RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 DAPK1P53355 1430 aa30.94■■■□□ 2.54
AMBRA1-205ENST00000526606 CHD2O14647 1828 aaKnown RBP30.94■■■□□ 2.54
AMBRA1-205ENST00000526606 BCANQ96GW7 911 aa30.93■■■□□ 2.54
AMBRA1-205ENST00000526606 SLC52A1Q9NWF4 448 aa30.92■■■□□ 2.54
AMBRA1-205ENST00000526606 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
AMBRA1-205ENST00000526606 ZFYVE9O95405 1425 aa30.9■■■□□ 2.54
AMBRA1-205ENST00000526606 CHIC2Q9UKJ5 165 aa30.89■■■□□ 2.54
AMBRA1-205ENST00000526606 SPATA31A6Q5VVP1 1343 aa30.88■■■□□ 2.53
AMBRA1-205ENST00000526606 PLEKHG1Q9ULL1 1385 aa30.88■■■□□ 2.53
AMBRA1-205ENST00000526606 TRIM52Q96A61 297 aa30.87■■■□□ 2.53
AMBRA1-205ENST00000526606 SRCAPQ6ZRS2 3230 aa30.87■■■□□ 2.53
AMBRA1-205ENST00000526606 FGD6Q6ZV73 1430 aa30.86■■■□□ 2.53
AMBRA1-205ENST00000526606 LOC105371045A0A1W2PR82 267 aa30.85■■■□□ 2.53
AMBRA1-205ENST00000526606 ZNF772Q68DY9 489 aaPredicted RBP30.85■■■□□ 2.53
AMBRA1-205ENST00000526606 MYO5BQ9ULV0 1848 aa30.84■■■□□ 2.53
AMBRA1-205ENST00000526606 ANKRD30AQ9BXX3 1397 aa30.83■■■□□ 2.53
AMBRA1-205ENST00000526606 TBX22Q9Y458 520 aa30.83■■■□□ 2.53
AMBRA1-205ENST00000526606 NCOA3Q9Y6Q9 1424 aa30.82■■■□□ 2.52
AMBRA1-205ENST00000526606 RIMS2Q9UQ26 1411 aa30.81■■■□□ 2.52
AMBRA1-205ENST00000526606 MEX3CQ5U5Q3 659 aaKnown RBP30.8■■■□□ 2.52
AMBRA1-205ENST00000526606 AHDC1Q5TGY3 1603 aaPredicted RBP30.79■■■□□ 2.52
AMBRA1-205ENST00000526606 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.77■■■□□ 2.52
AMBRA1-205ENST00000526606 SHPRHQ149N8 1683 aa30.77■■■□□ 2.52
AMBRA1-205ENST00000526606 TMEM131LA2VDJ0 1609 aa30.76■■■□□ 2.52
AMBRA1-205ENST00000526606 C19orf44Q9H6X5 657 aa30.76■■■□□ 2.51
AMBRA1-205ENST00000526606 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
AMBRA1-205ENST00000526606 PPP1R15AO75807 674 aaPredicted RBP30.75■■■□□ 2.51
AMBRA1-205ENST00000526606 RXRBP28702 533 aa30.75■■■□□ 2.51
AMBRA1-205ENST00000526606 RPRD2Q5VT52 1461 aaKnown RBP30.75■■■□□ 2.51
AMBRA1-205ENST00000526606 CADPS2Q86UW7 1296 aa30.74■■■□□ 2.51
AMBRA1-205ENST00000526606 GCC2Q8IWJ2 1684 aa30.74■■■□□ 2.51
AMBRA1-205ENST00000526606 HDGFP51858 240 aaKnown RBP30.73■■■□□ 2.51
AMBRA1-205ENST00000526606 C14orf37Q86TY3 774 aa30.73■■■□□ 2.51
AMBRA1-205ENST00000526606 DIP2AQ14689 1571 aa30.71■■■□□ 2.51
AMBRA1-205ENST00000526606 ATF3P18847 181 aa30.7■■■□□ 2.51
AMBRA1-205ENST00000526606 NUTM2DQ5VT03 806 aaPredicted RBP30.7■■■□□ 2.51
AMBRA1-205ENST00000526606 BRINP3Q76B58 766 aa30.7■■■□□ 2.51
AMBRA1-205ENST00000526606 ADGRL2O95490 1459 aa30.69■■■□□ 2.5
AMBRA1-205ENST00000526606 CDK12Q9NYV4 1490 aaPredicted RBP30.68■■■□□ 2.5
AMBRA1-205ENST00000526606 NUTM2BA6NNL0 878 aaPredicted RBP30.67■■■□□ 2.5
AMBRA1-205ENST00000526606 NUTM2EB1AL46 878 aaPredicted RBP30.67■■■□□ 2.5
AMBRA1-205ENST00000526606 NUTM2AQ8IVF1 878 aaPredicted RBP30.67■■■□□ 2.5
AMBRA1-205ENST00000526606 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.66■■■□□ 2.5
AMBRA1-205ENST00000526606 PIK3R4Q99570 1358 aa30.65■■■□□ 2.5
AMBRA1-205ENST00000526606 AFF2P51816 1311 aa30.64■■■□□ 2.5
AMBRA1-205ENST00000526606 PTPRUQ92729 1446 aa30.64■■■□□ 2.49
AMBRA1-205ENST00000526606 ANKRD50Q9ULJ7 1429 aa30.63■■■□□ 2.49
AMBRA1-205ENST00000526606 CHGAP10645 457 aaKnown RBP30.62■■■□□ 2.49
AMBRA1-205ENST00000526606 AMOTL2Q9Y2J4 779 aa30.62■■■□□ 2.49
AMBRA1-205ENST00000526606 SETD5Q9C0A6 1442 aa30.57■■■□□ 2.48
AMBRA1-205ENST00000526606 ASXL1Q8IXJ9 1541 aa30.55■■■□□ 2.48
AMBRA1-205ENST00000526606 APLP2Q06481 763 aa30.54■■■□□ 2.48
AMBRA1-205ENST00000526606 RGS12O14924 1447 aa30.54■■■□□ 2.48
AMBRA1-205ENST00000526606 QTRT2Q9H974 415 aaKnown RBP30.53■■■□□ 2.48
AMBRA1-205ENST00000526606 TRPM2O94759 1503 aa30.52■■■□□ 2.48
AMBRA1-205ENST00000526606 E9PCH4 1651 aa30.52■■■□□ 2.48
AMBRA1-205ENST00000526606 DCCP43146 1447 aa30.52■■■□□ 2.48
AMBRA1-205ENST00000526606 MST1RQ04912 1400 aa30.52■■■□□ 2.48
AMBRA1-205ENST00000526606 DDX17Q92841 729 aaKnown RBP30.5■■■□□ 2.47
AMBRA1-205ENST00000526606 NHSL1Q5SYE7 1610 aa30.5■■■□□ 2.47
AMBRA1-205ENST00000526606 UNC13BO14795 1591 aa30.49■■■□□ 2.47
AMBRA1-205ENST00000526606 RBM6P78332 1123 aaKnown RBP30.49■■■□□ 2.47
AMBRA1-205ENST00000526606 LRRC59Q96AG4 307 aaKnown RBP30.49■■■□□ 2.47
AMBRA1-205ENST00000526606 FAM50AQ14320 339 aaKnown RBP30.48■■■□□ 2.47
AMBRA1-205ENST00000526606 C8orf37Q96NL8 207 aa30.48■■■□□ 2.47
AMBRA1-205ENST00000526606 XRN1Q8IZH2 1706 aaKnown RBP30.46■■■□□ 2.47
AMBRA1-205ENST00000526606 PNPLA6Q8IY17 1366 aa30.45■■■□□ 2.47
AMBRA1-205ENST00000526606 NRXN3Q9Y4C0 1643 aa30.45■■■□□ 2.47
AMBRA1-205ENST00000526606 METP08581 1390 aa30.41■■■□□ 2.46
AMBRA1-205ENST00000526606 EP400Q96L91 3159 aa30.38■■■□□ 2.45
AMBRA1-205ENST00000526606 SETBP1Q9Y6X0 1596 aa30.37■■■□□ 2.45
AMBRA1-205ENST00000526606 IQGAP3Q86VI3 1631 aa30.36■■■□□ 2.45
AMBRA1-205ENST00000526606 ADAMTS2O95450 1211 aa30.35■■■□□ 2.45
AMBRA1-205ENST00000526606 NGLY1Q96IV0 654 aa30.35■■■□□ 2.45
AMBRA1-205ENST00000526606 ADGRL3Q9HAR2 1447 aa30.33■■■□□ 2.45
AMBRA1-205ENST00000526606 NUP155O75694 1391 aa30.29■■■□□ 2.44
AMBRA1-205ENST00000526606 NALCNQ8IZF0 1738 aa30.29■■■□□ 2.44
AMBRA1-205ENST00000526606 ATAD2Q6PL18 1390 aa30.28■■■□□ 2.44
AMBRA1-205ENST00000526606 C1orf167Q5SNV9 1468 aa30.27■■■□□ 2.44
AMBRA1-205ENST00000526606 USP21Q9UK80 565 aa30.26■■■□□ 2.43
AMBRA1-205ENST00000526606 ROCK1Q13464 1354 aa30.26■■■□□ 2.43
AMBRA1-205ENST00000526606 LAMC1P11047 1609 aa30.25■■■□□ 2.43
AMBRA1-205ENST00000526606 SOS2Q07890 1332 aaPredicted RBP30.25■■■□□ 2.43
AMBRA1-205ENST00000526606 FNBP4Q8N3X1 1017 aaPredicted RBP30.25■■■□□ 2.43
AMBRA1-205ENST00000526606 ORAI2Q96SN7 254 aa30.24■■■□□ 2.43
AMBRA1-205ENST00000526606 ZNF326Q5BKZ1 582 aaKnown RBP30.22■■■□□ 2.43
AMBRA1-205ENST00000526606 TRPC5Q9UL62 973 aaPredicted RBP30.22■■■□□ 2.43
AMBRA1-205ENST00000526606 ZRANB1Q9UGI0 708 aa30.2■■■□□ 2.43
AMBRA1-205ENST00000526606 ATRNO75882 1429 aa30.19■■■□□ 2.42
AMBRA1-205ENST00000526606 SPHKAPQ2M3C7 1700 aa30.16■■■□□ 2.42
AMBRA1-205ENST00000526606 PTCH1Q13635 1447 aa30.16■■■□□ 2.42
AMBRA1-205ENST00000526606 NEXMIFQ5QGS0 1516 aa30.16■■■□□ 2.42
AMBRA1-205ENST00000526606 ROBO2Q9HCK4 1378 aa30.14■■■□□ 2.41
AMBRA1-205ENST00000526606 BCL9LQ86UU0 1499 aa30.12■■■□□ 2.41
AMBRA1-205ENST00000526606 COL22A1Q8NFW1 1626 aaPredicted RBP30.11■■■□□ 2.41
AMBRA1-205ENST00000526606 CCDC125Q86Z20 511 aa30.09■■■□□ 2.41
AMBRA1-205ENST00000526606 CLTCL1P53675 1640 aa30.08■■■□□ 2.41
AMBRA1-205ENST00000526606 MYOM2P54296 1465 aa30.07■■■□□ 2.4
AMBRA1-205ENST00000526606 FOXD1Q16676 465 aa30.06■■■□□ 2.4
AMBRA1-205ENST00000526606 ITGAEP38570 1179 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms