RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 HFM1A2PYH4 1435 aa27■■□□□ 1.91
CCDC61-201ENST00000536603 RBM33Q96EV2 1170 aaKnown RBP26.99■■□□□ 1.91
CCDC61-201ENST00000536603 ADGRB3O60242 1522 aa26.98■■□□□ 1.91
CCDC61-201ENST00000536603 FAM135BQ49AJ0 1406 aa26.98■■□□□ 1.91
CCDC61-201ENST00000536603 SLC52A1Q9NWF4 448 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 GCC2Q8IWJ2 1684 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 NOS1P29475 1434 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 TET3O43151 1660 aa26.96■■□□□ 1.91
CCDC61-201ENST00000536603 ROBO1Q9Y6N7 1651 aa26.94■■□□□ 1.9
CCDC61-201ENST00000536603 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
CCDC61-201ENST00000536603 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
CCDC61-201ENST00000536603 RGS17Q9UGC6 210 aaPredicted RBP26.91■■□□□ 1.9
CCDC61-201ENST00000536603 NKTRP30414 1462 aaKnown RBP26.9■■□□□ 1.9
CCDC61-201ENST00000536603 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
CCDC61-201ENST00000536603 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
CCDC61-201ENST00000536603 MSH6P52701 1360 aa26.89■■□□□ 1.9
CCDC61-201ENST00000536603 MYO5BQ9ULV0 1848 aa26.89■■□□□ 1.9
CCDC61-201ENST00000536603 HDGFP51858 240 aaKnown RBP26.89■■□□□ 1.9
CCDC61-201ENST00000536603 NWD1Q149M9 1564 aa26.88■■□□□ 1.89
CCDC61-201ENST00000536603 CHGAP10645 457 aaKnown RBP26.86■■□□□ 1.89
CCDC61-201ENST00000536603 E9PCH4 1651 aa26.84■■□□□ 1.89
CCDC61-201ENST00000536603 RIMS2Q9UQ26 1411 aa26.83■■□□□ 1.89
CCDC61-201ENST00000536603 SLAIN2Q9P270 581 aa26.83■■□□□ 1.89
CCDC61-201ENST00000536603 PLEKHG1Q9ULL1 1385 aa26.83■■□□□ 1.88
CCDC61-201ENST00000536603 CHD2O14647 1828 aaKnown RBP26.81■■□□□ 1.88
CCDC61-201ENST00000536603 PHLPP1O60346 1717 aa26.81■■□□□ 1.88
CCDC61-201ENST00000536603 ZFYVE9O95405 1425 aa26.81■■□□□ 1.88
CCDC61-201ENST00000536603 C14orf37Q86TY3 774 aa26.8■■□□□ 1.88
CCDC61-201ENST00000536603 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
CCDC61-201ENST00000536603 TMEM131LA2VDJ0 1609 aa26.79■■□□□ 1.88
CCDC61-201ENST00000536603 POTEAQ6S8J7 498 aa26.79■■□□□ 1.88
CCDC61-201ENST00000536603 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
CCDC61-201ENST00000536603 SLC4A1APQ9BWU0 796 aaKnown RBP26.77■■□□□ 1.88
CCDC61-201ENST00000536603 NUTM2DQ5VT03 806 aaPredicted RBP26.76■■□□□ 1.87
CCDC61-201ENST00000536603 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
CCDC61-201ENST00000536603 JCADQ9P266 1359 aa26.72■■□□□ 1.87
CCDC61-201ENST00000536603 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
CCDC61-201ENST00000536603 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
CCDC61-201ENST00000536603 MPHOSPH9Q99550 1183 aa26.68■■□□□ 1.86
CCDC61-201ENST00000536603 NCOA3Q9Y6Q9 1424 aa26.67■■□□□ 1.86
CCDC61-201ENST00000536603 ATF3P18847 181 aa26.67■■□□□ 1.86
CCDC61-201ENST00000536603 SPHKAPQ2M3C7 1700 aa26.66■■□□□ 1.86
CCDC61-201ENST00000536603 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
CCDC61-201ENST00000536603 FOXD1Q16676 465 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
CCDC61-201ENST00000536603 CADPS2Q86UW7 1296 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
CCDC61-201ENST00000536603 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 C19orf44Q9H6X5 657 aa26.64■■□□□ 1.86
CCDC61-201ENST00000536603 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
CCDC61-201ENST00000536603 PIK3R4Q99570 1358 aa26.62■■□□□ 1.85
CCDC61-201ENST00000536603 TRPM2O94759 1503 aa26.62■■□□□ 1.85
CCDC61-201ENST00000536603 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
CCDC61-201ENST00000536603 AMOTL2Q9Y2J4 779 aa26.6■■□□□ 1.85
CCDC61-201ENST00000536603 HRCP23327 699 aa26.59■■□□□ 1.85
CCDC61-201ENST00000536603 SPATA31A6Q5VVP1 1343 aa26.59■■□□□ 1.85
CCDC61-201ENST00000536603 ZNF326Q5BKZ1 582 aaKnown RBP26.56■■□□□ 1.84
CCDC61-201ENST00000536603 CLTCL1P53675 1640 aa26.55■■□□□ 1.84
CCDC61-201ENST00000536603 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
CCDC61-201ENST00000536603 LRP6O75581 1613 aa26.54■■□□□ 1.84
CCDC61-201ENST00000536603 ZNF772Q68DY9 489 aaPredicted RBP26.53■■□□□ 1.84
CCDC61-201ENST00000536603 SHPRHQ149N8 1683 aa26.52■■□□□ 1.84
CCDC61-201ENST00000536603 PTPRUQ92729 1446 aa26.52■■□□□ 1.84
CCDC61-201ENST00000536603 NUTM2BA6NNL0 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 NUTM2EB1AL46 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 BRINP3Q76B58 766 aa26.5■■□□□ 1.83
CCDC61-201ENST00000536603 NUTM2AQ8IVF1 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 KIF1BO60333 1816 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 TRIM26Q12899 539 aaPredicted RBP26.46■■□□□ 1.83
CCDC61-201ENST00000536603 DCCP43146 1447 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 NRXN3Q9Y4C0 1643 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 XRN1Q8IZH2 1706 aaKnown RBP26.45■■□□□ 1.83
CCDC61-201ENST00000536603 CCDC144AA2RUR9 1427 aa26.45■■□□□ 1.82
CCDC61-201ENST00000536603 SETBP1Q9Y6X0 1596 aa26.45■■□□□ 1.82
CCDC61-201ENST00000536603 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
CCDC61-201ENST00000536603 RXRBP28702 533 aa26.41■■□□□ 1.82
CCDC61-201ENST00000536603 METP08581 1390 aa26.41■■□□□ 1.82
CCDC61-201ENST00000536603 MST1RQ04912 1400 aa26.39■■□□□ 1.81
CCDC61-201ENST00000536603 LRRC59Q96AG4 307 aaKnown RBP26.38■■□□□ 1.81
CCDC61-201ENST00000536603 RGL3Q3MIN7 710 aa26.37■■□□□ 1.81
CCDC61-201ENST00000536603 NHSL1Q5SYE7 1610 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.81
CCDC61-201ENST00000536603 AFF2P51816 1311 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 RPGRIP1LQ68CZ1 1315 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 ANKRD30BQ9BXX2 1392 aa26.35■■□□□ 1.81
CCDC61-201ENST00000536603 ADGRL3Q9HAR2 1447 aa26.34■■□□□ 1.81
CCDC61-201ENST00000536603 VGFO15240 615 aaPredicted RBP26.33■■□□□ 1.81
CCDC61-201ENST00000536603 DDX17Q92841 729 aaKnown RBP26.33■■□□□ 1.81
CCDC61-201ENST00000536603 NALCNQ8IZF0 1738 aa26.33■■□□□ 1.81
CCDC61-201ENST00000536603 SPATA31E1Q6ZUB1 1445 aa26.32■■□□□ 1.8
CCDC61-201ENST00000536603 C8orf37Q96NL8 207 aa26.31■■□□□ 1.8
CCDC61-201ENST00000536603 CDK12Q9NYV4 1490 aaPredicted RBP26.26■■□□□ 1.79
CCDC61-201ENST00000536603 PNPLA6Q8IY17 1366 aa26.26■■□□□ 1.79
CCDC61-201ENST00000536603 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
CCDC61-201ENST00000536603 PPLO60437 1756 aa26.25■■□□□ 1.79
CCDC61-201ENST00000536603 C1orf167Q5SNV9 1468 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 ADAMTS2O95450 1211 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 NGLY1Q96IV0 654 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 PCGF6Q9BYE7 350 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms