RNA–Protein interactions for RNA: ENST00000532424.5

FAM208B-213, Transcript of family with sequence similarity 208 member B, human

TSL 3

Gene FAM208B, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM208B-213	ENST00000532424	LRP6	O75581	1613 aa		32.79	■■■□□ 2.84
FAM208B-213	ENST00000532424	DAPK1	P53355	1430 aa		32.77	■■■□□ 2.84
FAM208B-213	ENST00000532424	CHD2	O14647	1828 aa	Known RBP	32.77	■■■□□ 2.84
FAM208B-213	ENST00000532424	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
FAM208B-213	ENST00000532424	FGD6	Q6ZV73	1430 aa		32.74	■■■□□ 2.83
FAM208B-213	ENST00000532424	SPATA31A6	Q5VVP1	1343 aa		32.73	■■■□□ 2.83
FAM208B-213	ENST00000532424	SLC52A1	Q9NWF4	448 aa		32.72	■■■□□ 2.83
FAM208B-213	ENST00000532424	MEX3C	Q5U5Q3	659 aa	Known RBP	32.71	■■■□□ 2.83
FAM208B-213	ENST00000532424	PLEKHG1	Q9ULL1	1385 aa		32.7	■■■□□ 2.83
FAM208B-213	ENST00000532424	ZFYVE9	O95405	1425 aa		32.7	■■■□□ 2.83
FAM208B-213	ENST00000532424	ZNF772	Q68DY9	489 aa	Predicted RBP	32.7	■■■□□ 2.83
FAM208B-213	ENST00000532424	MYO5B	Q9ULV0	1848 aa		32.7	■■■□□ 2.82
FAM208B-213	ENST00000532424	TRIM52	Q96A61	297 aa		32.69	■■■□□ 2.82
FAM208B-213	ENST00000532424	ANKRD30A	Q9BXX3	1397 aa		32.69	■■■□□ 2.82
FAM208B-213	ENST00000532424	SHPRH	Q149N8	1683 aa		32.69	■■■□□ 2.82
FAM208B-213	ENST00000532424	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.67	■■■□□ 2.82
FAM208B-213	ENST00000532424	GCC2	Q8IWJ2	1684 aa		32.66	■■■□□ 2.82
FAM208B-213	ENST00000532424	NCOA3	Q9Y6Q9	1424 aa		32.66	■■■□□ 2.82
FAM208B-213	ENST00000532424	PPP1R15A	O75807	674 aa	Predicted RBP	32.64	■■■□□ 2.82
FAM208B-213	ENST00000532424	RIMS2	Q9UQ26	1411 aa		32.64	■■■□□ 2.82
FAM208B-213	ENST00000532424	RPRD2	Q5VT52	1461 aa	Known RBP	32.63	■■■□□ 2.81
FAM208B-213	ENST00000532424	CHIC2	Q9UKJ5	165 aa		32.63	■■■□□ 2.81
FAM208B-213	ENST00000532424	C14orf37	Q86TY3	774 aa		32.62	■■■□□ 2.81
FAM208B-213	ENST00000532424	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.62	■■■□□ 2.81
FAM208B-213	ENST00000532424	TMEM131L	A2VDJ0	1609 aa		32.6	■■■□□ 2.81
FAM208B-213	ENST00000532424	HDGF	P51858	240 aa	Known RBP	32.57	■■■□□ 2.8
FAM208B-213	ENST00000532424	CADPS2	Q86UW7	1296 aa		32.57	■■■□□ 2.8
FAM208B-213	ENST00000532424	TBX22	Q9Y458	520 aa		32.57	■■■□□ 2.8
FAM208B-213	ENST00000532424	RXRB	P28702	533 aa		32.55	■■■□□ 2.8
FAM208B-213	ENST00000532424	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.54	■■■□□ 2.8
FAM208B-213	ENST00000532424	DIP2A	Q14689	1571 aa		32.54	■■■□□ 2.8
FAM208B-213	ENST00000532424	ATF3	P18847	181 aa		32.53	■■■□□ 2.8
FAM208B-213	ENST00000532424	ADAMTS13	Q76LX8	1427 aa		32.52	■■■□□ 2.8
FAM208B-213	ENST00000532424	C19orf44	Q9H6X5	657 aa		32.52	■■■□□ 2.8
FAM208B-213	ENST00000532424	ADGRL2	O95490	1459 aa		32.52	■■■□□ 2.8
FAM208B-213	ENST00000532424	PIK3R4	Q99570	1358 aa		32.48	■■■□□ 2.79
FAM208B-213	ENST00000532424	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
FAM208B-213	ENST00000532424	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.47	■■■□□ 2.79
FAM208B-213	ENST00000532424	NUTM2E	B1AL46	878 aa	Predicted RBP	32.47	■■■□□ 2.79
FAM208B-213	ENST00000532424	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.47	■■■□□ 2.79
FAM208B-213	ENST00000532424	BRINP3	Q76B58	766 aa		32.45	■■■□□ 2.79
FAM208B-213	ENST00000532424	ANKRD50	Q9ULJ7	1429 aa		32.44	■■■□□ 2.78
FAM208B-213	ENST00000532424	TRPM2	O94759	1503 aa		32.43	■■■□□ 2.78
FAM208B-213	ENST00000532424	LOC105371045	A0A1W2PR82	267 aa		32.43	■■■□□ 2.78
FAM208B-213	ENST00000532424	CHGA	P10645	457 aa	Known RBP	32.43	■■■□□ 2.78
FAM208B-213	ENST00000532424	AFF2	P51816	1311 aa		32.43	■■■□□ 2.78
FAM208B-213	ENST00000532424	APLP2	Q06481	763 aa		32.42	■■■□□ 2.78
FAM208B-213	ENST00000532424	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.42	■■■□□ 2.78
FAM208B-213	ENST00000532424	ASXL1	Q8IXJ9	1541 aa		32.41	■■■□□ 2.78
FAM208B-213	ENST00000532424	DCC	P43146	1447 aa		32.39	■■■□□ 2.78
FAM208B-213	ENST00000532424	NHSL1	Q5SYE7	1610 aa		32.38	■■■□□ 2.77
FAM208B-213	ENST00000532424	SETD5	Q9C0A6	1442 aa		32.38	■■■□□ 2.77
FAM208B-213	ENST00000532424	RGS12	O14924	1447 aa		32.37	■■■□□ 2.77
FAM208B-213	ENST00000532424		E9PCH4	1651 aa		32.37	■■■□□ 2.77
FAM208B-213	ENST00000532424	UNC13B	O14795	1591 aa		32.36	■■■□□ 2.77
FAM208B-213	ENST00000532424	PTPRU	Q92729	1446 aa		32.36	■■■□□ 2.77
FAM208B-213	ENST00000532424	AMOTL2	Q9Y2J4	779 aa		32.36	■■■□□ 2.77
FAM208B-213	ENST00000532424	XRN1	Q8IZH2	1706 aa	Known RBP	32.32	■■■□□ 2.76
FAM208B-213	ENST00000532424	MST1R	Q04912	1400 aa		32.31	■■■□□ 2.76
FAM208B-213	ENST00000532424	C8orf37	Q96NL8	207 aa		32.29	■■■□□ 2.76
FAM208B-213	ENST00000532424	RBM6	P78332	1123 aa	Known RBP	32.28	■■■□□ 2.76
FAM208B-213	ENST00000532424	LRRC59	Q96AG4	307 aa	Known RBP	32.27	■■■□□ 2.76
FAM208B-213	ENST00000532424	NRXN3	Q9Y4C0	1643 aa		32.26	■■■□□ 2.76
FAM208B-213	ENST00000532424	FAM50A	Q14320	339 aa	Known RBP	32.26	■■■□□ 2.75
FAM208B-213	ENST00000532424	QTRT2	Q9H974	415 aa	Known RBP	32.26	■■■□□ 2.75
FAM208B-213	ENST00000532424	PNPLA6	Q8IY17	1366 aa		32.25	■■■□□ 2.75
FAM208B-213	ENST00000532424	IQGAP3	Q86VI3	1631 aa		32.23	■■■□□ 2.75
FAM208B-213	ENST00000532424	SETBP1	Q9Y6X0	1596 aa		32.22	■■■□□ 2.75
FAM208B-213	ENST00000532424	DDX17	Q92841	729 aa	Known RBP	32.18	■■■□□ 2.74
FAM208B-213	ENST00000532424	ADGRL3	Q9HAR2	1447 aa		32.17	■■■□□ 2.74
FAM208B-213	ENST00000532424	NALCN	Q8IZF0	1738 aa		32.16	■■■□□ 2.74
FAM208B-213	ENST00000532424	ATAD2	Q6PL18	1390 aa		32.16	■■■□□ 2.74
FAM208B-213	ENST00000532424	NGLY1	Q96IV0	654 aa		32.14	■■■□□ 2.74
FAM208B-213	ENST00000532424	MET	P08581	1390 aa		32.12	■■■□□ 2.73
FAM208B-213	ENST00000532424	ADAMTS2	O95450	1211 aa		32.12	■■■□□ 2.73
FAM208B-213	ENST00000532424	LAMC1	P11047	1609 aa		32.08	■■■□□ 2.73
FAM208B-213	ENST00000532424	SRCAP	Q6ZRS2	3230 aa		32.07	■■■□□ 2.72
FAM208B-213	ENST00000532424	SPHKAP	Q2M3C7	1700 aa		32.06	■■■□□ 2.72
FAM208B-213	ENST00000532424	NUP155	O75694	1391 aa		32.06	■■■□□ 2.72
FAM208B-213	ENST00000532424	C1orf167	Q5SNV9	1468 aa		32.04	■■■□□ 2.72
FAM208B-213	ENST00000532424	USP21	Q9UK80	565 aa		32.04	■■■□□ 2.72
FAM208B-213	ENST00000532424	ROCK1	Q13464	1354 aa		32.04	■■■□□ 2.72
FAM208B-213	ENST00000532424	FOXD1	Q16676	465 aa		32.02	■■■□□ 2.72
FAM208B-213	ENST00000532424	ZNF326	Q5BKZ1	582 aa	Known RBP	32.02	■■■□□ 2.72
FAM208B-213	ENST00000532424	ZRANB1	Q9UGI0	708 aa		32.02	■■■□□ 2.72
FAM208B-213	ENST00000532424	TRPC5	Q9UL62	973 aa	Predicted RBP	32.02	■■■□□ 2.72
FAM208B-213	ENST00000532424	PTCH1	Q13635	1447 aa		32	■■■□□ 2.71
FAM208B-213	ENST00000532424	SOS2	Q07890	1332 aa	Predicted RBP	31.98	■■■□□ 2.71
FAM208B-213	ENST00000532424	NEXMIF	Q5QGS0	1516 aa		31.97	■■■□□ 2.71
FAM208B-213	ENST00000532424	ATRN	O75882	1429 aa		31.97	■■■□□ 2.71
FAM208B-213	ENST00000532424	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.95	■■■□□ 2.71
FAM208B-213	ENST00000532424	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.95	■■■□□ 2.71
FAM208B-213	ENST00000532424	ORAI2	Q96SN7	254 aa		31.92	■■■□□ 2.7
FAM208B-213	ENST00000532424	CLTCL1	P53675	1640 aa		31.89	■■■□□ 2.7
FAM208B-213	ENST00000532424	CCDC125	Q86Z20	511 aa		31.87	■■■□□ 2.69
FAM208B-213	ENST00000532424	ROBO2	Q9HCK4	1378 aa		31.86	■■■□□ 2.69
FAM208B-213	ENST00000532424	MYOM2	P54296	1465 aa		31.85	■■■□□ 2.69
FAM208B-213	ENST00000532424	MARF1	Q9Y4F3	1742 aa	Known RBP	31.85	■■■□□ 2.69
FAM208B-213	ENST00000532424	EP400	Q96L91	3159 aa		31.84	■■■□□ 2.69
FAM208B-213	ENST00000532424	BCL9L	Q86UU0	1499 aa		31.84	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms