RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
HDAC2-208ENST00000520746 TMUB1Q9BVT8 246 aa10.13□□□□□ -0.79
HDAC2-208ENST00000520746 TMEM134Q9H6X4 195 aa10.13□□□□□ -0.79
HDAC2-208ENST00000520746 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
HDAC2-208ENST00000520746 FAM161AQ3B820 660 aa10.11□□□□□ -0.79
HDAC2-208ENST00000520746 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
HDAC2-208ENST00000520746 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
HDAC2-208ENST00000520746 TLL1O43897 1013 aa10.1□□□□□ -0.79
HDAC2-208ENST00000520746 RCCD1A6NED2 376 aa10.09□□□□□ -0.79
HDAC2-208ENST00000520746 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
HDAC2-208ENST00000520746 EMID1Q96A84 441 aaPredicted RBP10.07□□□□□ -0.8
HDAC2-208ENST00000520746 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
HDAC2-208ENST00000520746 CFHP08603 1231 aa10.06□□□□□ -0.8
HDAC2-208ENST00000520746 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
HDAC2-208ENST00000520746 TRIM67Q6ZTA4 783 aa10.05□□□□□ -0.8
HDAC2-208ENST00000520746 SEMA3EO15041 775 aa10.04□□□□□ -0.8
HDAC2-208ENST00000520746 FCHSD2O94868 740 aa10.04□□□□□ -0.8
HDAC2-208ENST00000520746 SLC10A3P09131 477 aa10.04□□□□□ -0.8
HDAC2-208ENST00000520746 P3H3Q8IVL6 736 aa10.04□□□□□ -0.8
HDAC2-208ENST00000520746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
HDAC2-208ENST00000520746 SLC19A1P41440 591 aa10.03□□□□□ -0.8
HDAC2-208ENST00000520746 S1PR4O95977 384 aa10.02□□□□□ -0.81
HDAC2-208ENST00000520746 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.81
HDAC2-208ENST00000520746 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
HDAC2-208ENST00000520746 PXYLP1Q8TE99 480 aa10.01□□□□□ -0.81
HDAC2-208ENST00000520746 SPRYD7Q5W111 196 aa10□□□□□ -0.81
HDAC2-208ENST00000520746 ADH1BP00325 375 aa9.99□□□□□ -0.81
HDAC2-208ENST00000520746 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
HDAC2-208ENST00000520746 NR1I2O75469 434 aa9.97□□□□□ -0.81
HDAC2-208ENST00000520746 OATP04181 439 aa9.97□□□□□ -0.81
HDAC2-208ENST00000520746 ZNF787Q6DD87 383 aa9.97□□□□□ -0.81
HDAC2-208ENST00000520746 ZNF598Q86UK7 904 aaKnown RBP9.97□□□□□ -0.81
HDAC2-208ENST00000520746 HIC1Q14526 733 aa9.96□□□□□ -0.82
HDAC2-208ENST00000520746 METTL3Q86U44 580 aaKnown RBP9.96□□□□□ -0.82
HDAC2-208ENST00000520746 PRR20EP86478 221 aa9.95□□□□□ -0.82
HDAC2-208ENST00000520746 PRR20CP86479 221 aa9.95□□□□□ -0.82
HDAC2-208ENST00000520746 PRR20DP86480 221 aa9.95□□□□□ -0.82
HDAC2-208ENST00000520746 PRR20BP86481 221 aa9.95□□□□□ -0.82
HDAC2-208ENST00000520746 PRR20AP86496 221 aa9.95□□□□□ -0.82
HDAC2-208ENST00000520746 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
HDAC2-208ENST00000520746 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
HDAC2-208ENST00000520746 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
HDAC2-208ENST00000520746 ZNF697Q5TEC3 545 aa9.94□□□□□ -0.82
HDAC2-208ENST00000520746 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
HDAC2-208ENST00000520746 FECHP22830 423 aa9.93□□□□□ -0.82
HDAC2-208ENST00000520746 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
HDAC2-208ENST00000520746 SCUBE3Q8IX30 993 aa9.93□□□□□ -0.82
HDAC2-208ENST00000520746 PKDCCQ504Y2 493 aa9.92□□□□□ -0.82
HDAC2-208ENST00000520746 GPR37O15354 613 aa9.91□□□□□ -0.82
HDAC2-208ENST00000520746 GDF9O60383 454 aa9.91□□□□□ -0.82
HDAC2-208ENST00000520746 MYT1Q01538 1121 aa9.91□□□□□ -0.82
HDAC2-208ENST00000520746 TNFRSF10AO00220 468 aa9.9□□□□□ -0.82
HDAC2-208ENST00000520746 DGAT1O75907 488 aa9.9□□□□□ -0.82
HDAC2-208ENST00000520746 GNPATO15228 680 aa9.89□□□□□ -0.83
HDAC2-208ENST00000520746 RSPH4AQ5TD94 716 aa9.89□□□□□ -0.83
HDAC2-208ENST00000520746 SPSB2Q99619 263 aa9.89□□□□□ -0.83
HDAC2-208ENST00000520746 ZNF775Q96BV0 537 aaPredicted RBP9.88□□□□□ -0.83
HDAC2-208ENST00000520746 FAM187AA6NFU0 413 aa9.87□□□□□ -0.83
HDAC2-208ENST00000520746 RDH13Q8NBN7 331 aa9.87□□□□□ -0.83
HDAC2-208ENST00000520746 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
HDAC2-208ENST00000520746 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
HDAC2-208ENST00000520746 MORN1Q5T089 497 aa9.86□□□□□ -0.83
HDAC2-208ENST00000520746 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
HDAC2-208ENST00000520746 FUT2Q10981 343 aa9.85□□□□□ -0.83
HDAC2-208ENST00000520746 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
HDAC2-208ENST00000520746 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
HDAC2-208ENST00000520746 PKD2L1Q9P0L9 805 aa9.84□□□□□ -0.83
HDAC2-208ENST00000520746 POTECB2RU33 542 aa9.83□□□□□ -0.84
HDAC2-208ENST00000520746 PHOX2BQ99453 314 aa9.83□□□□□ -0.84
HDAC2-208ENST00000520746 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
HDAC2-208ENST00000520746 FOXC1Q12948 553 aa9.81□□□□□ -0.84
HDAC2-208ENST00000520746 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
HDAC2-208ENST00000520746 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
HDAC2-208ENST00000520746 GCGRP47871 477 aa9.8□□□□□ -0.84
HDAC2-208ENST00000520746 PLCB2Q00722 1185 aa9.8□□□□□ -0.84
HDAC2-208ENST00000520746 LMOD2Q6P5Q4 547 aa9.8□□□□□ -0.84
HDAC2-208ENST00000520746 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
HDAC2-208ENST00000520746 SLC27A5Q9Y2P5 690 aa9.8□□□□□ -0.84
HDAC2-208ENST00000520746 FMNL1O95466 1100 aaPredicted RBP9.79□□□□□ -0.84
HDAC2-208ENST00000520746 RPIAP49247 311 aa9.79□□□□□ -0.84
HDAC2-208ENST00000520746 PRDM9Q9NQV7 894 aa9.79□□□□□ -0.84
HDAC2-208ENST00000520746 SULF1Q8IWU6 871 aa9.78□□□□□ -0.84
HDAC2-208ENST00000520746 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
HDAC2-208ENST00000520746 BRICD5Q6PL45 260 aa9.76□□□□□ -0.85
HDAC2-208ENST00000520746 GPIHBP1Q8IV16 184 aa9.76□□□□□ -0.85
HDAC2-208ENST00000520746 SALL2Q9Y467 1007 aaPredicted RBP9.76□□□□□ -0.85
HDAC2-208ENST00000520746 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
HDAC2-208ENST00000520746 TOR4AQ9NXH8 423 aa9.75□□□□□ -0.85
HDAC2-208ENST00000520746 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
HDAC2-208ENST00000520746 MSS51Q4VC12 460 aa9.73□□□□□ -0.85
HDAC2-208ENST00000520746 CRIPAKQ8N1N5 446 aa9.72□□□□□ -0.85
HDAC2-208ENST00000520746 AVPP01185 164 aa9.71□□□□□ -0.86
HDAC2-208ENST00000520746 DACH1Q9UI36 760 aa9.71□□□□□ -0.86
HDAC2-208ENST00000520746 CYP4X1Q8N118 509 aa9.7□□□□□ -0.86
HDAC2-208ENST00000520746 CD46P15529 392 aa9.69□□□□□ -0.86
HDAC2-208ENST00000520746 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
HDAC2-208ENST00000520746 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
HDAC2-208ENST00000520746 AXIN1O15169 862 aa9.66□□□□□ -0.86
HDAC2-208ENST00000520746 MMP16P51512 607 aa9.66□□□□□ -0.86
HDAC2-208ENST00000520746 MAP2K5Q13163 448 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms