RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 E9PCH4 1651 aa13.08□□□□□ -0.31
CHD7-206ENST00000527900 ZFYVE9O95405 1425 aa13.08□□□□□ -0.32
CHD7-206ENST00000527900 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
CHD7-206ENST00000527900 KCNA6P17658 529 aa13.06□□□□□ -0.32
CHD7-206ENST00000527900 ADRA2BP18089 450 aa13.05□□□□□ -0.32
CHD7-206ENST00000527900 SLC26A8Q96RN1 970 aa13.05□□□□□ -0.32
CHD7-206ENST00000527900 RRBP1Q9P2E9 1410 aaKnown RBP13.05□□□□□ -0.32
CHD7-206ENST00000527900 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
CHD7-206ENST00000527900 NUP155O75694 1391 aa13.04□□□□□ -0.32
CHD7-206ENST00000527900 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
CHD7-206ENST00000527900 ITGAEP38570 1179 aa13.03□□□□□ -0.32
CHD7-206ENST00000527900 PLEKHG1Q9ULL1 1385 aa13.03□□□□□ -0.32
CHD7-206ENST00000527900 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
CHD7-206ENST00000527900 CHD2O14647 1828 aaKnown RBP13.02□□□□□ -0.32
CHD7-206ENST00000527900 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
CHD7-206ENST00000527900 SOCS7O14512 581 aa13□□□□□ -0.33
CHD7-206ENST00000527900 HDGFP51858 240 aaKnown RBP13□□□□□ -0.33
CHD7-206ENST00000527900 TBX22Q9Y458 520 aa13□□□□□ -0.33
CHD7-206ENST00000527900 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
CHD7-206ENST00000527900 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
CHD7-206ENST00000527900 FAM135BQ49AJ0 1406 aa12.99□□□□□ -0.33
CHD7-206ENST00000527900 NAIPQ13075 1403 aa12.98□□□□□ -0.33
CHD7-206ENST00000527900 ADAMTS13Q76LX8 1427 aa12.98□□□□□ -0.33
CHD7-206ENST00000527900 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
CHD7-206ENST00000527900 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHD7-206ENST00000527900 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
CHD7-206ENST00000527900 SPHKAPQ2M3C7 1700 aa12.96□□□□□ -0.33
CHD7-206ENST00000527900 CHGAP10645 457 aaKnown RBP12.95□□□□□ -0.34
CHD7-206ENST00000527900 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
CHD7-206ENST00000527900 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
CHD7-206ENST00000527900 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
CHD7-206ENST00000527900 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
CHD7-206ENST00000527900 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
CHD7-206ENST00000527900 BCANQ96GW7 911 aa12.94□□□□□ -0.34
CHD7-206ENST00000527900 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
CHD7-206ENST00000527900 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
CHD7-206ENST00000527900 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
CHD7-206ENST00000527900 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
CHD7-206ENST00000527900 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
CHD7-206ENST00000527900 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
CHD7-206ENST00000527900 MSH6P52701 1360 aa12.91□□□□□ -0.34
CHD7-206ENST00000527900 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
CHD7-206ENST00000527900 TRPM2O94759 1503 aa12.9□□□□□ -0.34
CHD7-206ENST00000527900 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
CHD7-206ENST00000527900 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
CHD7-206ENST00000527900 RGS17Q9UGC6 210 aaPredicted RBP12.88□□□□□ -0.35
CHD7-206ENST00000527900 AMOTL2Q9Y2J4 779 aa12.88□□□□□ -0.35
CHD7-206ENST00000527900 KIF1BO60333 1816 aa12.88□□□□□ -0.35
CHD7-206ENST00000527900 XRN1Q8IZH2 1706 aaKnown RBP12.88□□□□□ -0.35
CHD7-206ENST00000527900 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
CHD7-206ENST00000527900 METP08581 1390 aa12.86□□□□□ -0.35
CHD7-206ENST00000527900 ZNF326Q5BKZ1 582 aaKnown RBP12.84□□□□□ -0.35
CHD7-206ENST00000527900 PHLPP1O60346 1717 aa12.84□□□□□ -0.35
CHD7-206ENST00000527900 SETD1AO15047 1707 aaKnown RBP12.83□□□□□ -0.36
CHD7-206ENST00000527900 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.36
CHD7-206ENST00000527900 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
CHD7-206ENST00000527900 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
CHD7-206ENST00000527900 COL16A1Q07092 1604 aaPredicted RBP12.83□□□□□ -0.36
CHD7-206ENST00000527900 DCCP43146 1447 aa12.81□□□□□ -0.36
CHD7-206ENST00000527900 RPGRIP1LQ68CZ1 1315 aa12.81□□□□□ -0.36
CHD7-206ENST00000527900 AHDC1Q5TGY3 1603 aaPredicted RBP12.8□□□□□ -0.36
CHD7-206ENST00000527900 PPLO60437 1756 aa12.8□□□□□ -0.36
CHD7-206ENST00000527900 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
CHD7-206ENST00000527900 ATF3P18847 181 aa12.8□□□□□ -0.36
CHD7-206ENST00000527900 JCADQ9P266 1359 aa12.8□□□□□ -0.36
CHD7-206ENST00000527900 BRINP3Q76B58 766 aa12.79□□□□□ -0.36
CHD7-206ENST00000527900 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
CHD7-206ENST00000527900 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
CHD7-206ENST00000527900 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
CHD7-206ENST00000527900 MPHOSPH9Q99550 1183 aa12.78□□□□□ -0.36
CHD7-206ENST00000527900 MST1RQ04912 1400 aa12.78□□□□□ -0.36
CHD7-206ENST00000527900 ADGRL3Q9HAR2 1447 aa12.77□□□□□ -0.37
CHD7-206ENST00000527900 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
CHD7-206ENST00000527900 SPATA31E1Q6ZUB1 1445 aa12.76□□□□□ -0.37
CHD7-206ENST00000527900 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
CHD7-206ENST00000527900 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
CHD7-206ENST00000527900 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 LRP6O75581 1613 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 SPATA31A6Q5VVP1 1343 aa12.74□□□□□ -0.37
CHD7-206ENST00000527900 SETD5Q9C0A6 1442 aa12.73□□□□□ -0.37
CHD7-206ENST00000527900 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
CHD7-206ENST00000527900 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
CHD7-206ENST00000527900 ACIN1Q9UKV3 1341 aaKnown RBP12.72□□□□□ -0.37
CHD7-206ENST00000527900 LAMC1P11047 1609 aa12.72□□□□□ -0.37
CHD7-206ENST00000527900 C1orf167Q5SNV9 1468 aa12.71□□□□□ -0.38
CHD7-206ENST00000527900 ANKRD30BQ9BXX2 1392 aa12.69□□□□□ -0.38
CHD7-206ENST00000527900 RGL3Q3MIN7 710 aa12.69□□□□□ -0.38
CHD7-206ENST00000527900 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
CHD7-206ENST00000527900 TECPR2O15040 1411 aa12.69□□□□□ -0.38
CHD7-206ENST00000527900 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
CHD7-206ENST00000527900 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
CHD7-206ENST00000527900 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
CHD7-206ENST00000527900 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
CHD7-206ENST00000527900 NRXN1Q9ULB1 1477 aa12.66□□□□□ -0.38
CHD7-206ENST00000527900 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
CHD7-206ENST00000527900 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
CHD7-206ENST00000527900 RAB3GAP2Q9H2M9 1393 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms