RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
COPB1-211ENST00000534234 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
COPB1-211ENST00000534234 STRCP1A6NGW2 1772 aa13.51□□□□□ -0.25
COPB1-211ENST00000534234 UNC13BO14795 1591 aa13.51□□□□□ -0.25
COPB1-211ENST00000534234 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
COPB1-211ENST00000534234 NUTM2DQ5VT03 806 aaPredicted RBP13.5□□□□□ -0.25
COPB1-211ENST00000534234 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
COPB1-211ENST00000534234 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
COPB1-211ENST00000534234 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
COPB1-211ENST00000534234 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
COPB1-211ENST00000534234 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
COPB1-211ENST00000534234 TBX22Q9Y458 520 aa13.49□□□□□ -0.25
COPB1-211ENST00000534234 IQGAP3Q86VI3 1631 aa13.47□□□□□ -0.25
COPB1-211ENST00000534234 SOCS7O14512 581 aa13.46□□□□□ -0.25
COPB1-211ENST00000534234 TMEM131LA2VDJ0 1609 aa13.45□□□□□ -0.26
COPB1-211ENST00000534234 E9PCH4 1651 aa13.45□□□□□ -0.26
COPB1-211ENST00000534234 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
COPB1-211ENST00000534234 TRIM52Q96A61 297 aa13.45□□□□□ -0.26
COPB1-211ENST00000534234 NAIPQ13075 1403 aa13.44□□□□□ -0.26
COPB1-211ENST00000534234 ZNF326Q5BKZ1 582 aaKnown RBP13.44□□□□□ -0.26
COPB1-211ENST00000534234 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
COPB1-211ENST00000534234 NKTRP30414 1462 aaKnown RBP13.41□□□□□ -0.26
COPB1-211ENST00000534234 ADAMTS13Q76LX8 1427 aa13.41□□□□□ -0.26
COPB1-211ENST00000534234 MSH6P52701 1360 aa13.41□□□□□ -0.26
COPB1-211ENST00000534234 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
COPB1-211ENST00000534234 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
COPB1-211ENST00000534234 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
COPB1-211ENST00000534234 HFM1A2PYH4 1435 aa13.39□□□□□ -0.27
COPB1-211ENST00000534234 PIK3R4Q99570 1358 aa13.39□□□□□ -0.27
COPB1-211ENST00000534234 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
COPB1-211ENST00000534234 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
COPB1-211ENST00000534234 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
COPB1-211ENST00000534234 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
COPB1-211ENST00000534234 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
COPB1-211ENST00000534234 XIRP1Q702N8 1843 aaKnown RBP13.37□□□□□ -0.27
COPB1-211ENST00000534234 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
COPB1-211ENST00000534234 ATF3P18847 181 aa13.36□□□□□ -0.27
COPB1-211ENST00000534234 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
COPB1-211ENST00000534234 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
COPB1-211ENST00000534234 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
COPB1-211ENST00000534234 DIP2AQ14689 1571 aa13.33□□□□□ -0.28
COPB1-211ENST00000534234 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
COPB1-211ENST00000534234 METP08581 1390 aa13.32□□□□□ -0.28
COPB1-211ENST00000534234 TRPM2O94759 1503 aa13.32□□□□□ -0.28
COPB1-211ENST00000534234 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
COPB1-211ENST00000534234 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
COPB1-211ENST00000534234 ROBO1Q9Y6N7 1651 aa13.3□□□□□ -0.28
COPB1-211ENST00000534234 MPHOSPH9Q99550 1183 aa13.3□□□□□ -0.28
COPB1-211ENST00000534234 RGS17Q9UGC6 210 aaPredicted RBP13.3□□□□□ -0.28
COPB1-211ENST00000534234 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
COPB1-211ENST00000534234 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
COPB1-211ENST00000534234 NEXMIFQ5QGS0 1516 aa13.27□□□□□ -0.28
COPB1-211ENST00000534234 JCADQ9P266 1359 aa13.27□□□□□ -0.28
COPB1-211ENST00000534234 RGL3Q3MIN7 710 aa13.27□□□□□ -0.29
COPB1-211ENST00000534234 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
COPB1-211ENST00000534234 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
COPB1-211ENST00000534234 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
COPB1-211ENST00000534234 CCDC144AA2RUR9 1427 aa13.24□□□□□ -0.29
COPB1-211ENST00000534234 DCCP43146 1447 aa13.24□□□□□ -0.29
COPB1-211ENST00000534234 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
COPB1-211ENST00000534234 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
COPB1-211ENST00000534234 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
COPB1-211ENST00000534234 SPATA31A6Q5VVP1 1343 aa13.22□□□□□ -0.29
COPB1-211ENST00000534234 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
COPB1-211ENST00000534234 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
COPB1-211ENST00000534234 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
COPB1-211ENST00000534234 MST1RQ04912 1400 aa13.21□□□□□ -0.29
COPB1-211ENST00000534234 ROBO2Q9HCK4 1378 aa13.21□□□□□ -0.29
COPB1-211ENST00000534234 KIF1BO60333 1816 aa13.21□□□□□ -0.3
COPB1-211ENST00000534234 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
COPB1-211ENST00000534234 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
COPB1-211ENST00000534234 LRRC59Q96AG4 307 aaKnown RBP13.2□□□□□ -0.3
COPB1-211ENST00000534234 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
COPB1-211ENST00000534234 ANKRD30BQ9BXX2 1392 aa13.19□□□□□ -0.3
COPB1-211ENST00000534234 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
COPB1-211ENST00000534234 STK26Q9P289 416 aa13.19□□□□□ -0.3
COPB1-211ENST00000534234 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
COPB1-211ENST00000534234 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
COPB1-211ENST00000534234 AHDC1Q5TGY3 1603 aaPredicted RBP13.18□□□□□ -0.3
COPB1-211ENST00000534234 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
COPB1-211ENST00000534234 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
COPB1-211ENST00000534234 NUTM2AQ8IVF1 878 aaPredicted RBP13.18□□□□□ -0.3
COPB1-211ENST00000534234 TMEM132EQ6IEE7 984 aa13.17□□□□□ -0.3
COPB1-211ENST00000534234 ORAI2Q96SN7 254 aa13.17□□□□□ -0.3
COPB1-211ENST00000534234 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
COPB1-211ENST00000534234 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
COPB1-211ENST00000534234 C1orf167Q5SNV9 1468 aa13.16□□□□□ -0.3
COPB1-211ENST00000534234 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
COPB1-211ENST00000534234 ZNF772Q68DY9 489 aaPredicted RBP13.15□□□□□ -0.3
COPB1-211ENST00000534234 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
COPB1-211ENST00000534234 LRP6O75581 1613 aa13.14□□□□□ -0.31
COPB1-211ENST00000534234 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
COPB1-211ENST00000534234 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
COPB1-211ENST00000534234 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
COPB1-211ENST00000534234 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
COPB1-211ENST00000534234 PPLO60437 1756 aa13.12□□□□□ -0.31
COPB1-211ENST00000534234 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
COPB1-211ENST00000534234 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
COPB1-211ENST00000534234 PIK3C2GO75747 1445 aa13.11□□□□□ -0.31
COPB1-211ENST00000534234 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms