RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SLC52A1Q9NWF4 448 aa14.66□□□□□ -0.06
SSBP3-215ENST00000533946 CPS1P31327 1500 aa14.66□□□□□ -0.06
SSBP3-215ENST00000533946 EID1Q9Y6B2 187 aa14.65□□□□□ -0.06
SSBP3-215ENST00000533946 RIMS2Q9UQ26 1411 aa14.65□□□□□ -0.06
SSBP3-215ENST00000533946 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
SSBP3-215ENST00000533946 HSPA1LP34931 641 aa14.63□□□□□ -0.07
SSBP3-215ENST00000533946 SPHKAPQ2M3C7 1700 aa14.63□□□□□ -0.07
SSBP3-215ENST00000533946 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
SSBP3-215ENST00000533946 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
SSBP3-215ENST00000533946 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
SSBP3-215ENST00000533946 BCANQ96GW7 911 aa14.6□□□□□ -0.07
SSBP3-215ENST00000533946 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
SSBP3-215ENST00000533946 ILDR2Q71H61 639 aa14.59□□□□□ -0.07
SSBP3-215ENST00000533946 TMEM94Q12767 1356 aa14.58□□□□□ -0.08
SSBP3-215ENST00000533946 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
SSBP3-215ENST00000533946 NRXN3Q9Y4C0 1643 aa14.57□□□□□ -0.08
SSBP3-215ENST00000533946 KCNA6P17658 529 aa14.57□□□□□ -0.08
SSBP3-215ENST00000533946 CHD2O14647 1828 aaKnown RBP14.57□□□□□ -0.08
SSBP3-215ENST00000533946 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
SSBP3-215ENST00000533946 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-215ENST00000533946 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-215ENST00000533946 NWD1Q149M9 1564 aa14.55□□□□□ -0.08
SSBP3-215ENST00000533946 TOM1O60784 492 aa14.54□□□□□ -0.08
SSBP3-215ENST00000533946 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
SSBP3-215ENST00000533946 TRPM2O94759 1503 aa14.54□□□□□ -0.08
SSBP3-215ENST00000533946 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
SSBP3-215ENST00000533946 NEXMIFQ5QGS0 1516 aa14.52□□□□□ -0.08
SSBP3-215ENST00000533946 ZNF326Q5BKZ1 582 aaKnown RBP14.52□□□□□ -0.09
SSBP3-215ENST00000533946 METP08581 1390 aa14.51□□□□□ -0.09
SSBP3-215ENST00000533946 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
SSBP3-215ENST00000533946 MPHOSPH9Q99550 1183 aa14.5□□□□□ -0.09
SSBP3-215ENST00000533946 KIF1BO60333 1816 aa14.49□□□□□ -0.09
SSBP3-215ENST00000533946 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.48□□□□□ -0.09
SSBP3-215ENST00000533946 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
SSBP3-215ENST00000533946 NKTRP30414 1462 aaKnown RBP14.46□□□□□ -0.09
SSBP3-215ENST00000533946 SETD5Q9C0A6 1442 aa14.46□□□□□ -0.09
SSBP3-215ENST00000533946 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.09
SSBP3-215ENST00000533946 SETD1AO15047 1707 aaKnown RBP14.46□□□□□ -0.1
SSBP3-215ENST00000533946 RAB3GAP2Q9H2M9 1393 aa14.46□□□□□ -0.1
SSBP3-215ENST00000533946 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.1
SSBP3-215ENST00000533946 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
SSBP3-215ENST00000533946 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
SSBP3-215ENST00000533946 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-215ENST00000533946 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-215ENST00000533946 ADGRF5Q8IZF2 1346 aa14.43□□□□□ -0.1
SSBP3-215ENST00000533946 PPLO60437 1756 aa14.43□□□□□ -0.1
SSBP3-215ENST00000533946 HDGFP51858 240 aaKnown RBP14.43□□□□□ -0.1
SSBP3-215ENST00000533946 SPATA31E1Q6ZUB1 1445 aa14.42□□□□□ -0.1
SSBP3-215ENST00000533946 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
SSBP3-215ENST00000533946 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
SSBP3-215ENST00000533946 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
SSBP3-215ENST00000533946 MSH6P52701 1360 aa14.39□□□□□ -0.11
SSBP3-215ENST00000533946 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
SSBP3-215ENST00000533946 ROBO2Q9HCK4 1378 aa14.38□□□□□ -0.11
SSBP3-215ENST00000533946 C14orf37Q86TY3 774 aa14.38□□□□□ -0.11
SSBP3-215ENST00000533946 DDX17Q92841 729 aaKnown RBP14.38□□□□□ -0.11
SSBP3-215ENST00000533946 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
SSBP3-215ENST00000533946 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
SSBP3-215ENST00000533946 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
SSBP3-215ENST00000533946 RGS17Q9UGC6 210 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-215ENST00000533946 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
SSBP3-215ENST00000533946 CCDC144AA2RUR9 1427 aa14.36□□□□□ -0.11
SSBP3-215ENST00000533946 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
SSBP3-215ENST00000533946 PHLPP1O60346 1717 aa14.35□□□□□ -0.11
SSBP3-215ENST00000533946 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-215ENST00000533946 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.11
SSBP3-215ENST00000533946 STK26Q9P289 416 aa14.33□□□□□ -0.12
SSBP3-215ENST00000533946 PLEKHH1Q9ULM0 1364 aa14.33□□□□□ -0.12
SSBP3-215ENST00000533946 MST1RQ04912 1400 aa14.32□□□□□ -0.12
SSBP3-215ENST00000533946 BRINP3Q76B58 766 aa14.32□□□□□ -0.12
SSBP3-215ENST00000533946 WAPLQ7Z5K2 1190 aa14.32□□□□□ -0.12
SSBP3-215ENST00000533946 RPGRIP1LQ68CZ1 1315 aa14.32□□□□□ -0.12
SSBP3-215ENST00000533946 ANKRD30BQ9BXX2 1392 aa14.32□□□□□ -0.12
SSBP3-215ENST00000533946 ATF3P18847 181 aa14.31□□□□□ -0.12
SSBP3-215ENST00000533946 NCOA3Q9Y6Q9 1424 aa14.31□□□□□ -0.12
SSBP3-215ENST00000533946 CFAP70Q5T0N1 1121 aa14.3□□□□□ -0.12
SSBP3-215ENST00000533946 ADGRL3Q9HAR2 1447 aa14.3□□□□□ -0.12
SSBP3-215ENST00000533946 LRP6O75581 1613 aa14.29□□□□□ -0.12
SSBP3-215ENST00000533946 PIK3C2GO75747 1445 aa14.28□□□□□ -0.12
SSBP3-215ENST00000533946 CADPS2Q86UW7 1296 aa14.28□□□□□ -0.12
SSBP3-215ENST00000533946 ORAI2Q96SN7 254 aa14.28□□□□□ -0.12
SSBP3-215ENST00000533946 NUTM2FA1L443 756 aa14.27□□□□□ -0.13
SSBP3-215ENST00000533946 POTEAQ6S8J7 498 aa14.27□□□□□ -0.13
SSBP3-215ENST00000533946 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
SSBP3-215ENST00000533946 AHDC1Q5TGY3 1603 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-215ENST00000533946 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
SSBP3-215ENST00000533946 PTCH1Q13635 1447 aa14.25□□□□□ -0.13
SSBP3-215ENST00000533946 DHX57Q6P158 1386 aaKnown RBP14.25□□□□□ -0.13
SSBP3-215ENST00000533946 SOCS7O14512 581 aa14.25□□□□□ -0.13
SSBP3-215ENST00000533946 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
SSBP3-215ENST00000533946 NHSL1Q5SYE7 1610 aa14.24□□□□□ -0.13
SSBP3-215ENST00000533946 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-215ENST00000533946 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
SSBP3-215ENST00000533946 DCCP43146 1447 aa14.23□□□□□ -0.13
SSBP3-215ENST00000533946 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
SSBP3-215ENST00000533946 YTHDC2Q9H6S0 1430 aaKnown RBP14.23□□□□□ -0.13
SSBP3-215ENST00000533946 LRPPRCP42704 1394 aaKnown RBP14.22□□□□□ -0.13
SSBP3-215ENST00000533946 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
SSBP3-215ENST00000533946 JCADQ9P266 1359 aa14.22□□□□□ -0.13
SSBP3-215ENST00000533946 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms