RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 ZPR1O75312 459 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 OATP04181 439 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 COPS2P61201 443 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 FAM161AQ3B820 660 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
LINCR-0001-203ENST00000524047 PXYLP1Q8TE99 480 aa8.16□□□□□ -1.1
LINCR-0001-203ENST00000524047 LAPTM4AQ15012 233 aa8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 PRKD2Q9BZL6 878 aa8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 V9GY48 417 aaPredicted RBP8.15□□□□□ -1.1
LINCR-0001-203ENST00000524047 ACTN4O43707 911 aaKnown RBP8.14□□□□□ -1.11
LINCR-0001-203ENST00000524047 GGCXP38435 758 aa8.14□□□□□ -1.11
LINCR-0001-203ENST00000524047 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
LINCR-0001-203ENST00000524047 BLOC1S3Q6QNY0 202 aa8.13□□□□□ -1.11
LINCR-0001-203ENST00000524047 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
LINCR-0001-203ENST00000524047 GNPATO15228 680 aa8.12□□□□□ -1.11
LINCR-0001-203ENST00000524047 GPR37O15354 613 aa8.12□□□□□ -1.11
LINCR-0001-203ENST00000524047 CFHP08603 1231 aa8.12□□□□□ -1.11
LINCR-0001-203ENST00000524047 SLC10A3P09131 477 aa8.12□□□□□ -1.11
LINCR-0001-203ENST00000524047 VSIG10Q8N0Z9 540 aa8.12□□□□□ -1.11
LINCR-0001-203ENST00000524047 Q6ZNB5 142 aa8.11□□□□□ -1.11
LINCR-0001-203ENST00000524047 FECHP22830 423 aa8.1□□□□□ -1.11
LINCR-0001-203ENST00000524047 GFRA3O60609 400 aa8.09□□□□□ -1.11
LINCR-0001-203ENST00000524047 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
LINCR-0001-203ENST00000524047 NR1I2O75469 434 aa8.07□□□□□ -1.12
LINCR-0001-203ENST00000524047 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
LINCR-0001-203ENST00000524047 NRG2O14511 850 aaPredicted RBP8.06□□□□□ -1.12
LINCR-0001-203ENST00000524047 TLL1O43897 1013 aa8.06□□□□□ -1.12
LINCR-0001-203ENST00000524047 DAXXQ9UER7 740 aaPredicted RBP8.06□□□□□ -1.12
LINCR-0001-203ENST00000524047 GPIHBP1Q8IV16 184 aa8.05□□□□□ -1.12
LINCR-0001-203ENST00000524047 ADH1BP00325 375 aa8.04□□□□□ -1.12
LINCR-0001-203ENST00000524047 ANKLE1Q8NAG6 615 aa8.04□□□□□ -1.12
LINCR-0001-203ENST00000524047 SCUBE3Q8IX30 993 aa8.03□□□□□ -1.12
LINCR-0001-203ENST00000524047 LCE2BO14633 110 aa8.02□□□□□ -1.13
LINCR-0001-203ENST00000524047 S1PR4O95977 384 aa8.02□□□□□ -1.13
LINCR-0001-203ENST00000524047 SLC19A1P41440 591 aa8.02□□□□□ -1.13
LINCR-0001-203ENST00000524047 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
LINCR-0001-203ENST00000524047 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
LINCR-0001-203ENST00000524047 SULF1Q8IWU6 871 aa8.01□□□□□ -1.13
LINCR-0001-203ENST00000524047 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
LINCR-0001-203ENST00000524047 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
LINCR-0001-203ENST00000524047 PDZRN3Q9UPQ7 1066 aa8.01□□□□□ -1.13
LINCR-0001-203ENST00000524047 PUS10Q3MIT2 529 aaKnown RBP8□□□□□ -1.13
LINCR-0001-203ENST00000524047 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
LINCR-0001-203ENST00000524047 DDX11L8A8MPP1 907 aa7.99□□□□□ -1.13
LINCR-0001-203ENST00000524047 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
LINCR-0001-203ENST00000524047 SPRYD7Q5W111 196 aa7.99□□□□□ -1.13
LINCR-0001-203ENST00000524047 NLRP7Q8WX94 980 aa7.99□□□□□ -1.13
LINCR-0001-203ENST00000524047 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 GCGRP47871 477 aa7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 FUT2Q10981 343 aa7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 MORN1Q5T089 497 aa7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 ZNF598Q86UK7 904 aaKnown RBP7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 SPSB2Q99619 263 aa7.98□□□□□ -1.13
LINCR-0001-203ENST00000524047 MAP2K5Q13163 448 aa7.97□□□□□ -1.13
LINCR-0001-203ENST00000524047 LIAT1Q6ZQX7 453 aa7.97□□□□□ -1.13
LINCR-0001-203ENST00000524047 TRIM67Q6ZTA4 783 aa7.97□□□□□ -1.13
LINCR-0001-203ENST00000524047 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
LINCR-0001-203ENST00000524047 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.14
LINCR-0001-203ENST00000524047 PRR20EP86478 221 aa7.95□□□□□ -1.14
LINCR-0001-203ENST00000524047 PRR20CP86479 221 aa7.95□□□□□ -1.14
LINCR-0001-203ENST00000524047 PRR20DP86480 221 aa7.95□□□□□ -1.14
LINCR-0001-203ENST00000524047 PRR20BP86481 221 aa7.95□□□□□ -1.14
LINCR-0001-203ENST00000524047 PRR20AP86496 221 aa7.95□□□□□ -1.14
LINCR-0001-203ENST00000524047 PLA2G2CQ5R387 149 aa7.94□□□□□ -1.14
LINCR-0001-203ENST00000524047 SLC27A5Q9Y2P5 690 aa7.94□□□□□ -1.14
LINCR-0001-203ENST00000524047 IRF6O14896 467 aa7.93□□□□□ -1.14
LINCR-0001-203ENST00000524047 FMNL1O95466 1100 aaPredicted RBP7.93□□□□□ -1.14
LINCR-0001-203ENST00000524047 MINK1Q8N4C8 1332 aaPredicted RBP7.93□□□□□ -1.14
LINCR-0001-203ENST00000524047 GRIPAP1Q4V328 841 aa7.92□□□□□ -1.14
LINCR-0001-203ENST00000524047 ZNF697Q5TEC3 545 aa7.92□□□□□ -1.14
LINCR-0001-203ENST00000524047 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
LINCR-0001-203ENST00000524047 CD46P15529 392 aa7.91□□□□□ -1.14
LINCR-0001-203ENST00000524047 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
LINCR-0001-203ENST00000524047 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
LINCR-0001-203ENST00000524047 GDF9O60383 454 aa7.9□□□□□ -1.14
LINCR-0001-203ENST00000524047 DGAT1O75907 488 aa7.89□□□□□ -1.15
LINCR-0001-203ENST00000524047 RPIAP49247 311 aa7.89□□□□□ -1.15
LINCR-0001-203ENST00000524047 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
LINCR-0001-203ENST00000524047 PKDCCQ504Y2 493 aa7.88□□□□□ -1.15
LINCR-0001-203ENST00000524047 LMOD2Q6P5Q4 547 aa7.88□□□□□ -1.15
LINCR-0001-203ENST00000524047 FCF1Q9Y324 198 aaKnown RBP7.88□□□□□ -1.15
LINCR-0001-203ENST00000524047 Q3C1V9 767 aa7.87□□□□□ -1.15
LINCR-0001-203ENST00000524047 KDM4AO75164 1064 aa7.86□□□□□ -1.15
LINCR-0001-203ENST00000524047 MDM2Q00987 491 aaPredicted RBP7.86□□□□□ -1.15
LINCR-0001-203ENST00000524047 RNF19BQ6ZMZ0 732 aa7.86□□□□□ -1.15
LINCR-0001-203ENST00000524047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINCR-0001-203ENST00000524047 CCDC102AQ96A19 550 aa7.86□□□□□ -1.15
LINCR-0001-203ENST00000524047 TNFRSF10AO00220 468 aa7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 CD2BP2O95400 341 aaKnown RBP7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 USP46P62068 366 aa7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 MYT1Q01538 1121 aa7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 PRDM9Q9NQV7 894 aa7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
LINCR-0001-203ENST00000524047 ZNF787Q6DD87 383 aa7.84□□□□□ -1.15
LINCR-0001-203ENST00000524047 GPCPD1Q9NPB8 672 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms