RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 NWD1Q149M9 1564 aa32.86■■■□□ 2.85
CHKA-206ENST00000531341 NKTRP30414 1462 aaKnown RBP32.84■■■□□ 2.85
CHKA-206ENST00000531341 FAM50AQ14320 339 aaKnown RBP32.82■■■□□ 2.84
CHKA-206ENST00000531341 ZFYVE9O95405 1425 aa32.82■■■□□ 2.84
CHKA-206ENST00000531341 SLAIN2Q9P270 581 aa32.81■■■□□ 2.84
CHKA-206ENST00000531341 ANKRD50Q9ULJ7 1429 aa32.8■■■□□ 2.84
CHKA-206ENST00000531341 MSH6P52701 1360 aa32.8■■■□□ 2.84
CHKA-206ENST00000531341 PLEKHG1Q9ULL1 1385 aa32.78■■■□□ 2.84
CHKA-206ENST00000531341 RPRD2Q5VT52 1461 aaKnown RBP32.77■■■□□ 2.84
CHKA-206ENST00000531341 RIMS2Q9UQ26 1411 aa32.77■■■□□ 2.84
CHKA-206ENST00000531341 MYO5BQ9ULV0 1848 aa32.75■■■□□ 2.83
CHKA-206ENST00000531341 PPP1R15AO75807 674 aaPredicted RBP32.73■■■□□ 2.83
CHKA-206ENST00000531341 NUTM2DQ5VT03 806 aaPredicted RBP32.72■■■□□ 2.83
CHKA-206ENST00000531341 TMEM131LA2VDJ0 1609 aa32.72■■■□□ 2.83
CHKA-206ENST00000531341 GCC2Q8IWJ2 1684 aa32.72■■■□□ 2.83
CHKA-206ENST00000531341 CHD2O14647 1828 aaKnown RBP32.71■■■□□ 2.83
CHKA-206ENST00000531341 PHLPP1O60346 1717 aa32.69■■■□□ 2.82
CHKA-206ENST00000531341 CHGAP10645 457 aaKnown RBP32.69■■■□□ 2.82
CHKA-206ENST00000531341 TBX22Q9Y458 520 aa32.69■■■□□ 2.82
CHKA-206ENST00000531341 JCADQ9P266 1359 aa32.68■■■□□ 2.82
CHKA-206ENST00000531341 HDGFP51858 240 aaKnown RBP32.67■■■□□ 2.82
CHKA-206ENST00000531341 ADAMTS13Q76LX8 1427 aa32.64■■■□□ 2.82
CHKA-206ENST00000531341 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.61■■■□□ 2.81
CHKA-206ENST00000531341 COL16A1Q07092 1604 aaPredicted RBP32.61■■■□□ 2.81
CHKA-206ENST00000531341 UNC13BO14795 1591 aa32.6■■■□□ 2.81
CHKA-206ENST00000531341 NCOA3Q9Y6Q9 1424 aa32.6■■■□□ 2.81
CHKA-206ENST00000531341 C14orf37Q86TY3 774 aa32.59■■■□□ 2.81
CHKA-206ENST00000531341 SETD1AO15047 1707 aaKnown RBP32.58■■■□□ 2.81
CHKA-206ENST00000531341 E9PCH4 1651 aa32.58■■■□□ 2.81
CHKA-206ENST00000531341 LRP6O75581 1613 aa32.58■■■□□ 2.81
CHKA-206ENST00000531341 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.54■■■□□ 2.8
CHKA-206ENST00000531341 PTPRUQ92729 1446 aa32.53■■■□□ 2.8
CHKA-206ENST00000531341 C19orf44Q9H6X5 657 aa32.53■■■□□ 2.8
CHKA-206ENST00000531341 CADPS2Q86UW7 1296 aa32.52■■■□□ 2.8
CHKA-206ENST00000531341 AMOTL2Q9Y2J4 779 aa32.51■■■□□ 2.79
CHKA-206ENST00000531341 PIK3R4Q99570 1358 aa32.5■■■□□ 2.79
CHKA-206ENST00000531341 ATF3P18847 181 aa32.5■■■□□ 2.79
CHKA-206ENST00000531341 SPATA31A6Q5VVP1 1343 aa32.5■■■□□ 2.79
CHKA-206ENST00000531341 DIP2AQ14689 1571 aa32.48■■■□□ 2.79
CHKA-206ENST00000531341 IQGAP3Q86VI3 1631 aa32.48■■■□□ 2.79
CHKA-206ENST00000531341 ROCK1Q13464 1354 aa32.47■■■□□ 2.79
CHKA-206ENST00000531341 AHDC1Q5TGY3 1603 aaPredicted RBP32.47■■■□□ 2.79
CHKA-206ENST00000531341 NUP155O75694 1391 aa32.46■■■□□ 2.79
CHKA-206ENST00000531341 MEX3CQ5U5Q3 659 aaKnown RBP32.46■■■□□ 2.79
CHKA-206ENST00000531341 BRINP3Q76B58 766 aa32.46■■■□□ 2.79
CHKA-206ENST00000531341 TRPM2O94759 1503 aa32.42■■■□□ 2.78
CHKA-206ENST00000531341 ITGAEP38570 1179 aa32.42■■■□□ 2.78
CHKA-206ENST00000531341 TRIM52Q96A61 297 aa32.41■■■□□ 2.78
CHKA-206ENST00000531341 ZNF772Q68DY9 489 aaPredicted RBP32.4■■■□□ 2.78
CHKA-206ENST00000531341 SHPRHQ149N8 1683 aa32.38■■■□□ 2.77
CHKA-206ENST00000531341 NUTM2BA6NNL0 878 aaPredicted RBP32.37■■■□□ 2.77
CHKA-206ENST00000531341 NUTM2EB1AL46 878 aaPredicted RBP32.37■■■□□ 2.77
CHKA-206ENST00000531341 NUTM2AQ8IVF1 878 aaPredicted RBP32.37■■■□□ 2.77
CHKA-206ENST00000531341 UPF1Q92900 1129 aaKnown RBP eCLIP32.37■■■□□ 2.77
CHKA-206ENST00000531341 NRXN3Q9Y4C0 1643 aa32.37■■■□□ 2.77
CHKA-206ENST00000531341 METP08581 1390 aa32.33■■■□□ 2.77
CHKA-206ENST00000531341 PPARGC1BQ86YN6 1023 aaKnown RBP32.31■■■□□ 2.76
CHKA-206ENST00000531341 MST1RQ04912 1400 aa32.31■■■□□ 2.76
CHKA-206ENST00000531341 XRN1Q8IZH2 1706 aaKnown RBP32.31■■■□□ 2.76
CHKA-206ENST00000531341 ASXL1Q8IXJ9 1541 aa32.31■■■□□ 2.76
CHKA-206ENST00000531341 DCCP43146 1447 aa32.3■■■□□ 2.76
CHKA-206ENST00000531341 ZNF326Q5BKZ1 582 aaKnown RBP32.3■■■□□ 2.76
CHKA-206ENST00000531341 SETBP1Q9Y6X0 1596 aa32.29■■■□□ 2.76
CHKA-206ENST00000531341 RXRBP28702 533 aa32.29■■■□□ 2.76
CHKA-206ENST00000531341 DDX17Q92841 729 aaKnown RBP32.29■■■□□ 2.76
CHKA-206ENST00000531341 SETD5Q9C0A6 1442 aa32.26■■■□□ 2.76
CHKA-206ENST00000531341 AFF2P51816 1311 aa32.26■■■□□ 2.75
CHKA-206ENST00000531341 SPHKAPQ2M3C7 1700 aa32.23■■■□□ 2.75
CHKA-206ENST00000531341 NHSL1Q5SYE7 1610 aa32.21■■■□□ 2.75
CHKA-206ENST00000531341 LRRC59Q96AG4 307 aaKnown RBP32.2■■■□□ 2.75
CHKA-206ENST00000531341 ADGRL3Q9HAR2 1447 aa32.17■■■□□ 2.74
CHKA-206ENST00000531341 NEXMIFQ5QGS0 1516 aa32.17■■■□□ 2.74
CHKA-206ENST00000531341 CLTCL1P53675 1640 aa32.16■■■□□ 2.74
CHKA-206ENST00000531341 PNPLA6Q8IY17 1366 aa32.16■■■□□ 2.74
CHKA-206ENST00000531341 C8orf37Q96NL8 207 aa32.15■■■□□ 2.74
CHKA-206ENST00000531341 CDK12Q9NYV4 1490 aaPredicted RBP32.15■■■□□ 2.74
CHKA-206ENST00000531341 NALCNQ8IZF0 1738 aa32.13■■■□□ 2.73
CHKA-206ENST00000531341 QTRT2Q9H974 415 aaKnown RBP32.12■■■□□ 2.73
CHKA-206ENST00000531341 C1orf167Q5SNV9 1468 aa32.09■■■□□ 2.73
CHKA-206ENST00000531341 SRCAPQ6ZRS2 3230 aa32.08■■■□□ 2.73
CHKA-206ENST00000531341 RGS12O14924 1447 aa32.08■■■□□ 2.73
CHKA-206ENST00000531341 ADAMTS2O95450 1211 aa32.06■■■□□ 2.72
CHKA-206ENST00000531341 ORAI2Q96SN7 254 aa32.06■■■□□ 2.72
CHKA-206ENST00000531341 RBM6P78332 1123 aaKnown RBP32.05■■■□□ 2.72
CHKA-206ENST00000531341 ROBO2Q9HCK4 1378 aa32.05■■■□□ 2.72
CHKA-206ENST00000531341 NGLY1Q96IV0 654 aa32.01■■■□□ 2.71
CHKA-206ENST00000531341 NAIPQ13075 1403 aa32■■■□□ 2.71
CHKA-206ENST00000531341 SOS2Q07890 1332 aaPredicted RBP32■■■□□ 2.71
CHKA-206ENST00000531341 PTCH1Q13635 1447 aa31.99■■■□□ 2.71
CHKA-206ENST00000531341 KIF1BO60333 1816 aa31.98■■■□□ 2.71
CHKA-206ENST00000531341 VGFO15240 615 aaPredicted RBP31.97■■■□□ 2.71
CHKA-206ENST00000531341 LAMC1P11047 1609 aa31.96■■■□□ 2.71
CHKA-206ENST00000531341 RRBP1Q9P2E9 1410 aaKnown RBP31.92■■■□□ 2.7
CHKA-206ENST00000531341 USP21Q9UK80 565 aa31.91■■■□□ 2.7
CHKA-206ENST00000531341 PRAG1Q86YV5 1406 aa31.89■■■□□ 2.7
CHKA-206ENST00000531341 RPGRIP1LQ68CZ1 1315 aa31.87■■■□□ 2.69
CHKA-206ENST00000531341 FNBP4Q8N3X1 1017 aaPredicted RBP31.87■■■□□ 2.69
CHKA-206ENST00000531341 EP400Q96L91 3159 aa31.86■■■□□ 2.69
CHKA-206ENST00000531341 HFM1A2PYH4 1435 aa31.85■■■□□ 2.69
CHKA-206ENST00000531341 SLC4A1APQ9BWU0 796 aaKnown RBP31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms