RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 NWD1Q149M9 1564 aa28.66■■■□□ 2.18
CDC27-203ENST00000526866 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.18
CDC27-203ENST00000526866 BCANQ96GW7 911 aa28.63■■■□□ 2.17
CDC27-203ENST00000526866 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
CDC27-203ENST00000526866 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
CDC27-203ENST00000526866 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
CDC27-203ENST00000526866 UNC13BO14795 1591 aa28.61■■■□□ 2.17
CDC27-203ENST00000526866 TMEM131LA2VDJ0 1609 aa28.6■■■□□ 2.17
CDC27-203ENST00000526866 RIMS2Q9UQ26 1411 aa28.59■■■□□ 2.17
CDC27-203ENST00000526866 PLEKHG1Q9ULL1 1385 aa28.58■■■□□ 2.17
CDC27-203ENST00000526866 RGS17Q9UGC6 210 aaPredicted RBP28.58■■■□□ 2.17
CDC27-203ENST00000526866 CHD2O14647 1828 aaKnown RBP28.57■■■□□ 2.16
CDC27-203ENST00000526866 E9PCH4 1651 aa28.55■■■□□ 2.16
CDC27-203ENST00000526866 PPP1R15AO75807 674 aaPredicted RBP28.54■■■□□ 2.16
CDC27-203ENST00000526866 MSH6P52701 1360 aa28.53■■■□□ 2.16
CDC27-203ENST00000526866 HDGFP51858 240 aaKnown RBP28.52■■■□□ 2.16
CDC27-203ENST00000526866 CHGAP10645 457 aaKnown RBP28.52■■■□□ 2.16
CDC27-203ENST00000526866 ROCK1Q13464 1354 aa28.51■■■□□ 2.15
CDC27-203ENST00000526866 IQGAP3Q86VI3 1631 aa28.5■■■□□ 2.15
CDC27-203ENST00000526866 TBX22Q9Y458 520 aa28.48■■■□□ 2.15
CDC27-203ENST00000526866 SLAIN2Q9P270 581 aa28.47■■■□□ 2.15
CDC27-203ENST00000526866 NUTM2DQ5VT03 806 aaPredicted RBP28.46■■■□□ 2.15
CDC27-203ENST00000526866 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.46■■■□□ 2.15
CDC27-203ENST00000526866 PHLPP1O60346 1717 aa28.45■■■□□ 2.14
CDC27-203ENST00000526866 ADAMTS13Q76LX8 1427 aa28.44■■■□□ 2.14
CDC27-203ENST00000526866 NUP155O75694 1391 aa28.42■■■□□ 2.14
CDC27-203ENST00000526866 ITGAEP38570 1179 aa28.41■■■□□ 2.14
CDC27-203ENST00000526866 POTEAQ6S8J7 498 aa28.41■■■□□ 2.14
CDC27-203ENST00000526866 DIP2AQ14689 1571 aa28.41■■■□□ 2.14
CDC27-203ENST00000526866 NCOA3Q9Y6Q9 1424 aa28.4■■■□□ 2.14
CDC27-203ENST00000526866 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
CDC27-203ENST00000526866 JCADQ9P266 1359 aa28.36■■■□□ 2.13
CDC27-203ENST00000526866 C14orf37Q86TY3 774 aa28.35■■■□□ 2.13
CDC27-203ENST00000526866 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
CDC27-203ENST00000526866 COL16A1Q07092 1604 aaPredicted RBP28.35■■■□□ 2.13
CDC27-203ENST00000526866 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
CDC27-203ENST00000526866 TRPM2O94759 1503 aa28.33■■■□□ 2.13
CDC27-203ENST00000526866 PTPRUQ92729 1446 aa28.31■■■□□ 2.12
CDC27-203ENST00000526866 SPHKAPQ2M3C7 1700 aa28.3■■■□□ 2.12
CDC27-203ENST00000526866 C19orf44Q9H6X5 657 aa28.3■■■□□ 2.12
CDC27-203ENST00000526866 CADPS2Q86UW7 1296 aa28.29■■■□□ 2.12
CDC27-203ENST00000526866 AMOTL2Q9Y2J4 779 aa28.29■■■□□ 2.12
CDC27-203ENST00000526866 NRXN3Q9Y4C0 1643 aa28.28■■■□□ 2.12
CDC27-203ENST00000526866 ATF3P18847 181 aa28.27■■■□□ 2.12
CDC27-203ENST00000526866 AHDC1Q5TGY3 1603 aaPredicted RBP28.26■■■□□ 2.11
CDC27-203ENST00000526866 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
CDC27-203ENST00000526866 LRP6O75581 1613 aa28.23■■■□□ 2.11
CDC27-203ENST00000526866 XRN1Q8IZH2 1706 aaKnown RBP28.23■■■□□ 2.11
CDC27-203ENST00000526866 SETD1AO15047 1707 aaKnown RBP28.21■■■□□ 2.11
CDC27-203ENST00000526866 SPATA31A6Q5VVP1 1343 aa28.21■■■□□ 2.11
CDC27-203ENST00000526866 ZNF326Q5BKZ1 582 aaKnown RBP28.2■■■□□ 2.11
CDC27-203ENST00000526866 SHPRHQ149N8 1683 aa28.2■■■□□ 2.1
CDC27-203ENST00000526866 BRINP3Q76B58 766 aa28.18■■■□□ 2.1
CDC27-203ENST00000526866 CLTCL1P53675 1640 aa28.17■■■□□ 2.1
CDC27-203ENST00000526866 DCCP43146 1447 aa28.17■■■□□ 2.1
CDC27-203ENST00000526866 METP08581 1390 aa28.16■■■□□ 2.1
CDC27-203ENST00000526866 NEXMIFQ5QGS0 1516 aa28.14■■■□□ 2.1
CDC27-203ENST00000526866 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
CDC27-203ENST00000526866 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
CDC27-203ENST00000526866 MST1RQ04912 1400 aa28.12■■■□□ 2.09
CDC27-203ENST00000526866 RRBP1Q9P2E9 1410 aaKnown RBP28.12■■■□□ 2.09
CDC27-203ENST00000526866 NAIPQ13075 1403 aa28.1■■■□□ 2.09
CDC27-203ENST00000526866 KIF1BO60333 1816 aa28.1■■■□□ 2.09
CDC27-203ENST00000526866 NHSL1Q5SYE7 1610 aa28.08■■■□□ 2.09
CDC27-203ENST00000526866 ZNF772Q68DY9 489 aaPredicted RBP28.08■■■□□ 2.09
CDC27-203ENST00000526866 NALCNQ8IZF0 1738 aa28.06■■■□□ 2.08
CDC27-203ENST00000526866 ADGRL3Q9HAR2 1447 aa28.06■■■□□ 2.08
CDC27-203ENST00000526866 NUTM2BA6NNL0 878 aaPredicted RBP28.05■■■□□ 2.08
CDC27-203ENST00000526866 NUTM2EB1AL46 878 aaPredicted RBP28.05■■■□□ 2.08
CDC27-203ENST00000526866 NUTM2AQ8IVF1 878 aaPredicted RBP28.05■■■□□ 2.08
CDC27-203ENST00000526866 SETD5Q9C0A6 1442 aa28.04■■■□□ 2.08
CDC27-203ENST00000526866 TRIM52Q96A61 297 aa28.01■■■□□ 2.07
CDC27-203ENST00000526866 DDX17Q92841 729 aaKnown RBP28■■■□□ 2.07
CDC27-203ENST00000526866 LRRC59Q96AG4 307 aaKnown RBP27.98■■■□□ 2.07
CDC27-203ENST00000526866 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
CDC27-203ENST00000526866 VGFO15240 615 aaPredicted RBP27.95■■■□□ 2.07
CDC27-203ENST00000526866 AFF2P51816 1311 aa27.95■■■□□ 2.06
CDC27-203ENST00000526866 RXRBP28702 533 aa27.94■■■□□ 2.06
CDC27-203ENST00000526866 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
CDC27-203ENST00000526866 C1orf167Q5SNV9 1468 aa27.94■■■□□ 2.06
CDC27-203ENST00000526866 PNPLA6Q8IY17 1366 aa27.93■■■□□ 2.06
CDC27-203ENST00000526866 ROBO2Q9HCK4 1378 aa27.93■■■□□ 2.06
CDC27-203ENST00000526866 UPF1Q92900 1129 aaKnown RBP eCLIP27.92■■■□□ 2.06
CDC27-203ENST00000526866 SLC4A1APQ9BWU0 796 aaKnown RBP27.91■■■□□ 2.06
CDC27-203ENST00000526866 PPLO60437 1756 aa27.91■■■□□ 2.06
CDC27-203ENST00000526866 RPGRIP1LQ68CZ1 1315 aa27.9■■■□□ 2.06
CDC27-203ENST00000526866 CDK12Q9NYV4 1490 aaPredicted RBP27.89■■■□□ 2.06
CDC27-203ENST00000526866 C8orf37Q96NL8 207 aa27.88■■■□□ 2.05
CDC27-203ENST00000526866 LAMC1P11047 1609 aa27.88■■■□□ 2.05
CDC27-203ENST00000526866 PRAG1Q86YV5 1406 aa27.88■■■□□ 2.05
CDC27-203ENST00000526866 ORAI2Q96SN7 254 aa27.86■■■□□ 2.05
CDC27-203ENST00000526866 SOS2Q07890 1332 aaPredicted RBP27.82■■■□□ 2.04
CDC27-203ENST00000526866 FOXD1Q16676 465 aa27.82■■■□□ 2.04
CDC27-203ENST00000526866 QTRT2Q9H974 415 aaKnown RBP27.81■■■□□ 2.04
CDC27-203ENST00000526866 ADAMTS2O95450 1211 aa27.8■■■□□ 2.04
CDC27-203ENST00000526866 RGS12O14924 1447 aa27.79■■■□□ 2.04
CDC27-203ENST00000526866 RBM6P78332 1123 aaKnown RBP27.77■■■□□ 2.04
CDC27-203ENST00000526866 NGLY1Q96IV0 654 aa27.77■■■□□ 2.04
CDC27-203ENST00000526866 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
CDC27-203ENST00000526866 CDC42BPGQ6DT37 1551 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms