RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 PROSER2Q86WR7 435 aaPredicted RBP27.99■■■□□ 2.07
PSMC3-208ENST00000530887 BCANQ96GW7 911 aa27.99■■■□□ 2.07
PSMC3-208ENST00000530887 UNC13BO14795 1591 aa27.99■■■□□ 2.07
PSMC3-208ENST00000530887 NWD1Q149M9 1564 aa27.99■■■□□ 2.07
PSMC3-208ENST00000530887 PLEKHG1Q9ULL1 1385 aa27.99■■■□□ 2.07
PSMC3-208ENST00000530887 SLC26A8Q96RN1 970 aa27.98■■■□□ 2.07
PSMC3-208ENST00000530887 PPP1R15AO75807 674 aaPredicted RBP27.97■■■□□ 2.07
PSMC3-208ENST00000530887 ZFYVE9O95405 1425 aa27.95■■■□□ 2.07
PSMC3-208ENST00000530887 MSH6P52701 1360 aa27.95■■■□□ 2.06
PSMC3-208ENST00000530887 NCOA3Q9Y6Q9 1424 aa27.93■■■□□ 2.06
PSMC3-208ENST00000530887 RIMS2Q9UQ26 1411 aa27.92■■■□□ 2.06
PSMC3-208ENST00000530887 TBX22Q9Y458 520 aa27.91■■■□□ 2.06
PSMC3-208ENST00000530887 TMEM131LA2VDJ0 1609 aa27.9■■■□□ 2.06
PSMC3-208ENST00000530887 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.05
PSMC3-208ENST00000530887 PIK3R4Q99570 1358 aa27.88■■■□□ 2.05
PSMC3-208ENST00000530887 DIP2AQ14689 1571 aa27.87■■■□□ 2.05
PSMC3-208ENST00000530887 SENP3Q9H4L4 574 aaPredicted RBP27.86■■■□□ 2.05
PSMC3-208ENST00000530887 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
PSMC3-208ENST00000530887 ROBO1Q9Y6N7 1651 aa27.84■■■□□ 2.05
PSMC3-208ENST00000530887 MYO5BQ9ULV0 1848 aa27.83■■■□□ 2.05
PSMC3-208ENST00000530887 CHGAP10645 457 aaKnown RBP27.83■■■□□ 2.05
PSMC3-208ENST00000530887 E9PCH4 1651 aa27.83■■■□□ 2.05
PSMC3-208ENST00000530887 NUP155O75694 1391 aa27.83■■■□□ 2.05
PSMC3-208ENST00000530887 SLAIN2Q9P270 581 aa27.81■■■□□ 2.04
PSMC3-208ENST00000530887 CADPS2Q86UW7 1296 aa27.76■■■□□ 2.03
PSMC3-208ENST00000530887 TRPM2O94759 1503 aa27.74■■■□□ 2.03
PSMC3-208ENST00000530887 ADAMTS13Q76LX8 1427 aa27.74■■■□□ 2.03
PSMC3-208ENST00000530887 JCADQ9P266 1359 aa27.73■■■□□ 2.03
PSMC3-208ENST00000530887 C14orf37Q86TY3 774 aa27.73■■■□□ 2.03
PSMC3-208ENST00000530887 C19orf44Q9H6X5 657 aa27.73■■■□□ 2.03
PSMC3-208ENST00000530887 RBM33Q96EV2 1170 aaKnown RBP27.72■■■□□ 2.03
PSMC3-208ENST00000530887 ATF3P18847 181 aa27.7■■■□□ 2.02
PSMC3-208ENST00000530887 RGS17Q9UGC6 210 aaPredicted RBP27.69■■■□□ 2.02
PSMC3-208ENST00000530887 PHLPP1O60346 1717 aa27.69■■■□□ 2.02
PSMC3-208ENST00000530887 ITGAEP38570 1179 aa27.68■■■□□ 2.02
PSMC3-208ENST00000530887 DCCP43146 1447 aa27.66■■■□□ 2.02
PSMC3-208ENST00000530887 SPHKAPQ2M3C7 1700 aa27.65■■■□□ 2.02
PSMC3-208ENST00000530887 SPATA31A6Q5VVP1 1343 aa27.64■■■□□ 2.01
PSMC3-208ENST00000530887 AMOTL2Q9Y2J4 779 aa27.63■■■□□ 2.01
PSMC3-208ENST00000530887 SETBP1Q9Y6X0 1596 aa27.63■■■□□ 2.01
PSMC3-208ENST00000530887 NUTM2DQ5VT03 806 aaPredicted RBP27.61■■■□□ 2.01
PSMC3-208ENST00000530887 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.61■■■□□ 2.01
PSMC3-208ENST00000530887 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
PSMC3-208ENST00000530887 AHDC1Q5TGY3 1603 aaPredicted RBP27.59■■■□□ 2.01
PSMC3-208ENST00000530887 RRBP1Q9P2E9 1410 aaKnown RBP27.59■■■□□ 2.01
PSMC3-208ENST00000530887 COL16A1Q07092 1604 aaPredicted RBP27.59■■■□□ 2.01
PSMC3-208ENST00000530887 POTEAQ6S8J7 498 aa27.54■■■□□ 2
PSMC3-208ENST00000530887 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
PSMC3-208ENST00000530887 PTPRUQ92729 1446 aa27.53■■■□□ 2
PSMC3-208ENST00000530887 ZNF772Q68DY9 489 aaPredicted RBP27.52■■■□□ 2
PSMC3-208ENST00000530887 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
PSMC3-208ENST00000530887 SHPRHQ149N8 1683 aa27.5■■□□□ 1.99
PSMC3-208ENST00000530887 MEX3CQ5U5Q3 659 aaKnown RBP27.5■■□□□ 1.99
PSMC3-208ENST00000530887 NAIPQ13075 1403 aa27.5■■□□□ 1.99
PSMC3-208ENST00000530887 KIF1BO60333 1816 aa27.49■■□□□ 1.99
PSMC3-208ENST00000530887 VGFO15240 615 aaPredicted RBP27.48■■□□□ 1.99
PSMC3-208ENST00000530887 BRINP3Q76B58 766 aa27.48■■□□□ 1.99
PSMC3-208ENST00000530887 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
PSMC3-208ENST00000530887 RPGRIP1LQ68CZ1 1315 aa27.46■■□□□ 1.99
PSMC3-208ENST00000530887 CLTCL1P53675 1640 aa27.46■■□□□ 1.99
PSMC3-208ENST00000530887 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
PSMC3-208ENST00000530887 HFM1A2PYH4 1435 aa27.45■■□□□ 1.98
PSMC3-208ENST00000530887 ADGRL3Q9HAR2 1447 aa27.45■■□□□ 1.98
PSMC3-208ENST00000530887 METP08581 1390 aa27.44■■□□□ 1.98
PSMC3-208ENST00000530887 SETD5Q9C0A6 1442 aa27.43■■□□□ 1.98
PSMC3-208ENST00000530887 MST1RQ04912 1400 aa27.42■■□□□ 1.98
PSMC3-208ENST00000530887 ASXL1Q8IXJ9 1541 aa27.42■■□□□ 1.98
PSMC3-208ENST00000530887 LRRC59Q96AG4 307 aaKnown RBP27.42■■□□□ 1.98
PSMC3-208ENST00000530887 TRIM52Q96A61 297 aa27.4■■□□□ 1.98
PSMC3-208ENST00000530887 PTCH1Q13635 1447 aa27.4■■□□□ 1.98
PSMC3-208ENST00000530887 LRP6O75581 1613 aa27.38■■□□□ 1.97
PSMC3-208ENST00000530887 PRAG1Q86YV5 1406 aa27.38■■□□□ 1.97
PSMC3-208ENST00000530887 ACIN1Q9UKV3 1341 aaKnown RBP27.38■■□□□ 1.97
PSMC3-208ENST00000530887 SLC4A1APQ9BWU0 796 aaKnown RBP27.37■■□□□ 1.97
PSMC3-208ENST00000530887 NHSL1Q5SYE7 1610 aa27.37■■□□□ 1.97
PSMC3-208ENST00000530887 CDK12Q9NYV4 1490 aaPredicted RBP27.31■■□□□ 1.96
PSMC3-208ENST00000530887 RXRBP28702 533 aa27.3■■□□□ 1.96
PSMC3-208ENST00000530887 NALCNQ8IZF0 1738 aa27.29■■□□□ 1.96
PSMC3-208ENST00000530887 C1orf167Q5SNV9 1468 aa27.28■■□□□ 1.96
PSMC3-208ENST00000530887 NUTM2BA6NNL0 878 aaPredicted RBP27.27■■□□□ 1.96
PSMC3-208ENST00000530887 NUTM2EB1AL46 878 aaPredicted RBP27.27■■□□□ 1.96
PSMC3-208ENST00000530887 NUTM2AQ8IVF1 878 aaPredicted RBP27.27■■□□□ 1.96
PSMC3-208ENST00000530887 SETD1AO15047 1707 aaKnown RBP27.25■■□□□ 1.95
PSMC3-208ENST00000530887 LAMC1P11047 1609 aa27.25■■□□□ 1.95
PSMC3-208ENST00000530887 PPLO60437 1756 aa27.24■■□□□ 1.95
PSMC3-208ENST00000530887 CCDC144AA2RUR9 1427 aa27.24■■□□□ 1.95
PSMC3-208ENST00000530887 PNPLA6Q8IY17 1366 aa27.23■■□□□ 1.95
PSMC3-208ENST00000530887 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
PSMC3-208ENST00000530887 AFF2P51816 1311 aa27.22■■□□□ 1.95
PSMC3-208ENST00000530887 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
PSMC3-208ENST00000530887 SOS2Q07890 1332 aaPredicted RBP27.19■■□□□ 1.94
PSMC3-208ENST00000530887 RBM6P78332 1123 aaKnown RBP27.16■■□□□ 1.94
PSMC3-208ENST00000530887 CDC42BPGQ6DT37 1551 aa27.15■■□□□ 1.94
PSMC3-208ENST00000530887 UPF1Q92900 1129 aaKnown RBP eCLIP27.15■■□□□ 1.94
PSMC3-208ENST00000530887 C8orf37Q96NL8 207 aa27.15■■□□□ 1.94
PSMC3-208ENST00000530887 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
PSMC3-208ENST00000530887 LRPPRCP42704 1394 aaKnown RBP27.14■■□□□ 1.94
PSMC3-208ENST00000530887 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
PSMC3-208ENST00000530887 TECPR2O15040 1411 aa27.13■■□□□ 1.93
PSMC3-208ENST00000530887 QTRT2Q9H974 415 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms