RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 EGFL6Q8IUX8 553 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 OTUD6BQ8N6M0 293 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 SPOCK2Q92563 424 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 PCGF6Q9BYE7 350 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 CUX2O14529 1486 aa8.45□□□□□ -1.06
SDC2-208ENST00000523877 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 CCDC96Q2M329 555 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
SDC2-208ENST00000523877 LMOD2Q6P5Q4 547 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 NME8Q8N427 588 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
SDC2-208ENST00000523877 CC2D2AQ9P2K1 1620 aa8.43□□□□□ -1.06
SDC2-208ENST00000523877 WDR78Q5VTH9 848 aa8.43□□□□□ -1.06
SDC2-208ENST00000523877 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
SDC2-208ENST00000523877 SDR16C5Q8N3Y7 309 aa8.43□□□□□ -1.06
SDC2-208ENST00000523877 RBM19Q9Y4C8 960 aaKnown RBP8.43□□□□□ -1.06
SDC2-208ENST00000523877 SSR1P43307 286 aaKnown RBP8.42□□□□□ -1.06
SDC2-208ENST00000523877 MCCD1P59942 119 aaPredicted RBP8.42□□□□□ -1.06
SDC2-208ENST00000523877 MTA3Q9BTC8 594 aa8.42□□□□□ -1.06
SDC2-208ENST00000523877 UBA5Q9GZZ9 404 aa8.42□□□□□ -1.06
SDC2-208ENST00000523877 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
SDC2-208ENST00000523877 FEZ2Q9UHY8 353 aaPredicted RBP8.42□□□□□ -1.06
SDC2-208ENST00000523877 SUPT16HQ9Y5B9 1047 aaKnown RBP8.42□□□□□ -1.06
SDC2-208ENST00000523877 TRIM41Q8WV44 630 aa8.41□□□□□ -1.06
SDC2-208ENST00000523877 MKL1Q969V6 931 aa8.41□□□□□ -1.06
SDC2-208ENST00000523877 TSPAN18Q96SJ8 248 aa8.41□□□□□ -1.06
SDC2-208ENST00000523877 TMEM51Q9NW97 253 aa8.41□□□□□ -1.06
SDC2-208ENST00000523877 AMOTL2Q9Y2J4 779 aa8.41□□□□□ -1.06
SDC2-208ENST00000523877 UNC13AQ9UPW8 1703 aa8.4□□□□□ -1.06
SDC2-208ENST00000523877 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
SDC2-208ENST00000523877 KRBA2Q6ZNG9 492 aa8.4□□□□□ -1.06
SDC2-208ENST00000523877 SLC52A1Q9NWF4 448 aa8.4□□□□□ -1.06
SDC2-208ENST00000523877 NUB1Q9Y5A7 615 aa8.4□□□□□ -1.06
SDC2-208ENST00000523877 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
SDC2-208ENST00000523877 ZRANB2O95218 330 aaKnown RBP eCLIP8.39□□□□□ -1.07
SDC2-208ENST00000523877 RGS3P49796 1198 aa8.39□□□□□ -1.07
SDC2-208ENST00000523877 NBPF6Q5VWK0 638 aa8.39□□□□□ -1.07
SDC2-208ENST00000523877 NBPF5PQ86XG9 351 aaPredicted RBP8.39□□□□□ -1.07
SDC2-208ENST00000523877 PDCD7Q8N8D1 485 aaKnown RBP8.39□□□□□ -1.07
SDC2-208ENST00000523877 NBPF4Q96M43 638 aa8.39□□□□□ -1.07
SDC2-208ENST00000523877 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
SDC2-208ENST00000523877 CIZ1Q9ULV3 898 aaPredicted RBP8.39□□□□□ -1.07
SDC2-208ENST00000523877 CCER2I3L3R5 266 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 LIG1P18858 919 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 LONRF3Q496Y0 759 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 YY1AP1Q9H869 796 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 WDR70Q9NW82 654 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
SDC2-208ENST00000523877 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
SDC2-208ENST00000523877 TNNT2P45379 298 aaPredicted RBP8.37□□□□□ -1.07
SDC2-208ENST00000523877 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
SDC2-208ENST00000523877 UTP14CQ5TAP6 766 aaKnown RBP8.37□□□□□ -1.07
SDC2-208ENST00000523877 ARMCX6Q7L4S7 300 aa8.37□□□□□ -1.07
SDC2-208ENST00000523877 SMAP1Q8IYB5 467 aaPredicted RBP8.37□□□□□ -1.07
SDC2-208ENST00000523877 MSL3Q8N5Y2 521 aaKnown RBP8.37□□□□□ -1.07
SDC2-208ENST00000523877 MORC4Q8TE76 937 aa8.37□□□□□ -1.07
SDC2-208ENST00000523877 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
SDC2-208ENST00000523877 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
SDC2-208ENST00000523877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.36□□□□□ -1.07
SDC2-208ENST00000523877 HIRIP3Q9BW71 556 aaPredicted RBP8.36□□□□□ -1.07
SDC2-208ENST00000523877 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
SDC2-208ENST00000523877 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
SDC2-208ENST00000523877 POLD1P28340 1107 aa8.35□□□□□ -1.07
SDC2-208ENST00000523877 FOXD4Q12950 439 aaPredicted RBP8.35□□□□□ -1.07
SDC2-208ENST00000523877 CXorf38Q8TB03 319 aa8.35□□□□□ -1.07
SDC2-208ENST00000523877 MARVELD3Q96A59 401 aa8.35□□□□□ -1.07
SDC2-208ENST00000523877 RBM28Q9NW13 759 aaKnown RBP8.35□□□□□ -1.07
SDC2-208ENST00000523877 GEMIN8Q9NWZ8 242 aaKnown RBP8.35□□□□□ -1.07
SDC2-208ENST00000523877 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.35□□□□□ -1.07
SDC2-208ENST00000523877 RAI14Q9P0K7 980 aa8.35□□□□□ -1.07
SDC2-208ENST00000523877 WASHC2CQ9Y4E1 1318 aa8.34□□□□□ -1.07
SDC2-208ENST00000523877 RIOK3O14730 519 aaKnown RBP8.34□□□□□ -1.07
SDC2-208ENST00000523877 ECM2O94769 699 aaPredicted RBP8.34□□□□□ -1.07
SDC2-208ENST00000523877 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
SDC2-208ENST00000523877 TMEM121BQ9BXQ6 578 aaPredicted RBP8.34□□□□□ -1.07
SDC2-208ENST00000523877 SLC20A2Q08357 652 aa8.33□□□□□ -1.08
SDC2-208ENST00000523877 ZKSCAN8Q15776 578 aaPredicted RBP8.33□□□□□ -1.08
SDC2-208ENST00000523877 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
SDC2-208ENST00000523877 ZNF467Q7Z7K2 595 aaPredicted RBP8.32□□□□□ -1.08
SDC2-208ENST00000523877 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
SDC2-208ENST00000523877 MAP7D2Q96T17 732 aa8.32□□□□□ -1.08
SDC2-208ENST00000523877 MAP2K1Q02750 393 aaPredicted RBP8.31□□□□□ -1.08
SDC2-208ENST00000523877 MMRN1Q13201 1228 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 MTA1Q13330 715 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 CSPP1Q1MSJ5 1256 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 ZNF280DQ6N043 979 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 FRMD4BQ9Y2L6 1034 aa8.31□□□□□ -1.08
SDC2-208ENST00000523877 GOLGA6CA6NDK9 693 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 GOLGA6BA6NDN3 693 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 EXOC5O00471 708 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 SNPHO15079 494 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 GOLGA6DP0CG33 693 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 DNTTIP2Q5QJE6 756 aaKnown RBP8.3□□□□□ -1.08
SDC2-208ENST00000523877 ZFYVE27Q5T4F4 411 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 CCDC181Q5TID7 509 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms