RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 ADGRB3O60242 1522 aa13.27□□□□□ -0.29
SPARC-204ENST00000521569 NWD1Q149M9 1564 aa13.27□□□□□ -0.29
SPARC-204ENST00000521569 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPARC-204ENST00000521569 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
SPARC-204ENST00000521569 MSH6P52701 1360 aa13.24□□□□□ -0.29
SPARC-204ENST00000521569 PIK3R4Q99570 1358 aa13.24□□□□□ -0.29
SPARC-204ENST00000521569 XIRP1Q702N8 1843 aaKnown RBP13.24□□□□□ -0.29
SPARC-204ENST00000521569 ROCK1Q13464 1354 aa13.23□□□□□ -0.29
SPARC-204ENST00000521569 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
SPARC-204ENST00000521569 CFAP65Q6ZU64 1925 aaKnown RBP13.21□□□□□ -0.3
SPARC-204ENST00000521569 JCADQ9P266 1359 aa13.2□□□□□ -0.3
SPARC-204ENST00000521569 POTEAQ6S8J7 498 aa13.2□□□□□ -0.3
SPARC-204ENST00000521569 C19orf44Q9H6X5 657 aa13.19□□□□□ -0.3
SPARC-204ENST00000521569 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
SPARC-204ENST00000521569 FAM50AQ14320 339 aaKnown RBP13.18□□□□□ -0.3
SPARC-204ENST00000521569 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
SPARC-204ENST00000521569 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
SPARC-204ENST00000521569 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
SPARC-204ENST00000521569 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
SPARC-204ENST00000521569 PPP1R15AO75807 674 aaPredicted RBP13.17□□□□□ -0.3
SPARC-204ENST00000521569 RBM33Q96EV2 1170 aaKnown RBP13.16□□□□□ -0.3
SPARC-204ENST00000521569 SENP3Q9H4L4 574 aaPredicted RBP13.16□□□□□ -0.3
SPARC-204ENST00000521569 DIP2AQ14689 1571 aa13.15□□□□□ -0.3
SPARC-204ENST00000521569 BCANQ96GW7 911 aa13.15□□□□□ -0.3
SPARC-204ENST00000521569 UNC13BO14795 1591 aa13.15□□□□□ -0.3
SPARC-204ENST00000521569 DCCP43146 1447 aa13.14□□□□□ -0.31
SPARC-204ENST00000521569 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
SPARC-204ENST00000521569 ATF3P18847 181 aa13.12□□□□□ -0.31
SPARC-204ENST00000521569 NUP155O75694 1391 aa13.11□□□□□ -0.31
SPARC-204ENST00000521569 AHDC1Q5TGY3 1603 aaPredicted RBP13.11□□□□□ -0.31
SPARC-204ENST00000521569 ZNF772Q68DY9 489 aaPredicted RBP13.11□□□□□ -0.31
SPARC-204ENST00000521569 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
SPARC-204ENST00000521569 IQGAP3Q86VI3 1631 aa13.1□□□□□ -0.31
SPARC-204ENST00000521569 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
SPARC-204ENST00000521569 COL16A1Q07092 1604 aaPredicted RBP13.1□□□□□ -0.31
SPARC-204ENST00000521569 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
SPARC-204ENST00000521569 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
SPARC-204ENST00000521569 TRPM2O94759 1503 aa13.08□□□□□ -0.31
SPARC-204ENST00000521569 SETD5Q9C0A6 1442 aa13.07□□□□□ -0.32
SPARC-204ENST00000521569 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
SPARC-204ENST00000521569 E9PCH4 1651 aa13.07□□□□□ -0.32
SPARC-204ENST00000521569 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
SPARC-204ENST00000521569 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
SPARC-204ENST00000521569 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
SPARC-204ENST00000521569 LRP6O75581 1613 aa13.06□□□□□ -0.32
SPARC-204ENST00000521569 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
SPARC-204ENST00000521569 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
SPARC-204ENST00000521569 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
SPARC-204ENST00000521569 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.04□□□□□ -0.32
SPARC-204ENST00000521569 METP08581 1390 aa13.03□□□□□ -0.32
SPARC-204ENST00000521569 MST1RQ04912 1400 aa13.03□□□□□ -0.32
SPARC-204ENST00000521569 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
SPARC-204ENST00000521569 RXRBP28702 533 aa13.02□□□□□ -0.33
SPARC-204ENST00000521569 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPARC-204ENST00000521569 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
SPARC-204ENST00000521569 MYO5BQ9ULV0 1848 aa13.02□□□□□ -0.33
SPARC-204ENST00000521569 ADGRL3Q9HAR2 1447 aa13.01□□□□□ -0.33
SPARC-204ENST00000521569 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
SPARC-204ENST00000521569 NRXN3Q9Y4C0 1643 aa13□□□□□ -0.33
SPARC-204ENST00000521569 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
SPARC-204ENST00000521569 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
SPARC-204ENST00000521569 PTCH1Q13635 1447 aa12.99□□□□□ -0.33
SPARC-204ENST00000521569 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
SPARC-204ENST00000521569 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
SPARC-204ENST00000521569 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
SPARC-204ENST00000521569 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
SPARC-204ENST00000521569 PNPLA6Q8IY17 1366 aa12.96□□□□□ -0.33
SPARC-204ENST00000521569 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.33
SPARC-204ENST00000521569 NEXMIFQ5QGS0 1516 aa12.96□□□□□ -0.33
SPARC-204ENST00000521569 NAIPQ13075 1403 aa12.96□□□□□ -0.34
SPARC-204ENST00000521569 AFF2P51816 1311 aa12.95□□□□□ -0.34
SPARC-204ENST00000521569 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
SPARC-204ENST00000521569 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
SPARC-204ENST00000521569 LAMC1P11047 1609 aa12.94□□□□□ -0.34
SPARC-204ENST00000521569 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
SPARC-204ENST00000521569 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
SPARC-204ENST00000521569 HFM1A2PYH4 1435 aa12.93□□□□□ -0.34
SPARC-204ENST00000521569 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
SPARC-204ENST00000521569 NUTM2BA6NNL0 878 aaPredicted RBP12.92□□□□□ -0.34
SPARC-204ENST00000521569 NUTM2EB1AL46 878 aaPredicted RBP12.92□□□□□ -0.34
SPARC-204ENST00000521569 ITGAEP38570 1179 aa12.92□□□□□ -0.34
SPARC-204ENST00000521569 NUTM2AQ8IVF1 878 aaPredicted RBP12.92□□□□□ -0.34
SPARC-204ENST00000521569 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
SPARC-204ENST00000521569 TRIM52Q96A61 297 aa12.92□□□□□ -0.34
SPARC-204ENST00000521569 ROBO2Q9HCK4 1378 aa12.92□□□□□ -0.34
SPARC-204ENST00000521569 SRCAPQ6ZRS2 3230 aa12.9□□□□□ -0.34
SPARC-204ENST00000521569 NGLY1Q96IV0 654 aa12.9□□□□□ -0.34
SPARC-204ENST00000521569 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
SPARC-204ENST00000521569 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
SPARC-204ENST00000521569 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
SPARC-204ENST00000521569 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
SPARC-204ENST00000521569 RGS12O14924 1447 aa12.88□□□□□ -0.35
SPARC-204ENST00000521569 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
SPARC-204ENST00000521569 TRPC5Q9UL62 973 aaPredicted RBP12.87□□□□□ -0.35
SPARC-204ENST00000521569 TECPR2O15040 1411 aa12.87□□□□□ -0.35
SPARC-204ENST00000521569 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
SPARC-204ENST00000521569 SIRT1Q96EB6 747 aa12.86□□□□□ -0.35
SPARC-204ENST00000521569 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
SPARC-204ENST00000521569 ACIN1Q9UKV3 1341 aaKnown RBP12.86□□□□□ -0.35
SPARC-204ENST00000521569 ABCC11Q96J66 1382 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms