RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
SGCE-211ENST00000522045 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
SGCE-211ENST00000522045 GNPATO15228 680 aa13.4□□□□□ -0.26
SGCE-211ENST00000522045 COPS2P61201 443 aa13.4□□□□□ -0.26
SGCE-211ENST00000522045 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
SGCE-211ENST00000522045 PXYLP1Q8TE99 480 aa13.4□□□□□ -0.26
SGCE-211ENST00000522045 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
SGCE-211ENST00000522045 GPR37O15354 613 aa13.37□□□□□ -0.27
SGCE-211ENST00000522045 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
SGCE-211ENST00000522045 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
SGCE-211ENST00000522045 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
SGCE-211ENST00000522045 ZPR1O75312 459 aa13.34□□□□□ -0.27
SGCE-211ENST00000522045 CFHP08603 1231 aa13.34□□□□□ -0.27
SGCE-211ENST00000522045 FECHP22830 423 aa13.34□□□□□ -0.27
SGCE-211ENST00000522045 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
SGCE-211ENST00000522045 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
SGCE-211ENST00000522045 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.33□□□□□ -0.28
SGCE-211ENST00000522045 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
SGCE-211ENST00000522045 BLOC1S3Q6QNY0 202 aa13.32□□□□□ -0.28
SGCE-211ENST00000522045 GGCXP38435 758 aa13.31□□□□□ -0.28
SGCE-211ENST00000522045 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
SGCE-211ENST00000522045 SLC10A3P09131 477 aa13.3□□□□□ -0.28
SGCE-211ENST00000522045 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
SGCE-211ENST00000522045 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
SGCE-211ENST00000522045 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
SGCE-211ENST00000522045 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
SGCE-211ENST00000522045 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
SGCE-211ENST00000522045 TLL1O43897 1013 aa13.22□□□□□ -0.29
SGCE-211ENST00000522045 NR1I2O75469 434 aa13.22□□□□□ -0.29
SGCE-211ENST00000522045 RDH13Q8NBN7 331 aa13.21□□□□□ -0.29
SGCE-211ENST00000522045 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
SGCE-211ENST00000522045 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
SGCE-211ENST00000522045 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
SGCE-211ENST00000522045 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
SGCE-211ENST00000522045 Q6ZNB5 142 aa13.17□□□□□ -0.3
SGCE-211ENST00000522045 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
SGCE-211ENST00000522045 RNF223E7ERA6 249 aa13.16□□□□□ -0.3
SGCE-211ENST00000522045 ADH1BP00325 375 aa13.16□□□□□ -0.3
SGCE-211ENST00000522045 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
SGCE-211ENST00000522045 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
SGCE-211ENST00000522045 GFRA3O60609 400 aa13.14□□□□□ -0.31
SGCE-211ENST00000522045 S1PR4O95977 384 aa13.13□□□□□ -0.31
SGCE-211ENST00000522045 SCUBE3Q8IX30 993 aa13.13□□□□□ -0.31
SGCE-211ENST00000522045 FUT2Q10981 343 aa13.11□□□□□ -0.31
SGCE-211ENST00000522045 ANKLE1Q8NAG6 615 aa13.11□□□□□ -0.31
SGCE-211ENST00000522045 GCGRP47871 477 aa13.1□□□□□ -0.31
SGCE-211ENST00000522045 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
SGCE-211ENST00000522045 NRG2O14511 850 aaPredicted RBP13.09□□□□□ -0.31
SGCE-211ENST00000522045 ATP6V1AP38606 617 aa13.09□□□□□ -0.31
SGCE-211ENST00000522045 IRF6O14896 467 aa13.08□□□□□ -0.32
SGCE-211ENST00000522045 MORN1Q5T089 497 aa13.08□□□□□ -0.32
SGCE-211ENST00000522045 SPSB2Q99619 263 aa13.08□□□□□ -0.32
SGCE-211ENST00000522045 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
SGCE-211ENST00000522045 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
SGCE-211ENST00000522045 SLC19A1P41440 591 aa13.07□□□□□ -0.32
SGCE-211ENST00000522045 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
SGCE-211ENST00000522045 GRIPAP1Q4V328 841 aa13.03□□□□□ -0.32
SGCE-211ENST00000522045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.32
SGCE-211ENST00000522045 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
SGCE-211ENST00000522045 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
SGCE-211ENST00000522045 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.33
SGCE-211ENST00000522045 FMNL1O95466 1100 aaPredicted RBP13.01□□□□□ -0.33
SGCE-211ENST00000522045 CD46P15529 392 aa13.01□□□□□ -0.33
SGCE-211ENST00000522045 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
SGCE-211ENST00000522045 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
SGCE-211ENST00000522045 THAP11Q96EK4 314 aa13□□□□□ -0.33
SGCE-211ENST00000522045 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
SGCE-211ENST00000522045 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
SGCE-211ENST00000522045 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
SGCE-211ENST00000522045 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
SGCE-211ENST00000522045 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
SGCE-211ENST00000522045 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
SGCE-211ENST00000522045 ZNF697Q5TEC3 545 aa12.95□□□□□ -0.34
SGCE-211ENST00000522045 KDM4AO75164 1064 aa12.94□□□□□ -0.34
SGCE-211ENST00000522045 CLCN1P35523 988 aa12.94□□□□□ -0.34
SGCE-211ENST00000522045 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
SGCE-211ENST00000522045 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
SGCE-211ENST00000522045 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
SGCE-211ENST00000522045 LCE2BO14633 110 aa12.93□□□□□ -0.34
SGCE-211ENST00000522045 Q3C1V9 767 aa12.93□□□□□ -0.34
SGCE-211ENST00000522045 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
SGCE-211ENST00000522045 FCF1Q9Y324 198 aaKnown RBP12.93□□□□□ -0.34
SGCE-211ENST00000522045 RNF19BQ6ZMZ0 732 aa12.92□□□□□ -0.34
SGCE-211ENST00000522045 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
SGCE-211ENST00000522045 USP46P62068 366 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRR20EP86478 221 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRR20CP86479 221 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRR20DP86480 221 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRR20BP86481 221 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRR20AP86496 221 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 MSS51Q4VC12 460 aa12.91□□□□□ -0.34
SGCE-211ENST00000522045 PRDM9Q9NQV7 894 aa12.9□□□□□ -0.34
SGCE-211ENST00000522045 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
SGCE-211ENST00000522045 RPIAP49247 311 aa12.88□□□□□ -0.35
SGCE-211ENST00000522045 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
SGCE-211ENST00000522045 TNFRSF10AO00220 468 aa12.85□□□□□ -0.35
SGCE-211ENST00000522045 HOXA2O43364 376 aa12.85□□□□□ -0.35
SGCE-211ENST00000522045 GDF9O60383 454 aa12.85□□□□□ -0.35
SGCE-211ENST00000522045 ZMYND10O75800 440 aa12.85□□□□□ -0.35
SGCE-211ENST00000522045 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms