RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 NKTRP30414 1462 aaKnown RBP19.8■□□□□ 0.76
SF3B2-203ENST00000524627 NWD1Q149M9 1564 aa19.8■□□□□ 0.76
SF3B2-203ENST00000524627 ANKRD50Q9ULJ7 1429 aa19.8■□□□□ 0.76
SF3B2-203ENST00000524627 RPRD2Q5VT52 1461 aaKnown RBP19.79■□□□□ 0.76
SF3B2-203ENST00000524627 MYO5BQ9ULV0 1848 aa19.77■□□□□ 0.76
SF3B2-203ENST00000524627 MSH6P52701 1360 aa19.77■□□□□ 0.76
SF3B2-203ENST00000524627 ZFYVE9O95405 1425 aa19.76■□□□□ 0.75
SF3B2-203ENST00000524627 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
SF3B2-203ENST00000524627 PPP1R15AO75807 674 aaPredicted RBP19.76■□□□□ 0.75
SF3B2-203ENST00000524627 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
SF3B2-203ENST00000524627 RIMS2Q9UQ26 1411 aa19.75■□□□□ 0.75
SF3B2-203ENST00000524627 POTEAQ6S8J7 498 aa19.73■□□□□ 0.75
SF3B2-203ENST00000524627 TMEM131LA2VDJ0 1609 aa19.73■□□□□ 0.75
SF3B2-203ENST00000524627 CHD2O14647 1828 aaKnown RBP19.72■□□□□ 0.75
SF3B2-203ENST00000524627 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
SF3B2-203ENST00000524627 HDGFP51858 240 aaKnown RBP19.72■□□□□ 0.75
SF3B2-203ENST00000524627 SLAIN2Q9P270 581 aa19.72■□□□□ 0.75
SF3B2-203ENST00000524627 PHLPP1O60346 1717 aa19.71■□□□□ 0.75
SF3B2-203ENST00000524627 UNC13BO14795 1591 aa19.7■□□□□ 0.74
SF3B2-203ENST00000524627 NUTM2DQ5VT03 806 aaPredicted RBP19.68■□□□□ 0.74
SF3B2-203ENST00000524627 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.67■□□□□ 0.74
SF3B2-203ENST00000524627 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
SF3B2-203ENST00000524627 E9PCH4 1651 aa19.67■□□□□ 0.74
SF3B2-203ENST00000524627 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
SF3B2-203ENST00000524627 JCADQ9P266 1359 aa19.66■□□□□ 0.74
SF3B2-203ENST00000524627 ADAMTS13Q76LX8 1427 aa19.64■□□□□ 0.73
SF3B2-203ENST00000524627 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
SF3B2-203ENST00000524627 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
SF3B2-203ENST00000524627 DIP2AQ14689 1571 aa19.62■□□□□ 0.73
SF3B2-203ENST00000524627 NCOA3Q9Y6Q9 1424 aa19.62■□□□□ 0.73
SF3B2-203ENST00000524627 ROCK1Q13464 1354 aa19.62■□□□□ 0.73
SF3B2-203ENST00000524627 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
SF3B2-203ENST00000524627 NUP155O75694 1391 aa19.59■□□□□ 0.73
SF3B2-203ENST00000524627 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
SF3B2-203ENST00000524627 ATF3P18847 181 aa19.59■□□□□ 0.73
SF3B2-203ENST00000524627 CADPS2Q86UW7 1296 aa19.59■□□□□ 0.73
SF3B2-203ENST00000524627 C19orf44Q9H6X5 657 aa19.59■□□□□ 0.73
SF3B2-203ENST00000524627 SETD1AO15047 1707 aaKnown RBP19.59■□□□□ 0.73
SF3B2-203ENST00000524627 ITGAEP38570 1179 aa19.58■□□□□ 0.72
SF3B2-203ENST00000524627 TRPM2O94759 1503 aa19.57■□□□□ 0.72
SF3B2-203ENST00000524627 LRP6O75581 1613 aa19.56■□□□□ 0.72
SF3B2-203ENST00000524627 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
SF3B2-203ENST00000524627 PTPRUQ92729 1446 aa19.56■□□□□ 0.72
SF3B2-203ENST00000524627 SPATA31A6Q5VVP1 1343 aa19.55■□□□□ 0.72
SF3B2-203ENST00000524627 AHDC1Q5TGY3 1603 aaPredicted RBP19.55■□□□□ 0.72
SF3B2-203ENST00000524627 MEX3CQ5U5Q3 659 aaKnown RBP19.55■□□□□ 0.72
SF3B2-203ENST00000524627 BRINP3Q76B58 766 aa19.51■□□□□ 0.71
SF3B2-203ENST00000524627 SHPRHQ149N8 1683 aa19.51■□□□□ 0.71
SF3B2-203ENST00000524627 SPHKAPQ2M3C7 1700 aa19.5■□□□□ 0.71
SF3B2-203ENST00000524627 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
SF3B2-203ENST00000524627 ZNF326Q5BKZ1 582 aaKnown RBP19.49■□□□□ 0.71
SF3B2-203ENST00000524627 ZNF772Q68DY9 489 aaPredicted RBP19.49■□□□□ 0.71
SF3B2-203ENST00000524627 PPARGC1BQ86YN6 1023 aaKnown RBP19.49■□□□□ 0.71
SF3B2-203ENST00000524627 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
SF3B2-203ENST00000524627 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
SF3B2-203ENST00000524627 DCCP43146 1447 aa19.48■□□□□ 0.71
SF3B2-203ENST00000524627 NUTM2BA6NNL0 878 aaPredicted RBP19.47■□□□□ 0.71
SF3B2-203ENST00000524627 NUTM2EB1AL46 878 aaPredicted RBP19.47■□□□□ 0.71
SF3B2-203ENST00000524627 NUTM2AQ8IVF1 878 aaPredicted RBP19.47■□□□□ 0.71
SF3B2-203ENST00000524627 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
SF3B2-203ENST00000524627 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
SF3B2-203ENST00000524627 METP08581 1390 aa19.45■□□□□ 0.7
SF3B2-203ENST00000524627 MST1RQ04912 1400 aa19.44■□□□□ 0.7
SF3B2-203ENST00000524627 CLTCL1P53675 1640 aa19.41■□□□□ 0.7
SF3B2-203ENST00000524627 NHSL1Q5SYE7 1610 aa19.41■□□□□ 0.7
SF3B2-203ENST00000524627 RXRBP28702 533 aa19.41■□□□□ 0.7
SF3B2-203ENST00000524627 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
SF3B2-203ENST00000524627 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
SF3B2-203ENST00000524627 UPF1Q92900 1129 aaKnown RBP eCLIP19.4■□□□□ 0.7
SF3B2-203ENST00000524627 ADGRL3Q9HAR2 1447 aa19.4■□□□□ 0.7
SF3B2-203ENST00000524627 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
SF3B2-203ENST00000524627 AFF2P51816 1311 aa19.39■□□□□ 0.69
SF3B2-203ENST00000524627 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
SF3B2-203ENST00000524627 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
SF3B2-203ENST00000524627 KIF1BO60333 1816 aa19.35■□□□□ 0.69
SF3B2-203ENST00000524627 PNPLA6Q8IY17 1366 aa19.34■□□□□ 0.69
SF3B2-203ENST00000524627 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
SF3B2-203ENST00000524627 CDK12Q9NYV4 1490 aaPredicted RBP19.34■□□□□ 0.69
SF3B2-203ENST00000524627 NAIPQ13075 1403 aa19.32■□□□□ 0.68
SF3B2-203ENST00000524627 C1orf167Q5SNV9 1468 aa19.31■□□□□ 0.68
SF3B2-203ENST00000524627 PTCH1Q13635 1447 aa19.3■□□□□ 0.68
SF3B2-203ENST00000524627 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
SF3B2-203ENST00000524627 ROBO2Q9HCK4 1378 aa19.3■□□□□ 0.68
SF3B2-203ENST00000524627 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
SF3B2-203ENST00000524627 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
SF3B2-203ENST00000524627 ADAMTS2O95450 1211 aa19.28■□□□□ 0.68
SF3B2-203ENST00000524627 RGS12O14924 1447 aa19.27■□□□□ 0.68
SF3B2-203ENST00000524627 ORAI2Q96SN7 254 aa19.27■□□□□ 0.68
SF3B2-203ENST00000524627 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
SF3B2-203ENST00000524627 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
SF3B2-203ENST00000524627 LAMC1P11047 1609 aa19.25■□□□□ 0.67
SF3B2-203ENST00000524627 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
SF3B2-203ENST00000524627 SOS2Q07890 1332 aaPredicted RBP19.24■□□□□ 0.67
SF3B2-203ENST00000524627 RPGRIP1LQ68CZ1 1315 aa19.24■□□□□ 0.67
SF3B2-203ENST00000524627 HFM1A2PYH4 1435 aa19.22■□□□□ 0.67
SF3B2-203ENST00000524627 PRAG1Q86YV5 1406 aa19.22■□□□□ 0.67
SF3B2-203ENST00000524627 PPLO60437 1756 aa19.21■□□□□ 0.67
SF3B2-203ENST00000524627 USP21Q9UK80 565 aa19.19■□□□□ 0.66
SF3B2-203ENST00000524627 FOXD1Q16676 465 aa19.18■□□□□ 0.66
SF3B2-203ENST00000524627 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms