RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-219ENST00000525045 MSH6P52701 1360 aa21.84■■□□□ 1.09
PABPC4-219ENST00000525045 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.09
PABPC4-219ENST00000525045 RGS17Q9UGC6 210 aaPredicted RBP21.83■■□□□ 1.09
PABPC4-219ENST00000525045 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
PABPC4-219ENST00000525045 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
PABPC4-219ENST00000525045 PLEKHG1Q9ULL1 1385 aa21.8■■□□□ 1.08
PABPC4-219ENST00000525045 RBM33Q96EV2 1170 aaKnown RBP21.8■■□□□ 1.08
PABPC4-219ENST00000525045 SLAIN2Q9P270 581 aa21.8■■□□□ 1.08
PABPC4-219ENST00000525045 TBX22Q9Y458 520 aa21.79■■□□□ 1.08
PABPC4-219ENST00000525045 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
PABPC4-219ENST00000525045 ROBO1Q9Y6N7 1651 aa21.78■■□□□ 1.08
PABPC4-219ENST00000525045 RIMS2Q9UQ26 1411 aa21.77■■□□□ 1.08
PABPC4-219ENST00000525045 ZFYVE9O95405 1425 aa21.76■■□□□ 1.07
PABPC4-219ENST00000525045 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
PABPC4-219ENST00000525045 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
PABPC4-219ENST00000525045 CHD2O14647 1828 aaKnown RBP21.73■■□□□ 1.07
PABPC4-219ENST00000525045 POTEAQ6S8J7 498 aa21.72■■□□□ 1.07
PABPC4-219ENST00000525045 JCADQ9P266 1359 aa21.72■■□□□ 1.07
PABPC4-219ENST00000525045 C14orf37Q86TY3 774 aa21.71■■□□□ 1.07
PABPC4-219ENST00000525045 TMEM131LA2VDJ0 1609 aa21.7■■□□□ 1.06
PABPC4-219ENST00000525045 GCC2Q8IWJ2 1684 aa21.7■■□□□ 1.06
PABPC4-219ENST00000525045 MYO5BQ9ULV0 1848 aa21.7■■□□□ 1.06
PABPC4-219ENST00000525045 PIK3R4Q99570 1358 aa21.7■■□□□ 1.06
PABPC4-219ENST00000525045 ROCK1Q13464 1354 aa21.69■■□□□ 1.06
PABPC4-219ENST00000525045 CADPS2Q86UW7 1296 aa21.68■■□□□ 1.06
PABPC4-219ENST00000525045 PHLPP1O60346 1717 aa21.67■■□□□ 1.06
PABPC4-219ENST00000525045 C19orf44Q9H6X5 657 aa21.67■■□□□ 1.06
PABPC4-219ENST00000525045 UNC13BO14795 1591 aa21.66■■□□□ 1.06
PABPC4-219ENST00000525045 ATF3P18847 181 aa21.66■■□□□ 1.06
PABPC4-219ENST00000525045 DIP2AQ14689 1571 aa21.64■■□□□ 1.05
PABPC4-219ENST00000525045 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
PABPC4-219ENST00000525045 NUTM2DQ5VT03 806 aaPredicted RBP21.63■■□□□ 1.05
PABPC4-219ENST00000525045 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
PABPC4-219ENST00000525045 NUP155O75694 1391 aa21.62■■□□□ 1.05
PABPC4-219ENST00000525045 E9PCH4 1651 aa21.62■■□□□ 1.05
PABPC4-219ENST00000525045 AMOTL2Q9Y2J4 779 aa21.6■■□□□ 1.05
PABPC4-219ENST00000525045 IQGAP3Q86VI3 1631 aa21.59■■□□□ 1.05
PABPC4-219ENST00000525045 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
PABPC4-219ENST00000525045 ZNF772Q68DY9 489 aaPredicted RBP21.58■■□□□ 1.05
PABPC4-219ENST00000525045 TRPM2O94759 1503 aa21.57■■□□□ 1.04
PABPC4-219ENST00000525045 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
PABPC4-219ENST00000525045 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.56■■□□□ 1.04
PABPC4-219ENST00000525045 ITGAEP38570 1179 aa21.55■■□□□ 1.04
PABPC4-219ENST00000525045 ZNF326Q5BKZ1 582 aaKnown RBP21.53■■□□□ 1.04
PABPC4-219ENST00000525045 AHDC1Q5TGY3 1603 aaPredicted RBP21.53■■□□□ 1.04
PABPC4-219ENST00000525045 DCCP43146 1447 aa21.52■■□□□ 1.04
PABPC4-219ENST00000525045 BRINP3Q76B58 766 aa21.51■■□□□ 1.03
PABPC4-219ENST00000525045 PTPRUQ92729 1446 aa21.5■■□□□ 1.03
PABPC4-219ENST00000525045 SHPRHQ149N8 1683 aa21.47■■□□□ 1.03
PABPC4-219ENST00000525045 LRP6O75581 1613 aa21.47■■□□□ 1.03
PABPC4-219ENST00000525045 RXRBP28702 533 aa21.46■■□□□ 1.03
PABPC4-219ENST00000525045 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
PABPC4-219ENST00000525045 SETBP1Q9Y6X0 1596 aa21.45■■□□□ 1.02
PABPC4-219ENST00000525045 NUTM2BA6NNL0 878 aaPredicted RBP21.44■■□□□ 1.02
PABPC4-219ENST00000525045 NUTM2EB1AL46 878 aaPredicted RBP21.44■■□□□ 1.02
PABPC4-219ENST00000525045 NUTM2AQ8IVF1 878 aaPredicted RBP21.44■■□□□ 1.02
PABPC4-219ENST00000525045 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
PABPC4-219ENST00000525045 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
PABPC4-219ENST00000525045 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
PABPC4-219ENST00000525045 XRN1Q8IZH2 1706 aaKnown RBP21.41■■□□□ 1.02
PABPC4-219ENST00000525045 METP08581 1390 aa21.41■■□□□ 1.02
PABPC4-219ENST00000525045 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.02
PABPC4-219ENST00000525045 SETD1AO15047 1707 aaKnown RBP21.41■■□□□ 1.02
PABPC4-219ENST00000525045 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
PABPC4-219ENST00000525045 MST1RQ04912 1400 aa21.4■■□□□ 1.02
PABPC4-219ENST00000525045 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.02
PABPC4-219ENST00000525045 VGFO15240 615 aaPredicted RBP21.39■■□□□ 1.01
PABPC4-219ENST00000525045 PPARGC1BQ86YN6 1023 aaKnown RBP21.38■■□□□ 1.01
PABPC4-219ENST00000525045 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
PABPC4-219ENST00000525045 AFF2P51816 1311 aa21.37■■□□□ 1.01
PABPC4-219ENST00000525045 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
PABPC4-219ENST00000525045 NHSL1Q5SYE7 1610 aa21.34■■□□□ 1.01
PABPC4-219ENST00000525045 KIF1BO60333 1816 aa21.34■■□□□ 1.01
PABPC4-219ENST00000525045 RPGRIP1LQ68CZ1 1315 aa21.33■■□□□ 1.01
PABPC4-219ENST00000525045 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1
PABPC4-219ENST00000525045 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
PABPC4-219ENST00000525045 CLTCL1P53675 1640 aa21.31■■□□□ 1
PABPC4-219ENST00000525045 RBM6P78332 1123 aaKnown RBP21.31■■□□□ 1
PABPC4-219ENST00000525045 C8orf37Q96NL8 207 aa21.31■■□□□ 1
PABPC4-219ENST00000525045 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
PABPC4-219ENST00000525045 C1orf167Q5SNV9 1468 aa21.29■■□□□ 1
PABPC4-219ENST00000525045 DDX17Q92841 729 aaKnown RBP21.29■■□□□ 1
PABPC4-219ENST00000525045 NAIPQ13075 1403 aa21.29■■□□□ 1
PABPC4-219ENST00000525045 NGLY1Q96IV0 654 aa21.28■■□□□ 1
PABPC4-219ENST00000525045 PTCH1Q13635 1447 aa21.28■■□□□ 1
PABPC4-219ENST00000525045 RRBP1Q9P2E9 1410 aaKnown RBP21.28■■□□□ 1
PABPC4-219ENST00000525045 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
PABPC4-219ENST00000525045 NALCNQ8IZF0 1738 aa21.26■□□□□ 0.99
PABPC4-219ENST00000525045 SOS2Q07890 1332 aaPredicted RBP21.26■□□□□ 0.99
PABPC4-219ENST00000525045 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
PABPC4-219ENST00000525045 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
PABPC4-219ENST00000525045 ORAI2Q96SN7 254 aa21.23■□□□□ 0.99
PABPC4-219ENST00000525045 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
PABPC4-219ENST00000525045 PRAG1Q86YV5 1406 aa21.21■□□□□ 0.99
PABPC4-219ENST00000525045 LAMC1P11047 1609 aa21.2■□□□□ 0.98
PABPC4-219ENST00000525045 TRPC5Q9UL62 973 aaPredicted RBP21.2■□□□□ 0.98
PABPC4-219ENST00000525045 USP21Q9UK80 565 aa21.19■□□□□ 0.98
PABPC4-219ENST00000525045 NPHP3Q7Z494 1330 aa21.18■□□□□ 0.98
PABPC4-219ENST00000525045 RGS12O14924 1447 aa21.18■□□□□ 0.98
PABPC4-219ENST00000525045 FOXD1Q16676 465 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms