RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
CTSB-226ENST00000532656 GCC2Q8IWJ2 1684 aa26.54■■□□□ 1.84
CTSB-226ENST00000532656 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
CTSB-226ENST00000532656 NKTRP30414 1462 aaKnown RBP26.53■■□□□ 1.84
CTSB-226ENST00000532656 ZFYVE9O95405 1425 aa26.52■■□□□ 1.84
CTSB-226ENST00000532656 ROBO1Q9Y6N7 1651 aa26.51■■□□□ 1.83
CTSB-226ENST00000532656 UNC13BO14795 1591 aa26.5■■□□□ 1.83
CTSB-226ENST00000532656 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
CTSB-226ENST00000532656 TMEM131LA2VDJ0 1609 aa26.49■■□□□ 1.83
CTSB-226ENST00000532656 PLEKHG1Q9ULL1 1385 aa26.48■■□□□ 1.83
CTSB-226ENST00000532656 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
CTSB-226ENST00000532656 RGS17Q9UGC6 210 aaPredicted RBP26.47■■□□□ 1.83
CTSB-226ENST00000532656 MSH6P52701 1360 aa26.46■■□□□ 1.83
CTSB-226ENST00000532656 E9PCH4 1651 aa26.45■■□□□ 1.82
CTSB-226ENST00000532656 CHGAP10645 457 aaKnown RBP26.45■■□□□ 1.82
CTSB-226ENST00000532656 CHD2O14647 1828 aaKnown RBP26.44■■□□□ 1.82
CTSB-226ENST00000532656 HDGFP51858 240 aaKnown RBP26.42■■□□□ 1.82
CTSB-226ENST00000532656 ROCK1Q13464 1354 aa26.41■■□□□ 1.82
CTSB-226ENST00000532656 IQGAP3Q86VI3 1631 aa26.4■■□□□ 1.82
CTSB-226ENST00000532656 NUTM2DQ5VT03 806 aaPredicted RBP26.39■■□□□ 1.82
CTSB-226ENST00000532656 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
CTSB-226ENST00000532656 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.37■■□□□ 1.81
CTSB-226ENST00000532656 ITGAEP38570 1179 aa26.36■■□□□ 1.81
CTSB-226ENST00000532656 TBX22Q9Y458 520 aa26.36■■□□□ 1.81
CTSB-226ENST00000532656 PHLPP1O60346 1717 aa26.36■■□□□ 1.81
CTSB-226ENST00000532656 NUP155O75694 1391 aa26.34■■□□□ 1.81
CTSB-226ENST00000532656 ADAMTS13Q76LX8 1427 aa26.34■■□□□ 1.81
CTSB-226ENST00000532656 POTEAQ6S8J7 498 aa26.32■■□□□ 1.8
CTSB-226ENST00000532656 DIP2AQ14689 1571 aa26.32■■□□□ 1.8
CTSB-226ENST00000532656 C14orf37Q86TY3 774 aa26.31■■□□□ 1.8
CTSB-226ENST00000532656 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
CTSB-226ENST00000532656 NCOA3Q9Y6Q9 1424 aa26.29■■□□□ 1.8
CTSB-226ENST00000532656 JCADQ9P266 1359 aa26.27■■□□□ 1.8
CTSB-226ENST00000532656 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.26■■□□□ 1.79
CTSB-226ENST00000532656 COL16A1Q07092 1604 aaPredicted RBP26.26■■□□□ 1.79
CTSB-226ENST00000532656 PIK3R4Q99570 1358 aa26.26■■□□□ 1.79
CTSB-226ENST00000532656 TRPM2O94759 1503 aa26.25■■□□□ 1.79
CTSB-226ENST00000532656 PTPRUQ92729 1446 aa26.22■■□□□ 1.79
CTSB-226ENST00000532656 SPHKAPQ2M3C7 1700 aa26.22■■□□□ 1.79
CTSB-226ENST00000532656 AMOTL2Q9Y2J4 779 aa26.22■■□□□ 1.79
CTSB-226ENST00000532656 ATF3P18847 181 aa26.21■■□□□ 1.79
CTSB-226ENST00000532656 CADPS2Q86UW7 1296 aa26.21■■□□□ 1.79
CTSB-226ENST00000532656 C19orf44Q9H6X5 657 aa26.21■■□□□ 1.79
CTSB-226ENST00000532656 NRXN3Q9Y4C0 1643 aa26.18■■□□□ 1.78
CTSB-226ENST00000532656 AHDC1Q5TGY3 1603 aaPredicted RBP26.17■■□□□ 1.78
CTSB-226ENST00000532656 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
CTSB-226ENST00000532656 LRP6O75581 1613 aa26.16■■□□□ 1.78
CTSB-226ENST00000532656 SETBP1Q9Y6X0 1596 aa26.16■■□□□ 1.78
CTSB-226ENST00000532656 SETD1AO15047 1707 aaKnown RBP26.14■■□□□ 1.78
CTSB-226ENST00000532656 XRN1Q8IZH2 1706 aaKnown RBP26.14■■□□□ 1.78
CTSB-226ENST00000532656 SPATA31A6Q5VVP1 1343 aa26.13■■□□□ 1.77
CTSB-226ENST00000532656 CLTCL1P53675 1640 aa26.11■■□□□ 1.77
CTSB-226ENST00000532656 MEX3CQ5U5Q3 659 aaKnown RBP26.11■■□□□ 1.77
CTSB-226ENST00000532656 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
CTSB-226ENST00000532656 SHPRHQ149N8 1683 aa26.11■■□□□ 1.77
CTSB-226ENST00000532656 DCCP43146 1447 aa26.1■■□□□ 1.77
CTSB-226ENST00000532656 METP08581 1390 aa26.09■■□□□ 1.77
CTSB-226ENST00000532656 NEXMIFQ5QGS0 1516 aa26.07■■□□□ 1.76
CTSB-226ENST00000532656 ASXL1Q8IXJ9 1541 aa26.06■■□□□ 1.76
CTSB-226ENST00000532656 MST1RQ04912 1400 aa26.05■■□□□ 1.76
CTSB-226ENST00000532656 NAIPQ13075 1403 aa26.04■■□□□ 1.76
CTSB-226ENST00000532656 RRBP1Q9P2E9 1410 aaKnown RBP26.04■■□□□ 1.76
CTSB-226ENST00000532656 KIF1BO60333 1816 aa26.02■■□□□ 1.76
CTSB-226ENST00000532656 NUTM2BA6NNL0 878 aaPredicted RBP26.02■■□□□ 1.76
CTSB-226ENST00000532656 NUTM2EB1AL46 878 aaPredicted RBP26.02■■□□□ 1.76
CTSB-226ENST00000532656 NUTM2AQ8IVF1 878 aaPredicted RBP26.02■■□□□ 1.76
CTSB-226ENST00000532656 ZNF772Q68DY9 489 aaPredicted RBP26.01■■□□□ 1.75
CTSB-226ENST00000532656 NALCNQ8IZF0 1738 aa26■■□□□ 1.75
CTSB-226ENST00000532656 NHSL1Q5SYE7 1610 aa26■■□□□ 1.75
CTSB-226ENST00000532656 ADGRL3Q9HAR2 1447 aa26■■□□□ 1.75
CTSB-226ENST00000532656 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
CTSB-226ENST00000532656 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
CTSB-226ENST00000532656 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
CTSB-226ENST00000532656 LRRC59Q96AG4 307 aaKnown RBP25.91■■□□□ 1.74
CTSB-226ENST00000532656 AFF2P51816 1311 aa25.9■■□□□ 1.74
CTSB-226ENST00000532656 HFM1A2PYH4 1435 aa25.9■■□□□ 1.74
CTSB-226ENST00000532656 VGFO15240 615 aaPredicted RBP25.9■■□□□ 1.74
CTSB-226ENST00000532656 RXRBP28702 533 aa25.9■■□□□ 1.74
CTSB-226ENST00000532656 PTCH1Q13635 1447 aa25.89■■□□□ 1.74
CTSB-226ENST00000532656 C1orf167Q5SNV9 1468 aa25.89■■□□□ 1.73
CTSB-226ENST00000532656 PNPLA6Q8IY17 1366 aa25.88■■□□□ 1.73
CTSB-226ENST00000532656 ROBO2Q9HCK4 1378 aa25.88■■□□□ 1.73
CTSB-226ENST00000532656 SLC4A1APQ9BWU0 796 aaKnown RBP25.88■■□□□ 1.73
CTSB-226ENST00000532656 UPF1Q92900 1129 aaKnown RBP eCLIP25.86■■□□□ 1.73
CTSB-226ENST00000532656 C8orf37Q96NL8 207 aa25.85■■□□□ 1.73
CTSB-226ENST00000532656 PPLO60437 1756 aa25.84■■□□□ 1.73
CTSB-226ENST00000532656 RPGRIP1LQ68CZ1 1315 aa25.83■■□□□ 1.73
CTSB-226ENST00000532656 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
CTSB-226ENST00000532656 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
CTSB-226ENST00000532656 LAMC1P11047 1609 aa25.81■■□□□ 1.72
CTSB-226ENST00000532656 FOXD1Q16676 465 aa25.8■■□□□ 1.72
CTSB-226ENST00000532656 PRAG1Q86YV5 1406 aa25.8■■□□□ 1.72
CTSB-226ENST00000532656 ADAMTS2O95450 1211 aa25.77■■□□□ 1.72
CTSB-226ENST00000532656 QTRT2Q9H974 415 aaKnown RBP25.77■■□□□ 1.72
CTSB-226ENST00000532656 SOS2Q07890 1332 aaPredicted RBP25.76■■□□□ 1.71
CTSB-226ENST00000532656 RGS12O14924 1447 aa25.74■■□□□ 1.71
CTSB-226ENST00000532656 NGLY1Q96IV0 654 aa25.74■■□□□ 1.71
CTSB-226ENST00000532656 ADGRF5Q8IZF2 1346 aa25.72■■□□□ 1.71
CTSB-226ENST00000532656 RBM6P78332 1123 aaKnown RBP25.72■■□□□ 1.71
CTSB-226ENST00000532656 CCDC144AA2RUR9 1427 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms