RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 BANK1Q8NDB2 785 aa15.97■□□□□ 0.15
CPEB4-208ENST00000520867 CHMP5Q9NZZ3 219 aa15.96■□□□□ 0.15
CPEB4-208ENST00000520867 FAM177BA6PVY3 158 aa15.96■□□□□ 0.14
CPEB4-208ENST00000520867 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.14
CPEB4-208ENST00000520867 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.14
CPEB4-208ENST00000520867 GABPB1Q06547 395 aaPredicted RBP15.95■□□□□ 0.14
CPEB4-208ENST00000520867 TSPYL1Q9H0U9 437 aa15.95■□□□□ 0.14
CPEB4-208ENST00000520867 CCDC9Q9Y3X0 531 aaKnown RBP15.95■□□□□ 0.14
CPEB4-208ENST00000520867 LMOD3Q0VAK6 560 aa15.95■□□□□ 0.14
CPEB4-208ENST00000520867 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
CPEB4-208ENST00000520867 FEZ2Q9UHY8 353 aaPredicted RBP15.95■□□□□ 0.14
CPEB4-208ENST00000520867 MCCP23508 829 aa15.94■□□□□ 0.14
CPEB4-208ENST00000520867 PDCL2Q8N4E4 241 aa15.94■□□□□ 0.14
CPEB4-208ENST00000520867 PDLIM2Q96JY6 352 aa15.94■□□□□ 0.14
CPEB4-208ENST00000520867 MCM5P33992 734 aa15.93■□□□□ 0.14
CPEB4-208ENST00000520867 IRF6O14896 467 aa15.93■□□□□ 0.14
CPEB4-208ENST00000520867 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
CPEB4-208ENST00000520867 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
CPEB4-208ENST00000520867 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
CPEB4-208ENST00000520867 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
CPEB4-208ENST00000520867 POLR1AO95602 1720 aaPredicted RBP15.9■□□□□ 0.14
CPEB4-208ENST00000520867 PRIMPOLQ96LW4 560 aa15.9■□□□□ 0.14
CPEB4-208ENST00000520867 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
CPEB4-208ENST00000520867 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
CPEB4-208ENST00000520867 CALCOCO1Q9P1Z2 691 aa15.9■□□□□ 0.14
CPEB4-208ENST00000520867 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
CPEB4-208ENST00000520867 PLCD4Q9BRC7 762 aa15.89■□□□□ 0.13
CPEB4-208ENST00000520867 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
CPEB4-208ENST00000520867 TRERF1Q96PN7 1200 aa15.89■□□□□ 0.13
CPEB4-208ENST00000520867 FEZ1Q99689 392 aa15.89■□□□□ 0.13
CPEB4-208ENST00000520867 NOP2P46087 812 aaKnown RBP15.88■□□□□ 0.13
CPEB4-208ENST00000520867 BRPF1P55201 1214 aaPredicted RBP15.88■□□□□ 0.13
CPEB4-208ENST00000520867 OGFRQ9NZT2 677 aa15.88■□□□□ 0.13
CPEB4-208ENST00000520867 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
CPEB4-208ENST00000520867 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
CPEB4-208ENST00000520867 MYCBPQ99417 103 aaPredicted RBP15.87■□□□□ 0.13
CPEB4-208ENST00000520867 CEP83Q9Y592 693 aa15.87■□□□□ 0.13
CPEB4-208ENST00000520867 RBM25P49756 843 aaKnown RBP15.86■□□□□ 0.13
CPEB4-208ENST00000520867 TERF2Q15554 542 aa15.86■□□□□ 0.13
CPEB4-208ENST00000520867 NCAPGQ9BPX3 1015 aa15.86■□□□□ 0.13
CPEB4-208ENST00000520867 CCDC18Q5T9S5 1454 aa15.86■□□□□ 0.13
CPEB4-208ENST00000520867 CEP120Q8N960 986 aa15.86■□□□□ 0.13
CPEB4-208ENST00000520867 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
CPEB4-208ENST00000520867 TAOK2Q9UL54 1235 aa15.85■□□□□ 0.13
CPEB4-208ENST00000520867 SH3BP1Q9Y3L3 701 aa15.85■□□□□ 0.13
CPEB4-208ENST00000520867 SKOR2Q2VWA4 1001 aaPredicted RBP15.85■□□□□ 0.13
CPEB4-208ENST00000520867 ANKRD7Q92527 254 aa15.85■□□□□ 0.13
CPEB4-208ENST00000520867 SMC4Q9NTJ3 1288 aa15.85■□□□□ 0.13
CPEB4-208ENST00000520867 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
CPEB4-208ENST00000520867 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
CPEB4-208ENST00000520867 GTF2A1P52655 376 aaPredicted RBP15.84■□□□□ 0.13
CPEB4-208ENST00000520867 RSPH14Q9UHP6 348 aa15.84■□□□□ 0.13
CPEB4-208ENST00000520867 ZNF592Q92610 1267 aa15.84■□□□□ 0.13
CPEB4-208ENST00000520867 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
CPEB4-208ENST00000520867 IBTKQ9P2D0 1353 aaPredicted RBP15.84■□□□□ 0.13
CPEB4-208ENST00000520867 TNNT3P45378 269 aaPredicted RBP15.83■□□□□ 0.13
CPEB4-208ENST00000520867 NBPF20Q3BBV1 942 aa15.83■□□□□ 0.13
CPEB4-208ENST00000520867 MPNDQ8N594 471 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 STK26Q9P289 416 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 DHX16O60231 1041 aaKnown RBP15.82■□□□□ 0.12
CPEB4-208ENST00000520867 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 MFAP1P55081 439 aaKnown RBP15.82■□□□□ 0.12
CPEB4-208ENST00000520867 SEMA3FQ13275 785 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 TMX1Q9H3N1 280 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 UPF2Q9HAU5 1272 aaKnown RBP15.82■□□□□ 0.12
CPEB4-208ENST00000520867 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
CPEB4-208ENST00000520867 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
CPEB4-208ENST00000520867 SATB1Q01826 763 aa15.81■□□□□ 0.12
CPEB4-208ENST00000520867 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
CPEB4-208ENST00000520867 TNPO1Q92973 898 aaKnown RBP15.81■□□□□ 0.12
CPEB4-208ENST00000520867 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
CPEB4-208ENST00000520867 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
CPEB4-208ENST00000520867 RNF217Q8TC41 542 aa15.8■□□□□ 0.12
CPEB4-208ENST00000520867 DDIT3P35638 169 aa15.8■□□□□ 0.12
CPEB4-208ENST00000520867 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
CPEB4-208ENST00000520867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.79■□□□□ 0.12
CPEB4-208ENST00000520867 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
CPEB4-208ENST00000520867 PRXQ9BXM0 1461 aa15.79■□□□□ 0.12
CPEB4-208ENST00000520867 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
CPEB4-208ENST00000520867 CLSTN1O94985 981 aa15.78■□□□□ 0.12
CPEB4-208ENST00000520867 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
CPEB4-208ENST00000520867 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
CPEB4-208ENST00000520867 ICE2Q659A1 982 aa15.77■□□□□ 0.12
CPEB4-208ENST00000520867 BRD4O60885 1362 aaPredicted RBP15.77■□□□□ 0.11
CPEB4-208ENST00000520867 CFAP44Q96MT7 982 aa15.77■□□□□ 0.11
CPEB4-208ENST00000520867 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
CPEB4-208ENST00000520867 SPATA31E1Q6ZUB1 1445 aa15.76■□□□□ 0.11
CPEB4-208ENST00000520867 GOLIM4O00461 696 aa15.75■□□□□ 0.11
CPEB4-208ENST00000520867 ZNF445P59923 1031 aa15.75■□□□□ 0.11
CPEB4-208ENST00000520867 GBP4Q96PP9 640 aa15.75■□□□□ 0.11
CPEB4-208ENST00000520867 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
CPEB4-208ENST00000520867 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
CPEB4-208ENST00000520867 HNRNPH2P55795 449 aaKnown RBP15.74■□□□□ 0.11
CPEB4-208ENST00000520867 GUCY2CP25092 1073 aa15.74■□□□□ 0.11
CPEB4-208ENST00000520867 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
CPEB4-208ENST00000520867 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
CPEB4-208ENST00000520867 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
CPEB4-208ENST00000520867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
CPEB4-208ENST00000520867 ROCK2O75116 1388 aaKnown RBP15.73■□□□□ 0.11
CPEB4-208ENST00000520867 SGSM3Q96HU1 749 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms