RNA–Protein interactions for RNA: ENST00000531285.1

TRNP1-202, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene TRNP1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-202ENST00000531285 NKTRP30414 1462 aaKnown RBP33.24■■■□□ 2.91
TRNP1-202ENST00000531285 FAM50AQ14320 339 aaKnown RBP33.22■■■□□ 2.91
TRNP1-202ENST00000531285 BCANQ96GW7 911 aa33.22■■■□□ 2.91
TRNP1-202ENST00000531285 GCC2Q8IWJ2 1684 aa33.22■■■□□ 2.91
TRNP1-202ENST00000531285 RPRD2Q5VT52 1461 aaKnown RBP33.21■■■□□ 2.91
TRNP1-202ENST00000531285 ANKRD50Q9ULJ7 1429 aa33.2■■■□□ 2.91
TRNP1-202ENST00000531285 ZFYVE9O95405 1425 aa33.16■■■□□ 2.9
TRNP1-202ENST00000531285 CHD2O14647 1828 aaKnown RBP33.16■■■□□ 2.9
TRNP1-202ENST00000531285 TMEM131LA2VDJ0 1609 aa33.14■■■□□ 2.9
TRNP1-202ENST00000531285 MSH6P52701 1360 aa33.14■■■□□ 2.9
TRNP1-202ENST00000531285 RIMS2Q9UQ26 1411 aa33.12■■■□□ 2.89
TRNP1-202ENST00000531285 PLEKHG1Q9ULL1 1385 aa33.12■■■□□ 2.89
TRNP1-202ENST00000531285 UNC13BO14795 1591 aa33.11■■■□□ 2.89
TRNP1-202ENST00000531285 PHLPP1O60346 1717 aa33.11■■■□□ 2.89
TRNP1-202ENST00000531285 PPP1R15AO75807 674 aaPredicted RBP33.1■■■□□ 2.89
TRNP1-202ENST00000531285 POTEAQ6S8J7 498 aa33.07■■■□□ 2.88
TRNP1-202ENST00000531285 E9PCH4 1651 aa33.06■■■□□ 2.88
TRNP1-202ENST00000531285 SLAIN2Q9P270 581 aa33.05■■■□□ 2.88
TRNP1-202ENST00000531285 HDGFP51858 240 aaKnown RBP33.03■■■□□ 2.88
TRNP1-202ENST00000531285 CHGAP10645 457 aaKnown RBP33.02■■■□□ 2.88
TRNP1-202ENST00000531285 TBX22Q9Y458 520 aa32.98■■■□□ 2.87
TRNP1-202ENST00000531285 IQGAP3Q86VI3 1631 aa32.98■■■□□ 2.87
TRNP1-202ENST00000531285 NUTM2DQ5VT03 806 aaPredicted RBP32.97■■■□□ 2.87
TRNP1-202ENST00000531285 COL16A1Q07092 1604 aaPredicted RBP32.97■■■□□ 2.87
TRNP1-202ENST00000531285 JCADQ9P266 1359 aa32.96■■■□□ 2.87
TRNP1-202ENST00000531285 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.96■■■□□ 2.87
TRNP1-202ENST00000531285 ADAMTS13Q76LX8 1427 aa32.95■■■□□ 2.87
TRNP1-202ENST00000531285 DIP2AQ14689 1571 aa32.95■■■□□ 2.86
TRNP1-202ENST00000531285 C14orf37Q86TY3 774 aa32.93■■■□□ 2.86
TRNP1-202ENST00000531285 SETD1AO15047 1707 aaKnown RBP32.93■■■□□ 2.86
TRNP1-202ENST00000531285 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.93■■■□□ 2.86
TRNP1-202ENST00000531285 NCOA3Q9Y6Q9 1424 aa32.92■■■□□ 2.86
TRNP1-202ENST00000531285 ROCK1Q13464 1354 aa32.9■■■□□ 2.86
TRNP1-202ENST00000531285 TRPM2O94759 1503 aa32.86■■■□□ 2.85
TRNP1-202ENST00000531285 PIK3R4Q99570 1358 aa32.85■■■□□ 2.85
TRNP1-202ENST00000531285 NUP155O75694 1391 aa32.84■■■□□ 2.85
TRNP1-202ENST00000531285 LRP6O75581 1613 aa32.84■■■□□ 2.85
TRNP1-202ENST00000531285 AHDC1Q5TGY3 1603 aaPredicted RBP32.84■■■□□ 2.85
TRNP1-202ENST00000531285 CADPS2Q86UW7 1296 aa32.82■■■□□ 2.84
TRNP1-202ENST00000531285 C19orf44Q9H6X5 657 aa32.82■■■□□ 2.84
TRNP1-202ENST00000531285 ATF3P18847 181 aa32.81■■■□□ 2.84
TRNP1-202ENST00000531285 PTPRUQ92729 1446 aa32.8■■■□□ 2.84
TRNP1-202ENST00000531285 SHPRHQ149N8 1683 aa32.8■■■□□ 2.84
TRNP1-202ENST00000531285 ITGAEP38570 1179 aa32.79■■■□□ 2.84
TRNP1-202ENST00000531285 AMOTL2Q9Y2J4 779 aa32.78■■■□□ 2.84
TRNP1-202ENST00000531285 SPATA31A6Q5VVP1 1343 aa32.77■■■□□ 2.84
TRNP1-202ENST00000531285 NRXN3Q9Y4C0 1643 aa32.77■■■□□ 2.84
TRNP1-202ENST00000531285 SPHKAPQ2M3C7 1700 aa32.77■■■□□ 2.84
TRNP1-202ENST00000531285 MEX3CQ5U5Q3 659 aaKnown RBP32.75■■■□□ 2.83
TRNP1-202ENST00000531285 XRN1Q8IZH2 1706 aaKnown RBP32.74■■■□□ 2.83
TRNP1-202ENST00000531285 SETBP1Q9Y6X0 1596 aa32.71■■■□□ 2.83
TRNP1-202ENST00000531285 BRINP3Q76B58 766 aa32.7■■■□□ 2.83
TRNP1-202ENST00000531285 DCCP43146 1447 aa32.68■■■□□ 2.82
TRNP1-202ENST00000531285 ZNF772Q68DY9 489 aaPredicted RBP32.67■■■□□ 2.82
TRNP1-202ENST00000531285 ASXL1Q8IXJ9 1541 aa32.66■■■□□ 2.82
TRNP1-202ENST00000531285 ZNF326Q5BKZ1 582 aaKnown RBP32.65■■■□□ 2.82
TRNP1-202ENST00000531285 PPARGC1BQ86YN6 1023 aaKnown RBP32.64■■■□□ 2.82
TRNP1-202ENST00000531285 NHSL1Q5SYE7 1610 aa32.62■■■□□ 2.81
TRNP1-202ENST00000531285 MST1RQ04912 1400 aa32.62■■■□□ 2.81
TRNP1-202ENST00000531285 TRIM52Q96A61 297 aa32.62■■■□□ 2.81
TRNP1-202ENST00000531285 METP08581 1390 aa32.61■■■□□ 2.81
TRNP1-202ENST00000531285 NUTM2BA6NNL0 878 aaPredicted RBP32.61■■■□□ 2.81
TRNP1-202ENST00000531285 NUTM2EB1AL46 878 aaPredicted RBP32.61■■■□□ 2.81
TRNP1-202ENST00000531285 NUTM2AQ8IVF1 878 aaPredicted RBP32.61■■■□□ 2.81
TRNP1-202ENST00000531285 CLTCL1P53675 1640 aa32.61■■■□□ 2.81
TRNP1-202ENST00000531285 NEXMIFQ5QGS0 1516 aa32.58■■■□□ 2.81
TRNP1-202ENST00000531285 NALCNQ8IZF0 1738 aa32.57■■■□□ 2.81
TRNP1-202ENST00000531285 SETD5Q9C0A6 1442 aa32.56■■■□□ 2.8
TRNP1-202ENST00000531285 KIF1BO60333 1816 aa32.55■■■□□ 2.8
TRNP1-202ENST00000531285 ADGRL3Q9HAR2 1447 aa32.54■■■□□ 2.8
TRNP1-202ENST00000531285 UPF1Q92900 1129 aaKnown RBP eCLIP32.52■■■□□ 2.81e-9■□□□□ 10.5
TRNP1-202ENST00000531285 RXRBP28702 533 aa32.51■■■□□ 2.79
TRNP1-202ENST00000531285 DDX17Q92841 729 aaKnown RBP32.49■■■□□ 2.79
TRNP1-202ENST00000531285 AFF2P51816 1311 aa32.49■■■□□ 2.79
TRNP1-202ENST00000531285 LRRC59Q96AG4 307 aaKnown RBP32.47■■■□□ 2.79
TRNP1-202ENST00000531285 CDK12Q9NYV4 1490 aaPredicted RBP32.45■■■□□ 2.79
TRNP1-202ENST00000531285 PNPLA6Q8IY17 1366 aa32.44■■■□□ 2.78
TRNP1-202ENST00000531285 NAIPQ13075 1403 aa32.41■■■□□ 2.78
TRNP1-202ENST00000531285 C8orf37Q96NL8 207 aa32.4■■■□□ 2.78
TRNP1-202ENST00000531285 C1orf167Q5SNV9 1468 aa32.39■■■□□ 2.78
TRNP1-202ENST00000531285 PTCH1Q13635 1447 aa32.38■■■□□ 2.77
TRNP1-202ENST00000531285 RRBP1Q9P2E9 1410 aaKnown RBP32.38■■■□□ 2.77
TRNP1-202ENST00000531285 LAMC1P11047 1609 aa32.37■■■□□ 2.77
TRNP1-202ENST00000531285 ROBO2Q9HCK4 1378 aa32.34■■■□□ 2.77
TRNP1-202ENST00000531285 RGS12O14924 1447 aa32.34■■■□□ 2.77
TRNP1-202ENST00000531285 VGFO15240 615 aaPredicted RBP32.32■■■□□ 2.76
TRNP1-202ENST00000531285 QTRT2Q9H974 415 aaKnown RBP32.32■■■□□ 2.76
TRNP1-202ENST00000531285 PPLO60437 1756 aa32.32■■■□□ 2.76
TRNP1-202ENST00000531285 ADAMTS2O95450 1211 aa32.3■■■□□ 2.76
TRNP1-202ENST00000531285 RBM6P78332 1123 aaKnown RBP32.3■■■□□ 2.76
TRNP1-202ENST00000531285 ORAI2Q96SN7 254 aa32.29■■■□□ 2.76
TRNP1-202ENST00000531285 PRAG1Q86YV5 1406 aa32.27■■■□□ 2.76
TRNP1-202ENST00000531285 NGLY1Q96IV0 654 aa32.27■■■□□ 2.76
TRNP1-202ENST00000531285 SOS2Q07890 1332 aaPredicted RBP32.26■■■□□ 2.75
TRNP1-202ENST00000531285 RPGRIP1LQ68CZ1 1315 aa32.25■■■□□ 2.75
TRNP1-202ENST00000531285 HFM1A2PYH4 1435 aa32.23■■■□□ 2.75
TRNP1-202ENST00000531285 SLC4A1APQ9BWU0 796 aaKnown RBP32.22■■■□□ 2.75
TRNP1-202ENST00000531285 COL22A1Q8NFW1 1626 aaPredicted RBP32.19■■■□□ 2.74
TRNP1-202ENST00000531285 CDC42BPGQ6DT37 1551 aa32.17■■■□□ 2.74
TRNP1-202ENST00000531285 USP21Q9UK80 565 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms