RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
LINC01089-204ENST00000535643 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
LINC01089-204ENST00000535643 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
LINC01089-204ENST00000535643 CLIP1P30622 1438 aa18.66■□□□□ 0.58
LINC01089-204ENST00000535643 UNC13BO14795 1591 aa18.64■□□□□ 0.58
LINC01089-204ENST00000535643 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
LINC01089-204ENST00000535643 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
LINC01089-204ENST00000535643 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
LINC01089-204ENST00000535643 CAMTA1Q9Y6Y1 1673 aa18.63■□□□□ 0.57
LINC01089-204ENST00000535643 BAG6P46379 1132 aa18.62■□□□□ 0.57
LINC01089-204ENST00000535643 KIF3BO15066 747 aa18.61■□□□□ 0.57
LINC01089-204ENST00000535643 GIGYF1O75420 1035 aaPredicted RBP18.61■□□□□ 0.57
LINC01089-204ENST00000535643 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
LINC01089-204ENST00000535643 NINLQ9Y2I6 1382 aa18.6■□□□□ 0.57
LINC01089-204ENST00000535643 TET3O43151 1660 aa18.58■□□□□ 0.57
LINC01089-204ENST00000535643 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
LINC01089-204ENST00000535643 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.56
LINC01089-204ENST00000535643 ERVK-7P63135 1459 aa18.58■□□□□ 0.56
LINC01089-204ENST00000535643 DHX29Q7Z478 1369 aaKnown RBP18.57■□□□□ 0.56
LINC01089-204ENST00000535643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.57■□□□□ 0.562e-10■□□□□ 10.5
LINC01089-204ENST00000535643 ATF3P18847 181 aa18.56■□□□□ 0.56
LINC01089-204ENST00000535643 C14orf37Q86TY3 774 aa18.56■□□□□ 0.56
LINC01089-204ENST00000535643 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
LINC01089-204ENST00000535643 CAMSAP2Q08AD1 1489 aa18.55■□□□□ 0.56
LINC01089-204ENST00000535643 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
LINC01089-204ENST00000535643 MROH1Q8NDA8 1641 aa18.55■□□□□ 0.56
LINC01089-204ENST00000535643 TMEM2Q9UHN6 1383 aa18.55■□□□□ 0.56
LINC01089-204ENST00000535643 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
LINC01089-204ENST00000535643 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
LINC01089-204ENST00000535643 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
LINC01089-204ENST00000535643 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
LINC01089-204ENST00000535643 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
LINC01089-204ENST00000535643 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.55
LINC01089-204ENST00000535643 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.55
LINC01089-204ENST00000535643 PRELPP51888 382 aa18.51■□□□□ 0.55
LINC01089-204ENST00000535643 RALGAPBQ86X10 1494 aa18.51■□□□□ 0.55
LINC01089-204ENST00000535643 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
LINC01089-204ENST00000535643 KIAA1107Q9UPP5 1409 aa18.5■□□□□ 0.55
LINC01089-204ENST00000535643 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
LINC01089-204ENST00000535643 PTCH1Q13635 1447 aa18.49■□□□□ 0.55
LINC01089-204ENST00000535643 SPHKAPQ2M3C7 1700 aa18.49■□□□□ 0.55
LINC01089-204ENST00000535643 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
LINC01089-204ENST00000535643 GLI3P10071 1580 aa18.45■□□□□ 0.54
LINC01089-204ENST00000535643 SEPT12Q8IYM1 358 aa18.43■□□□□ 0.54
LINC01089-204ENST00000535643 COL13A1Q5TAT6 717 aaPredicted RBP18.42■□□□□ 0.54
LINC01089-204ENST00000535643 SPON1Q9HCB6 807 aa18.42■□□□□ 0.54
LINC01089-204ENST00000535643 CHD4Q14839 1912 aa18.41■□□□□ 0.54
LINC01089-204ENST00000535643 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
LINC01089-204ENST00000535643 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
LINC01089-204ENST00000535643 KRT27Q7Z3Y8 459 aa18.4■□□□□ 0.54
LINC01089-204ENST00000535643 BCANQ96GW7 911 aa18.39■□□□□ 0.53
LINC01089-204ENST00000535643 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
LINC01089-204ENST00000535643 KCNQ2O43526 872 aa18.37■□□□□ 0.53
LINC01089-204ENST00000535643 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
LINC01089-204ENST00000535643 HSPA6P17066 643 aa18.35■□□□□ 0.53
LINC01089-204ENST00000535643 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
LINC01089-204ENST00000535643 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
LINC01089-204ENST00000535643 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
LINC01089-204ENST00000535643 MST1RQ04912 1400 aa18.34■□□□□ 0.53
LINC01089-204ENST00000535643 PPARGC1BQ86YN6 1023 aaKnown RBP18.34■□□□□ 0.53
LINC01089-204ENST00000535643 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
LINC01089-204ENST00000535643 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
LINC01089-204ENST00000535643 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
LINC01089-204ENST00000535643 TNS4Q8IZW8 715 aa18.33■□□□□ 0.52
LINC01089-204ENST00000535643 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
LINC01089-204ENST00000535643 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
LINC01089-204ENST00000535643 UNC5CLQ8IV45 518 aa18.31■□□□□ 0.52
LINC01089-204ENST00000535643 DCCP43146 1447 aa18.31■□□□□ 0.52
LINC01089-204ENST00000535643 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
LINC01089-204ENST00000535643 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
LINC01089-204ENST00000535643 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
LINC01089-204ENST00000535643 CAMKK2Q96RR4 588 aa18.28■□□□□ 0.52
LINC01089-204ENST00000535643 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
LINC01089-204ENST00000535643 MYOM2P54296 1465 aa18.26■□□□□ 0.51
LINC01089-204ENST00000535643 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
LINC01089-204ENST00000535643 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
LINC01089-204ENST00000535643 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
LINC01089-204ENST00000535643 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
LINC01089-204ENST00000535643 ZNF644Q9H582 1327 aaPredicted RBP18.23■□□□□ 0.51
LINC01089-204ENST00000535643 SLIT2O94813 1529 aa18.22■□□□□ 0.51
LINC01089-204ENST00000535643 PLEKHG1Q9ULL1 1385 aa18.2■□□□□ 0.5
LINC01089-204ENST00000535643 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
LINC01089-204ENST00000535643 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
LINC01089-204ENST00000535643 SHANK3Q9BYB0 1731 aa18.2■□□□□ 0.5
LINC01089-204ENST00000535643 TNS1Q9HBL0 1735 aaKnown RBP18.2■□□□□ 0.5
LINC01089-204ENST00000535643 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
LINC01089-204ENST00000535643 IDI1Q13907 227 aa18.19■□□□□ 0.5
LINC01089-204ENST00000535643 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
LINC01089-204ENST00000535643 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
LINC01089-204ENST00000535643 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
LINC01089-204ENST00000535643 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
LINC01089-204ENST00000535643 SYT17Q9BSW7 474 aa18.17■□□□□ 0.5
LINC01089-204ENST00000535643 CEP152O94986 1710 aa18.16■□□□□ 0.5
LINC01089-204ENST00000535643 LAMC1P11047 1609 aa18.16■□□□□ 0.5
LINC01089-204ENST00000535643 PARD3Q8TEW0 1356 aa18.16■□□□□ 0.5
LINC01089-204ENST00000535643 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
LINC01089-204ENST00000535643 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
LINC01089-204ENST00000535643 A0A0G2JS52 829 aa18.15■□□□□ 0.5
LINC01089-204ENST00000535643 MYT1Q01538 1121 aa18.15■□□□□ 0.5
LINC01089-204ENST00000535643 VPS72Q15906 364 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms