RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 PIAS4Q8N2W9 510 aaPredicted RBP14.45□□□□□ -0.1
SF3B2-204ENST00000525207 NUP155O75694 1391 aa14.44□□□□□ -0.1
SF3B2-204ENST00000525207 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
SF3B2-204ENST00000525207 NAIPQ13075 1403 aa14.42□□□□□ -0.1
SF3B2-204ENST00000525207 RIMS2Q9UQ26 1411 aa14.41□□□□□ -0.1
SF3B2-204ENST00000525207 DIP2AQ14689 1571 aa14.41□□□□□ -0.1
SF3B2-204ENST00000525207 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
SF3B2-204ENST00000525207 PLEKHG1Q9ULL1 1385 aa14.4□□□□□ -0.1
SF3B2-204ENST00000525207 TOM1O60784 492 aa14.4□□□□□ -0.1
SF3B2-204ENST00000525207 CHD2O14647 1828 aaKnown RBP14.39□□□□□ -0.11
SF3B2-204ENST00000525207 CLTCL1P53675 1640 aa14.39□□□□□ -0.11
SF3B2-204ENST00000525207 TRPM2O94759 1503 aa14.39□□□□□ -0.11
SF3B2-204ENST00000525207 DISP3Q9P2K9 1392 aa14.37□□□□□ -0.11
SF3B2-204ENST00000525207 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
SF3B2-204ENST00000525207 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
SF3B2-204ENST00000525207 NRXN3Q9Y4C0 1643 aa14.36□□□□□ -0.11
SF3B2-204ENST00000525207 MED1Q15648 1581 aaPredicted RBP14.35□□□□□ -0.11
SF3B2-204ENST00000525207 SLC26A8Q96RN1 970 aa14.35□□□□□ -0.11
SF3B2-204ENST00000525207 KIF1BO60333 1816 aa14.34□□□□□ -0.11
SF3B2-204ENST00000525207 ADAMTS13Q76LX8 1427 aa14.34□□□□□ -0.11
SF3B2-204ENST00000525207 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
SF3B2-204ENST00000525207 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
SF3B2-204ENST00000525207 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
SF3B2-204ENST00000525207 KCNA6P17658 529 aa14.33□□□□□ -0.12
SF3B2-204ENST00000525207 HSPA1LP34931 641 aa14.33□□□□□ -0.12
SF3B2-204ENST00000525207 NEXMIFQ5QGS0 1516 aa14.32□□□□□ -0.12
SF3B2-204ENST00000525207 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
SF3B2-204ENST00000525207 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
SF3B2-204ENST00000525207 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
SF3B2-204ENST00000525207 XRN1Q8IZH2 1706 aaKnown RBP14.31□□□□□ -0.12
SF3B2-204ENST00000525207 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
SF3B2-204ENST00000525207 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
SF3B2-204ENST00000525207 BCANQ96GW7 911 aa14.28□□□□□ -0.12
SF3B2-204ENST00000525207 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.12
SF3B2-204ENST00000525207 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
SF3B2-204ENST00000525207 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
SF3B2-204ENST00000525207 MSH6P52701 1360 aa14.26□□□□□ -0.13
SF3B2-204ENST00000525207 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
SF3B2-204ENST00000525207 PPLO60437 1756 aa14.25□□□□□ -0.13
SF3B2-204ENST00000525207 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.25□□□□□ -0.13
SF3B2-204ENST00000525207 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
SF3B2-204ENST00000525207 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
SF3B2-204ENST00000525207 PROSER2Q86WR7 435 aaPredicted RBP14.25□□□□□ -0.13
SF3B2-204ENST00000525207 PTPRUQ92729 1446 aa14.24□□□□□ -0.13
SF3B2-204ENST00000525207 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
SF3B2-204ENST00000525207 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
SF3B2-204ENST00000525207 PHLPP1O60346 1717 aa14.21□□□□□ -0.13
SF3B2-204ENST00000525207 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
SF3B2-204ENST00000525207 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.13
SF3B2-204ENST00000525207 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
SF3B2-204ENST00000525207 NALCNQ8IZF0 1738 aa14.21□□□□□ -0.14
SF3B2-204ENST00000525207 DCCP43146 1447 aa14.2□□□□□ -0.14
SF3B2-204ENST00000525207 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
SF3B2-204ENST00000525207 METP08581 1390 aa14.18□□□□□ -0.14
SF3B2-204ENST00000525207 AHDC1Q5TGY3 1603 aaPredicted RBP14.18□□□□□ -0.14
SF3B2-204ENST00000525207 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
SF3B2-204ENST00000525207 CCDC144AA2RUR9 1427 aa14.16□□□□□ -0.14
SF3B2-204ENST00000525207 PTCH1Q13635 1447 aa14.16□□□□□ -0.14
SF3B2-204ENST00000525207 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
SF3B2-204ENST00000525207 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
SF3B2-204ENST00000525207 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
SF3B2-204ENST00000525207 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
SF3B2-204ENST00000525207 SETD5Q9C0A6 1442 aa14.14□□□□□ -0.15
SF3B2-204ENST00000525207 NHSL1Q5SYE7 1610 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 SOCS7O14512 581 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 CADPS2Q86UW7 1296 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 RPGRIP1LQ68CZ1 1315 aa14.13□□□□□ -0.15
SF3B2-204ENST00000525207 ASXL1Q8IXJ9 1541 aa14.12□□□□□ -0.15
SF3B2-204ENST00000525207 C19orf44Q9H6X5 657 aa14.12□□□□□ -0.15
SF3B2-204ENST00000525207 MST1RQ04912 1400 aa14.12□□□□□ -0.15
SF3B2-204ENST00000525207 KNDC1Q76NI1 1749 aa14.12□□□□□ -0.15
SF3B2-204ENST00000525207 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
SF3B2-204ENST00000525207 RAB3GAP2Q9H2M9 1393 aa14.1□□□□□ -0.15
SF3B2-204ENST00000525207 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
SF3B2-204ENST00000525207 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
SF3B2-204ENST00000525207 ATF3P18847 181 aa14.09□□□□□ -0.15
SF3B2-204ENST00000525207 JCADQ9P266 1359 aa14.09□□□□□ -0.15
SF3B2-204ENST00000525207 LAMC1P11047 1609 aa14.08□□□□□ -0.15
SF3B2-204ENST00000525207 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
SF3B2-204ENST00000525207 CDC42BPGQ6DT37 1551 aa14.08□□□□□ -0.16
SF3B2-204ENST00000525207 ANKRD30BQ9BXX2 1392 aa14.08□□□□□ -0.16
SF3B2-204ENST00000525207 ROBO2Q9HCK4 1378 aa14.08□□□□□ -0.16
SF3B2-204ENST00000525207 MYOM2P54296 1465 aa14.07□□□□□ -0.16
SF3B2-204ENST00000525207 TECPR2O15040 1411 aa14.07□□□□□ -0.16
SF3B2-204ENST00000525207 LRP6O75581 1613 aa14.06□□□□□ -0.16
SF3B2-204ENST00000525207 MSH5O43196 834 aa14.06□□□□□ -0.16
SF3B2-204ENST00000525207 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
SF3B2-204ENST00000525207 NRXN1Q9ULB1 1477 aa14.06□□□□□ -0.16
SF3B2-204ENST00000525207 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
SF3B2-204ENST00000525207 RGS17Q9UGC6 210 aaPredicted RBP14.03□□□□□ -0.16
SF3B2-204ENST00000525207 C1orf167Q5SNV9 1468 aa14.03□□□□□ -0.16
SF3B2-204ENST00000525207 SPATA31A6Q5VVP1 1343 aa14.01□□□□□ -0.17
SF3B2-204ENST00000525207 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
SF3B2-204ENST00000525207 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
SF3B2-204ENST00000525207 FMN2Q9NZ56 1722 aa13.99□□□□□ -0.17
SF3B2-204ENST00000525207 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
SF3B2-204ENST00000525207 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
SF3B2-204ENST00000525207 ADGRB1O14514 1584 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms