RNA–Protein interactions for RNA: ENST00000532909.5

CHID1-220, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-220ENST00000532909 NOS1P29475 1434 aa29.06■■■□□ 2.24
CHID1-220ENST00000532909 NUP155O75694 1391 aa29.05■■■□□ 2.24
CHID1-220ENST00000532909 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
CHID1-220ENST00000532909 SLC52A1Q9NWF4 448 aa29.02■■■□□ 2.24
CHID1-220ENST00000532909 MPHOSPH9Q99550 1183 aa29.01■■■□□ 2.23
CHID1-220ENST00000532909 KDM5AP29375 1690 aaKnown RBP29■■■□□ 2.23
CHID1-220ENST00000532909 SLC4A1APQ9BWU0 796 aaKnown RBP29■■■□□ 2.23
CHID1-220ENST00000532909 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
CHID1-220ENST00000532909 RPRD2Q5VT52 1461 aaKnown RBP28.99■■■□□ 2.23
CHID1-220ENST00000532909 IQGAP3Q86VI3 1631 aa28.99■■■□□ 2.23
CHID1-220ENST00000532909 ALKQ9UM73 1620 aa28.99■■■□□ 2.23
CHID1-220ENST00000532909 BCANQ96GW7 911 aa28.99■■■□□ 2.23
CHID1-220ENST00000532909 SLC26A8Q96RN1 970 aa28.98■■■□□ 2.23
CHID1-220ENST00000532909 TET3O43151 1660 aa28.96■■■□□ 2.23
CHID1-220ENST00000532909 SOCS7O14512 581 aa28.94■■■□□ 2.22
CHID1-220ENST00000532909 CHGAP10645 457 aaKnown RBP28.92■■■□□ 2.22
CHID1-220ENST00000532909 PPP1R15AO75807 674 aaPredicted RBP28.9■■■□□ 2.22
CHID1-220ENST00000532909 KCNA6P17658 529 aa28.89■■■□□ 2.22
CHID1-220ENST00000532909 PROSER2Q86WR7 435 aaPredicted RBP28.87■■■□□ 2.21
CHID1-220ENST00000532909 TIMELESSQ9UNS1 1208 aa28.87■■■□□ 2.21
CHID1-220ENST00000532909 MED1Q15648 1581 aaPredicted RBP28.87■■■□□ 2.21
CHID1-220ENST00000532909 TMEM94Q12767 1356 aa28.87■■■□□ 2.21
CHID1-220ENST00000532909 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
CHID1-220ENST00000532909 RBM33Q96EV2 1170 aaKnown RBP28.85■■■□□ 2.21
CHID1-220ENST00000532909 RIMS2Q9UQ26 1411 aa28.85■■■□□ 2.21
CHID1-220ENST00000532909 XIRP1Q702N8 1843 aaKnown RBP28.84■■■□□ 2.21
CHID1-220ENST00000532909 E9PCH4 1651 aa28.83■■■□□ 2.21
CHID1-220ENST00000532909 MYO5BQ9ULV0 1848 aa28.83■■■□□ 2.21
CHID1-220ENST00000532909 ZFYVE9O95405 1425 aa28.83■■■□□ 2.21
CHID1-220ENST00000532909 TMEM131LA2VDJ0 1609 aa28.81■■■□□ 2.2
CHID1-220ENST00000532909 PLEKHG1Q9ULL1 1385 aa28.8■■■□□ 2.2
CHID1-220ENST00000532909 NUTM2DQ5VT03 806 aaPredicted RBP28.79■■■□□ 2.2
CHID1-220ENST00000532909 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
CHID1-220ENST00000532909 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
CHID1-220ENST00000532909 ANKRD30BQ9BXX2 1392 aa28.77■■■□□ 2.2
CHID1-220ENST00000532909 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
CHID1-220ENST00000532909 NWD1Q149M9 1564 aa28.74■■■□□ 2.19
CHID1-220ENST00000532909 MSH6P52701 1360 aa28.71■■■□□ 2.19
CHID1-220ENST00000532909 FAM135BQ49AJ0 1406 aa28.7■■■□□ 2.19
CHID1-220ENST00000532909 TBX22Q9Y458 520 aa28.7■■■□□ 2.18
CHID1-220ENST00000532909 CCDC144AA2RUR9 1427 aa28.66■■■□□ 2.18
CHID1-220ENST00000532909 C14orf37Q86TY3 774 aa28.65■■■□□ 2.18
CHID1-220ENST00000532909 CHD2O14647 1828 aaKnown RBP28.64■■■□□ 2.18
CHID1-220ENST00000532909 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
CHID1-220ENST00000532909 TRPM2O94759 1503 aa28.64■■■□□ 2.17
CHID1-220ENST00000532909 TONSLQ96HA7 1378 aa28.63■■■□□ 2.17
CHID1-220ENST00000532909 ROBO1Q9Y6N7 1651 aa28.63■■■□□ 2.17
CHID1-220ENST00000532909 ZNF326Q5BKZ1 582 aaKnown RBP28.62■■■□□ 2.17
CHID1-220ENST00000532909 SLAIN2Q9P270 581 aa28.61■■■□□ 2.17
CHID1-220ENST00000532909 FOXD1Q16676 465 aa28.6■■■□□ 2.17
CHID1-220ENST00000532909 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
CHID1-220ENST00000532909 DIP2AQ14689 1571 aa28.59■■■□□ 2.17
CHID1-220ENST00000532909 NEUROD1Q13562 356 aa28.57■■■□□ 2.16
CHID1-220ENST00000532909 PIK3R4Q99570 1358 aa28.57■■■□□ 2.16
CHID1-220ENST00000532909 SIN3AQ96ST3 1273 aa28.56■■■□□ 2.16
CHID1-220ENST00000532909 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
CHID1-220ENST00000532909 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
CHID1-220ENST00000532909 STAC3Q96MF2 364 aa28.52■■■□□ 2.16
CHID1-220ENST00000532909 ATF3P18847 181 aa28.5■■■□□ 2.15
CHID1-220ENST00000532909 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
CHID1-220ENST00000532909 PTPRUQ92729 1446 aa28.49■■■□□ 2.15
CHID1-220ENST00000532909 CLTCL1P53675 1640 aa28.48■■■□□ 2.15
CHID1-220ENST00000532909 CADPS2Q86UW7 1296 aa28.48■■■□□ 2.15
CHID1-220ENST00000532909 PHLPP1O60346 1717 aa28.46■■■□□ 2.15
CHID1-220ENST00000532909 RGS17Q9UGC6 210 aaPredicted RBP28.46■■■□□ 2.15
CHID1-220ENST00000532909 SETBP1Q9Y6X0 1596 aa28.45■■■□□ 2.14
CHID1-220ENST00000532909 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.44■■■□□ 2.14
CHID1-220ENST00000532909 NRXN3Q9Y4C0 1643 aa28.43■■■□□ 2.14
CHID1-220ENST00000532909 METP08581 1390 aa28.41■■■□□ 2.14
CHID1-220ENST00000532909 JCADQ9P266 1359 aa28.41■■■□□ 2.14
CHID1-220ENST00000532909 NEXMIFQ5QGS0 1516 aa28.4■■■□□ 2.14
CHID1-220ENST00000532909 KIF1BO60333 1816 aa28.39■■■□□ 2.14
CHID1-220ENST00000532909 XRN1Q8IZH2 1706 aaKnown RBP28.38■■■□□ 2.13
CHID1-220ENST00000532909 SPATA31E1Q6ZUB1 1445 aa28.36■■■□□ 2.13
CHID1-220ENST00000532909 L3MBTL2Q969R5 705 aa28.36■■■□□ 2.13
CHID1-220ENST00000532909 RPGRIP1LQ68CZ1 1315 aa28.35■■■□□ 2.13
CHID1-220ENST00000532909 COL16A1Q07092 1604 aaPredicted RBP28.35■■■□□ 2.13
CHID1-220ENST00000532909 VGFO15240 615 aaPredicted RBP28.33■■■□□ 2.13
CHID1-220ENST00000532909 POTEAQ6S8J7 498 aa28.33■■■□□ 2.13
CHID1-220ENST00000532909 BRINP3Q76B58 766 aa28.33■■■□□ 2.13
CHID1-220ENST00000532909 DCCP43146 1447 aa28.33■■■□□ 2.13
CHID1-220ENST00000532909 AHDC1Q5TGY3 1603 aaPredicted RBP28.29■■■□□ 2.12
CHID1-220ENST00000532909 MEX3CQ5U5Q3 659 aaKnown RBP28.28■■■□□ 2.12
CHID1-220ENST00000532909 SPATA31A6Q5VVP1 1343 aa28.26■■■□□ 2.11
CHID1-220ENST00000532909 MST1RQ04912 1400 aa28.26■■■□□ 2.11
CHID1-220ENST00000532909 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.11
CHID1-220ENST00000532909 ASXL1Q8IXJ9 1541 aa28.24■■■□□ 2.11
CHID1-220ENST00000532909 DCAF11Q8TEB1 546 aa28.24■■■□□ 2.11
CHID1-220ENST00000532909 MYOM2P54296 1465 aa28.22■■■□□ 2.11
CHID1-220ENST00000532909 RGL3Q3MIN7 710 aa28.22■■■□□ 2.11
CHID1-220ENST00000532909 LRP6O75581 1613 aa28.21■■■□□ 2.11
CHID1-220ENST00000532909 NUTM2BA6NNL0 878 aaPredicted RBP28.2■■■□□ 2.1
CHID1-220ENST00000532909 NUTM2EB1AL46 878 aaPredicted RBP28.2■■■□□ 2.1
CHID1-220ENST00000532909 NUTM2AQ8IVF1 878 aaPredicted RBP28.2■■■□□ 2.1
CHID1-220ENST00000532909 NALCNQ8IZF0 1738 aa28.2■■■□□ 2.1
CHID1-220ENST00000532909 ROBO2Q9HCK4 1378 aa28.19■■■□□ 2.1
CHID1-220ENST00000532909 SHPRHQ149N8 1683 aa28.18■■■□□ 2.1
CHID1-220ENST00000532909 PTCH1Q13635 1447 aa28.18■■■□□ 2.1
CHID1-220ENST00000532909 PPLO60437 1756 aa28.17■■■□□ 2.1
CHID1-220ENST00000532909 DDX17Q92841 729 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms