RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 SLC52A1Q9NWF4 448 aa19.32■□□□□ 0.68
SDHD-211ENST00000525987 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
SDHD-211ENST00000525987 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
SDHD-211ENST00000525987 STAG3Q9UJ98 1225 aa19.31■□□□□ 0.68
SDHD-211ENST00000525987 ITGAEP38570 1179 aa19.3■□□□□ 0.68
SDHD-211ENST00000525987 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
SDHD-211ENST00000525987 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
SDHD-211ENST00000525987 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
SDHD-211ENST00000525987 NUP155O75694 1391 aa19.26■□□□□ 0.67
SDHD-211ENST00000525987 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
SDHD-211ENST00000525987 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
SDHD-211ENST00000525987 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
SDHD-211ENST00000525987 KCNA6P17658 529 aa19.25■□□□□ 0.67
SDHD-211ENST00000525987 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
SDHD-211ENST00000525987 ADAMTS13Q76LX8 1427 aa19.24■□□□□ 0.67
SDHD-211ENST00000525987 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
SDHD-211ENST00000525987 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
SDHD-211ENST00000525987 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
SDHD-211ENST00000525987 NAIPQ13075 1403 aa19.22■□□□□ 0.67
SDHD-211ENST00000525987 SOCS7O14512 581 aa19.2■□□□□ 0.66
SDHD-211ENST00000525987 NUTM2DQ5VT03 806 aaPredicted RBP19.2■□□□□ 0.66
SDHD-211ENST00000525987 DIP2AQ14689 1571 aa19.18■□□□□ 0.66
SDHD-211ENST00000525987 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SDHD-211ENST00000525987 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.17■□□□□ 0.66
SDHD-211ENST00000525987 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
SDHD-211ENST00000525987 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
SDHD-211ENST00000525987 PROSER2Q86WR7 435 aaPredicted RBP19.16■□□□□ 0.66
SDHD-211ENST00000525987 PTPRUQ92729 1446 aa19.16■□□□□ 0.66
SDHD-211ENST00000525987 XRN1Q8IZH2 1706 aaKnown RBP19.15■□□□□ 0.66
SDHD-211ENST00000525987 TRPM2O94759 1503 aa19.15■□□□□ 0.66
SDHD-211ENST00000525987 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
SDHD-211ENST00000525987 NEXMIFQ5QGS0 1516 aa19.14■□□□□ 0.65
SDHD-211ENST00000525987 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
SDHD-211ENST00000525987 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
SDHD-211ENST00000525987 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
SDHD-211ENST00000525987 BCANQ96GW7 911 aa19.11■□□□□ 0.65
SDHD-211ENST00000525987 HFM1A2PYH4 1435 aa19.1■□□□□ 0.65
SDHD-211ENST00000525987 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
SDHD-211ENST00000525987 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDHD-211ENST00000525987 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
SDHD-211ENST00000525987 PIK3R4Q99570 1358 aa19.07■□□□□ 0.64
SDHD-211ENST00000525987 PPLO60437 1756 aa19.07■□□□□ 0.64
SDHD-211ENST00000525987 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
SDHD-211ENST00000525987 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
SDHD-211ENST00000525987 MSH6P52701 1360 aa19.06■□□□□ 0.64
SDHD-211ENST00000525987 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
SDHD-211ENST00000525987 NALCNQ8IZF0 1738 aa19.04■□□□□ 0.64
SDHD-211ENST00000525987 METP08581 1390 aa19.04■□□□□ 0.64
SDHD-211ENST00000525987 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SDHD-211ENST00000525987 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
SDHD-211ENST00000525987 IFT172Q9UG01 1749 aa19■□□□□ 0.63
SDHD-211ENST00000525987 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
SDHD-211ENST00000525987 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
SDHD-211ENST00000525987 SHPRHQ149N8 1683 aa18.97■□□□□ 0.63
SDHD-211ENST00000525987 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
SDHD-211ENST00000525987 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SDHD-211ENST00000525987 FOXD1Q16676 465 aa18.95■□□□□ 0.62
SDHD-211ENST00000525987 C19orf44Q9H6X5 657 aa18.95■□□□□ 0.62
SDHD-211ENST00000525987 LRP6O75581 1613 aa18.94■□□□□ 0.62
SDHD-211ENST00000525987 MST1RQ04912 1400 aa18.93■□□□□ 0.62
SDHD-211ENST00000525987 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
SDHD-211ENST00000525987 DCCP43146 1447 aa18.92■□□□□ 0.62
SDHD-211ENST00000525987 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
SDHD-211ENST00000525987 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
SDHD-211ENST00000525987 BRINP3Q76B58 766 aa18.9■□□□□ 0.62
SDHD-211ENST00000525987 C14orf37Q86TY3 774 aa18.9■□□□□ 0.62
SDHD-211ENST00000525987 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
SDHD-211ENST00000525987 JCADQ9P266 1359 aa18.9■□□□□ 0.62
SDHD-211ENST00000525987 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
SDHD-211ENST00000525987 SPATA31E1Q6ZUB1 1445 aa18.89■□□□□ 0.61
SDHD-211ENST00000525987 PRAG1Q86YV5 1406 aa18.89■□□□□ 0.61
SDHD-211ENST00000525987 ATF3P18847 181 aa18.88■□□□□ 0.61
SDHD-211ENST00000525987 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
SDHD-211ENST00000525987 LAMC1P11047 1609 aa18.88■□□□□ 0.61
SDHD-211ENST00000525987 PTCH1Q13635 1447 aa18.87■□□□□ 0.61
SDHD-211ENST00000525987 MPHOSPH9Q99550 1183 aa18.85■□□□□ 0.61
SDHD-211ENST00000525987 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
SDHD-211ENST00000525987 ADGRF5Q8IZF2 1346 aa18.84■□□□□ 0.61
SDHD-211ENST00000525987 KNDC1Q76NI1 1749 aa18.83■□□□□ 0.61
SDHD-211ENST00000525987 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
SDHD-211ENST00000525987 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
SDHD-211ENST00000525987 C1orf167Q5SNV9 1468 aa18.81■□□□□ 0.6
SDHD-211ENST00000525987 CCDC144AA2RUR9 1427 aa18.81■□□□□ 0.6
SDHD-211ENST00000525987 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
SDHD-211ENST00000525987 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
SDHD-211ENST00000525987 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
SDHD-211ENST00000525987 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
SDHD-211ENST00000525987 RGL3Q3MIN7 710 aa18.76■□□□□ 0.59
SDHD-211ENST00000525987 CDC42BPGQ6DT37 1551 aa18.76■□□□□ 0.59
SDHD-211ENST00000525987 TECPR2O15040 1411 aa18.74■□□□□ 0.59
SDHD-211ENST00000525987 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
SDHD-211ENST00000525987 RAB3GAP2Q9H2M9 1393 aa18.74■□□□□ 0.59
SDHD-211ENST00000525987 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
SDHD-211ENST00000525987 FMN2Q9NZ56 1722 aa18.74■□□□□ 0.59
SDHD-211ENST00000525987 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
SDHD-211ENST00000525987 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
SDHD-211ENST00000525987 COL22A1Q8NFW1 1626 aaPredicted RBP18.71■□□□□ 0.59
SDHD-211ENST00000525987 ANKRD30BQ9BXX2 1392 aa18.71■□□□□ 0.59
SDHD-211ENST00000525987 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
SDHD-211ENST00000525987 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms