9ULD5 760 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-208ENST00000536710 FUT2Q10981 343 aa10.21□□□□□ -0.77
PRKDC-208ENST00000536710 MTMR14Q8NCE2 650 aa10.21□□□□□ -0.77
PRKDC-208ENST00000536710 TSC1Q92574 1164 aa10.21□□□□□ -0.77
PRKDC-208ENST00000536710 PRM3Q9NNZ6 103 aa10.21□□□□□ -0.77
PRKDC-208ENST00000536710 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
PRKDC-208ENST00000536710 C6orf229H3BNL8 230 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 TK2O00142 265 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 USP17L8P0C7I0 530 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 MTMR2Q13614 643 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 GDPD2Q9HCC8 539 aa10.19□□□□□ -0.78
PRKDC-208ENST00000536710 BHMG1C9JSJ3 638 aaPredicted RBP10.18□□□□□ -0.78
PRKDC-208ENST00000536710 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
PRKDC-208ENST00000536710 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
PRKDC-208ENST00000536710 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms