RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 BCANQ96GW7 911 aa23.11■■□□□ 1.29
CAPN1-219ENST00000530495 RGS17Q9UGC6 210 aaPredicted RBP23.11■■□□□ 1.29
CAPN1-219ENST00000530495 NKTRP30414 1462 aaKnown RBP23.11■■□□□ 1.29
CAPN1-219ENST00000530495 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
CAPN1-219ENST00000530495 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
CAPN1-219ENST00000530495 ZFYVE9O95405 1425 aa23.09■■□□□ 1.29
CAPN1-219ENST00000530495 PLEKHG1Q9ULL1 1385 aa23.08■■□□□ 1.29
CAPN1-219ENST00000530495 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
CAPN1-219ENST00000530495 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.28
CAPN1-219ENST00000530495 GCC2Q8IWJ2 1684 aa23.07■■□□□ 1.28
CAPN1-219ENST00000530495 CHD2O14647 1828 aaKnown RBP23.06■■□□□ 1.28
CAPN1-219ENST00000530495 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
CAPN1-219ENST00000530495 UNC13BO14795 1591 aa23.05■■□□□ 1.28
CAPN1-219ENST00000530495 MSH6P52701 1360 aa23.04■■□□□ 1.28
CAPN1-219ENST00000530495 SLAIN2Q9P270 581 aa23.04■■□□□ 1.28
CAPN1-219ENST00000530495 TBX22Q9Y458 520 aa23.04■■□□□ 1.28
CAPN1-219ENST00000530495 PPP1R15AO75807 674 aaPredicted RBP23.03■■□□□ 1.28
CAPN1-219ENST00000530495 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.02■■□□□ 1.28
CAPN1-219ENST00000530495 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
CAPN1-219ENST00000530495 E9PCH4 1651 aa23.01■■□□□ 1.27
CAPN1-219ENST00000530495 CHGAP10645 457 aaKnown RBP22.99■■□□□ 1.27
CAPN1-219ENST00000530495 NCOA3Q9Y6Q9 1424 aa22.99■■□□□ 1.27
CAPN1-219ENST00000530495 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
CAPN1-219ENST00000530495 POTEAQ6S8J7 498 aa22.96■■□□□ 1.27
CAPN1-219ENST00000530495 PHLPP1O60346 1717 aa22.95■■□□□ 1.26
CAPN1-219ENST00000530495 ADAMTS13Q76LX8 1427 aa22.95■■□□□ 1.26
CAPN1-219ENST00000530495 PIK3R4Q99570 1358 aa22.93■■□□□ 1.26
CAPN1-219ENST00000530495 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-219ENST00000530495 NUP155O75694 1391 aa22.92■■□□□ 1.26
CAPN1-219ENST00000530495 DIP2AQ14689 1571 aa22.92■■□□□ 1.26
CAPN1-219ENST00000530495 JCADQ9P266 1359 aa22.9■■□□□ 1.26
CAPN1-219ENST00000530495 C19orf44Q9H6X5 657 aa22.9■■□□□ 1.26
CAPN1-219ENST00000530495 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
CAPN1-219ENST00000530495 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
CAPN1-219ENST00000530495 CADPS2Q86UW7 1296 aa22.88■■□□□ 1.25
CAPN1-219ENST00000530495 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-219ENST00000530495 ITGAEP38570 1179 aa22.87■■□□□ 1.25
CAPN1-219ENST00000530495 AMOTL2Q9Y2J4 779 aa22.86■■□□□ 1.25
CAPN1-219ENST00000530495 ATF3P18847 181 aa22.85■■□□□ 1.25
CAPN1-219ENST00000530495 TRPM2O94759 1503 aa22.85■■□□□ 1.25
CAPN1-219ENST00000530495 PTPRUQ92729 1446 aa22.82■■□□□ 1.24
CAPN1-219ENST00000530495 SPATA31A6Q5VVP1 1343 aa22.82■■□□□ 1.24
CAPN1-219ENST00000530495 SPHKAPQ2M3C7 1700 aa22.8■■□□□ 1.24
CAPN1-219ENST00000530495 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
CAPN1-219ENST00000530495 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
CAPN1-219ENST00000530495 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
CAPN1-219ENST00000530495 SETBP1Q9Y6X0 1596 aa22.78■■□□□ 1.24
CAPN1-219ENST00000530495 BRINP3Q76B58 766 aa22.76■■□□□ 1.23
CAPN1-219ENST00000530495 LRP6O75581 1613 aa22.75■■□□□ 1.23
CAPN1-219ENST00000530495 DCCP43146 1447 aa22.75■■□□□ 1.23
CAPN1-219ENST00000530495 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
CAPN1-219ENST00000530495 XRN1Q8IZH2 1706 aaKnown RBP22.75■■□□□ 1.23
CAPN1-219ENST00000530495 ZNF326Q5BKZ1 582 aaKnown RBP22.75■■□□□ 1.23
CAPN1-219ENST00000530495 METP08581 1390 aa22.73■■□□□ 1.23
CAPN1-219ENST00000530495 MEX3CQ5U5Q3 659 aaKnown RBP22.72■■□□□ 1.23
CAPN1-219ENST00000530495 ZNF772Q68DY9 489 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-219ENST00000530495 SETD1AO15047 1707 aaKnown RBP22.7■■□□□ 1.22
CAPN1-219ENST00000530495 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
CAPN1-219ENST00000530495 ASXL1Q8IXJ9 1541 aa22.68■■□□□ 1.22
CAPN1-219ENST00000530495 MST1RQ04912 1400 aa22.68■■□□□ 1.22
CAPN1-219ENST00000530495 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
CAPN1-219ENST00000530495 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
CAPN1-219ENST00000530495 KIF1BO60333 1816 aa22.66■■□□□ 1.22
CAPN1-219ENST00000530495 RRBP1Q9P2E9 1410 aaKnown RBP22.65■■□□□ 1.22
CAPN1-219ENST00000530495 NAIPQ13075 1403 aa22.65■■□□□ 1.22
CAPN1-219ENST00000530495 NHSL1Q5SYE7 1610 aa22.64■■□□□ 1.22
CAPN1-219ENST00000530495 NUTM2BA6NNL0 878 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-219ENST00000530495 NUTM2EB1AL46 878 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-219ENST00000530495 NUTM2AQ8IVF1 878 aaPredicted RBP22.64■■□□□ 1.21
CAPN1-219ENST00000530495 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
CAPN1-219ENST00000530495 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
CAPN1-219ENST00000530495 VGFO15240 615 aaPredicted RBP22.61■■□□□ 1.21
CAPN1-219ENST00000530495 RXRBP28702 533 aa22.61■■□□□ 1.21
CAPN1-219ENST00000530495 NALCNQ8IZF0 1738 aa22.6■■□□□ 1.21
CAPN1-219ENST00000530495 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
CAPN1-219ENST00000530495 UPF1Q92900 1129 aaKnown RBP eCLIP22.58■■□□□ 1.21
CAPN1-219ENST00000530495 DDX17Q92841 729 aaKnown RBP22.57■■□□□ 1.2
CAPN1-219ENST00000530495 AFF2P51816 1311 aa22.57■■□□□ 1.2
CAPN1-219ENST00000530495 RPGRIP1LQ68CZ1 1315 aa22.57■■□□□ 1.2
CAPN1-219ENST00000530495 CDK12Q9NYV4 1490 aaPredicted RBP22.55■■□□□ 1.2
CAPN1-219ENST00000530495 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
CAPN1-219ENST00000530495 PNPLA6Q8IY17 1366 aa22.54■■□□□ 1.2
CAPN1-219ENST00000530495 HFM1A2PYH4 1435 aa22.54■■□□□ 1.2
CAPN1-219ENST00000530495 PTCH1Q13635 1447 aa22.54■■□□□ 1.2
CAPN1-219ENST00000530495 ROBO2Q9HCK4 1378 aa22.52■■□□□ 1.2
CAPN1-219ENST00000530495 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.2
CAPN1-219ENST00000530495 LAMC1P11047 1609 aa22.52■■□□□ 1.2
CAPN1-219ENST00000530495 PRAG1Q86YV5 1406 aa22.51■■□□□ 1.19
CAPN1-219ENST00000530495 C8orf37Q96NL8 207 aa22.5■■□□□ 1.19
CAPN1-219ENST00000530495 PPLO60437 1756 aa22.5■■□□□ 1.19
CAPN1-219ENST00000530495 ORAI2Q96SN7 254 aa22.49■■□□□ 1.19
CAPN1-219ENST00000530495 QTRT2Q9H974 415 aaKnown RBP22.49■■□□□ 1.19
CAPN1-219ENST00000530495 SOS2Q07890 1332 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-219ENST00000530495 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
CAPN1-219ENST00000530495 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
CAPN1-219ENST00000530495 ADAMTS2O95450 1211 aa22.44■■□□□ 1.18
CAPN1-219ENST00000530495 FOXD1Q16676 465 aa22.41■■□□□ 1.18
CAPN1-219ENST00000530495 RGS12O14924 1447 aa22.4■■□□□ 1.18
CAPN1-219ENST00000530495 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
CAPN1-219ENST00000530495 COL22A1Q8NFW1 1626 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms