RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 RABEP1Q15276 862 aa15.29■□□□□ 0.04
PDE4DIP-227ENST00000529945 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
PDE4DIP-227ENST00000529945 RAD21O60216 631 aa15.28■□□□□ 0.04
PDE4DIP-227ENST00000529945 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
PDE4DIP-227ENST00000529945 TRIM34Q9BYJ4 488 aa15.28■□□□□ 0.04
PDE4DIP-227ENST00000529945 CHMP4CQ96CF2 233 aa15.28■□□□□ 0.04
PDE4DIP-227ENST00000529945 STAMBPO95630 424 aa15.27■□□□□ 0.04
PDE4DIP-227ENST00000529945 ZWINTO95229 277 aa15.27■□□□□ 0.03
PDE4DIP-227ENST00000529945 OLFM4Q6UX06 510 aa15.27■□□□□ 0.03
PDE4DIP-227ENST00000529945 CCP110O43303 1012 aa15.27■□□□□ 0.03
PDE4DIP-227ENST00000529945 PUS7Q96PZ0 661 aaKnown RBP15.27■□□□□ 0.03
PDE4DIP-227ENST00000529945 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 CARD11Q9BXL7 1154 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 RRP9O43818 475 aaKnown RBP15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 CCDC91Q7Z6B0 441 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 SOX12O15370 315 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 MTUS2Q5JR59 1369 aa15.26■□□□□ 0.03
PDE4DIP-227ENST00000529945 VGFO15240 615 aaPredicted RBP15.25■□□□□ 0.03
PDE4DIP-227ENST00000529945 DAAM2Q86T65 1068 aa15.25■□□□□ 0.03
PDE4DIP-227ENST00000529945 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
PDE4DIP-227ENST00000529945 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
PDE4DIP-227ENST00000529945 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
PDE4DIP-227ENST00000529945 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
PDE4DIP-227ENST00000529945 CGNL1Q0VF96 1302 aa15.24■□□□□ 0.03
PDE4DIP-227ENST00000529945 CCDC112Q8NEF3 446 aa15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 POGKQ9P215 609 aa15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 RILPL2Q969X0 211 aa15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
PDE4DIP-227ENST00000529945 SIN3AQ96ST3 1273 aa15.22■□□□□ 0.03
PDE4DIP-227ENST00000529945 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDE4DIP-227ENST00000529945 SYCP1Q15431 976 aa15.22■□□□□ 0.03
PDE4DIP-227ENST00000529945 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
PDE4DIP-227ENST00000529945 CCDC181Q5TID7 509 aa15.22■□□□□ 0.03
PDE4DIP-227ENST00000529945 SUDS3Q9H7L9 328 aaPredicted RBP15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 CCDC102AQ96A19 550 aa15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 UQCRHLA0A096LP55 91 aa15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 KIF3BO15066 747 aa15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 UQCRHP07919 91 aa15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 SMC2O95347 1197 aa15.21■□□□□ 0.03
PDE4DIP-227ENST00000529945 SHTN1A0MZ66 631 aa15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 ERLIN1O75477 346 aa15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 TMCO3Q6UWJ1 677 aa15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 NPM1P06748 294 aaKnown RBP eCLIP15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 CCDC9Q9Y3X0 531 aaKnown RBP15.2■□□□□ 0.02
PDE4DIP-227ENST00000529945 TMCO5BA8MYB1 307 aa15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 TRIM5Q9C035 493 aa15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 WDR66Q8TBY9 1149 aa15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 FEZ1Q99689 392 aa15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
PDE4DIP-227ENST00000529945 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
PDE4DIP-227ENST00000529945 CCDC160A6NGH7 325 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 MICALCLQ6ZW33 695 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 CPLX1O14810 134 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 SSR1P43307 286 aaKnown RBP15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 IQCEQ6IPM2 695 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 FAM114A1Q8IWE2 563 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 LRRFIP2Q9Y608 721 aaKnown RBP15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 FOSBP53539 338 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 CCDC73Q6ZRK6 1079 aa15.17■□□□□ 0.02
PDE4DIP-227ENST00000529945 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 SPC24Q8NBT2 197 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 FLIIQ13045 1269 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 FAM184BQ9ULE4 1060 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 TIGD1Q96MW7 591 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 KIF3CO14782 793 aa15.16■□□□□ 0.02
PDE4DIP-227ENST00000529945 GRIPAP1Q4V328 841 aa15.15■□□□□ 0.02
PDE4DIP-227ENST00000529945 NAP1L3Q99457 506 aaPredicted RBP15.15■□□□□ 0.02
PDE4DIP-227ENST00000529945 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
PDE4DIP-227ENST00000529945 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
PDE4DIP-227ENST00000529945 RNF20Q5VTR2 975 aa15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 PAIP2Q9BPZ3 127 aaKnown RBP15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 MAGEC2Q9UBF1 373 aaPredicted RBP15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 VPS37CA5D8V6 355 aaPredicted RBP15.14■□□□□ 0.01
PDE4DIP-227ENST00000529945 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 FYB1O15117 783 aa15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 CPSF2Q9P2I0 782 aaKnown RBP15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 TRERF1Q96PN7 1200 aa15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 SERPINA10Q9UK55 444 aa15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 NUCB2P80303 420 aa15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
PDE4DIP-227ENST00000529945 MNAT1P51948 309 aa15.12■□□□□ 0.01
PDE4DIP-227ENST00000529945 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
PDE4DIP-227ENST00000529945 SETSIPP0DME0 302 aa15.12■□□□□ 0.01
PDE4DIP-227ENST00000529945 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms