RNA–Protein interactions for RNA: ENST00000529008.5

SSR2-215, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5 BASIC

Gene SSR2, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-215ENST00000529008 TET3O43151 1660 aa12.53□□□□□ -0.4
SSR2-215ENST00000529008 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
SSR2-215ENST00000529008 MSH6P52701 1360 aa12.52□□□□□ -0.41
SSR2-215ENST00000529008 NWD1Q149M9 1564 aa12.52□□□□□ -0.41
SSR2-215ENST00000529008 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
SSR2-215ENST00000529008 ZFYVE9O95405 1425 aa12.51□□□□□ -0.41
SSR2-215ENST00000529008 PLEKHG1Q9ULL1 1385 aa12.5□□□□□ -0.41
SSR2-215ENST00000529008 RIMS2Q9UQ26 1411 aa12.5□□□□□ -0.41
SSR2-215ENST00000529008 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
SSR2-215ENST00000529008 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
SSR2-215ENST00000529008 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
SSR2-215ENST00000529008 POTEAQ6S8J7 498 aa12.46□□□□□ -0.41
SSR2-215ENST00000529008 C14orf37Q86TY3 774 aa12.46□□□□□ -0.41
SSR2-215ENST00000529008 PCGF6Q9BYE7 350 aa12.46□□□□□ -0.41
SSR2-215ENST00000529008 SLAIN2Q9P270 581 aa12.46□□□□□ -0.41
SSR2-215ENST00000529008 UNC13BO14795 1591 aa12.45□□□□□ -0.42
SSR2-215ENST00000529008 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
SSR2-215ENST00000529008 GCC2Q8IWJ2 1684 aa12.45□□□□□ -0.42
SSR2-215ENST00000529008 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
SSR2-215ENST00000529008 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
SSR2-215ENST00000529008 JCADQ9P266 1359 aa12.43□□□□□ -0.42
SSR2-215ENST00000529008 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
SSR2-215ENST00000529008 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSR2-215ENST00000529008 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
SSR2-215ENST00000529008 ITGAEP38570 1179 aa12.42□□□□□ -0.42
SSR2-215ENST00000529008 TBX22Q9Y458 520 aa12.42□□□□□ -0.42
SSR2-215ENST00000529008 NUP155O75694 1391 aa12.42□□□□□ -0.42
SSR2-215ENST00000529008 DIP2AQ14689 1571 aa12.4□□□□□ -0.42
SSR2-215ENST00000529008 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
SSR2-215ENST00000529008 E9PCH4 1651 aa12.4□□□□□ -0.42
SSR2-215ENST00000529008 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
SSR2-215ENST00000529008 PHLPP1O60346 1717 aa12.4□□□□□ -0.43
SSR2-215ENST00000529008 ATF3P18847 181 aa12.39□□□□□ -0.43
SSR2-215ENST00000529008 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
SSR2-215ENST00000529008 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
SSR2-215ENST00000529008 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
SSR2-215ENST00000529008 LRP6O75581 1613 aa12.38□□□□□ -0.43
SSR2-215ENST00000529008 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
SSR2-215ENST00000529008 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 TRPM2O94759 1503 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
SSR2-215ENST00000529008 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
SSR2-215ENST00000529008 HRCP23327 699 aa12.36□□□□□ -0.43
SSR2-215ENST00000529008 CHD2O14647 1828 aaKnown RBP12.35□□□□□ -0.43
SSR2-215ENST00000529008 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
SSR2-215ENST00000529008 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
SSR2-215ENST00000529008 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
SSR2-215ENST00000529008 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
SSR2-215ENST00000529008 DCCP43146 1447 aa12.33□□□□□ -0.44
SSR2-215ENST00000529008 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
SSR2-215ENST00000529008 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
SSR2-215ENST00000529008 METP08581 1390 aa12.32□□□□□ -0.44
SSR2-215ENST00000529008 SETBP1Q9Y6X0 1596 aa12.32□□□□□ -0.44
SSR2-215ENST00000529008 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
SSR2-215ENST00000529008 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
SSR2-215ENST00000529008 ZNF772Q68DY9 489 aaPredicted RBP12.32□□□□□ -0.44
SSR2-215ENST00000529008 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
SSR2-215ENST00000529008 TRIM52Q96A61 297 aa12.32□□□□□ -0.44
SSR2-215ENST00000529008 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
SSR2-215ENST00000529008 MST1RQ04912 1400 aa12.3□□□□□ -0.44
SSR2-215ENST00000529008 XRN1Q8IZH2 1706 aaKnown RBP12.3□□□□□ -0.44
SSR2-215ENST00000529008 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
SSR2-215ENST00000529008 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
SSR2-215ENST00000529008 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
SSR2-215ENST00000529008 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.44
SSR2-215ENST00000529008 DDX17Q92841 729 aaKnown RBP12.27□□□□□ -0.45
SSR2-215ENST00000529008 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
SSR2-215ENST00000529008 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
SSR2-215ENST00000529008 RXRBP28702 533 aa12.26□□□□□ -0.45
SSR2-215ENST00000529008 AFF2P51816 1311 aa12.26□□□□□ -0.45
SSR2-215ENST00000529008 NAIPQ13075 1403 aa12.25□□□□□ -0.45
SSR2-215ENST00000529008 PNPLA6Q8IY17 1366 aa12.24□□□□□ -0.45
SSR2-215ENST00000529008 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.451e-13■■■■■ 65.7
SSR2-215ENST00000529008 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
SSR2-215ENST00000529008 C8orf37Q96NL8 207 aa12.24□□□□□ -0.45
SSR2-215ENST00000529008 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
SSR2-215ENST00000529008 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
SSR2-215ENST00000529008 NHSL1Q5SYE7 1610 aa12.22□□□□□ -0.45
SSR2-215ENST00000529008 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
SSR2-215ENST00000529008 ROBO2Q9HCK4 1378 aa12.22□□□□□ -0.45
SSR2-215ENST00000529008 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
SSR2-215ENST00000529008 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
SSR2-215ENST00000529008 RGS12O14924 1447 aa12.21□□□□□ -0.45
SSR2-215ENST00000529008 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
SSR2-215ENST00000529008 HFM1A2PYH4 1435 aa12.2□□□□□ -0.46
SSR2-215ENST00000529008 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
SSR2-215ENST00000529008 ORAI2Q96SN7 254 aa12.19□□□□□ -0.46
SSR2-215ENST00000529008 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
SSR2-215ENST00000529008 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
SSR2-215ENST00000529008 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
SSR2-215ENST00000529008 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
SSR2-215ENST00000529008 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
SSR2-215ENST00000529008 PRAG1Q86YV5 1406 aa12.17□□□□□ -0.46
SSR2-215ENST00000529008 SOS2Q07890 1332 aaPredicted RBP12.16□□□□□ -0.46
SSR2-215ENST00000529008 RPGRIP1LQ68CZ1 1315 aa12.15□□□□□ -0.46
SSR2-215ENST00000529008 FOXD1Q16676 465 aa12.15□□□□□ -0.46
SSR2-215ENST00000529008 SRCAPQ6ZRS2 3230 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms