RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 EID1Q9Y6B2 187 aa18.54■□□□□ 0.56
MRPS28-202ENST00000518271 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
MRPS28-202ENST00000518271 KIF1BO60333 1816 aa18.51■□□□□ 0.55
MRPS28-202ENST00000518271 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
MRPS28-202ENST00000518271 PLEKHG1Q9ULL1 1385 aa18.51■□□□□ 0.55
MRPS28-202ENST00000518271 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
MRPS28-202ENST00000518271 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
MRPS28-202ENST00000518271 DIP2AQ14689 1571 aa18.47■□□□□ 0.55
MRPS28-202ENST00000518271 NEXMIFQ5QGS0 1516 aa18.47■□□□□ 0.55
MRPS28-202ENST00000518271 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
MRPS28-202ENST00000518271 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
MRPS28-202ENST00000518271 SETBP1Q9Y6X0 1596 aa18.44■□□□□ 0.54
MRPS28-202ENST00000518271 CHGAP10645 457 aaKnown RBP18.44■□□□□ 0.54
MRPS28-202ENST00000518271 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-202ENST00000518271 SETD1AO15047 1707 aaKnown RBP18.42■□□□□ 0.54
MRPS28-202ENST00000518271 XRN1Q8IZH2 1706 aaKnown RBP18.41■□□□□ 0.54
MRPS28-202ENST00000518271 PPLO60437 1756 aa18.41■□□□□ 0.54
MRPS28-202ENST00000518271 KCNA6P17658 529 aa18.41■□□□□ 0.54
MRPS28-202ENST00000518271 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
MRPS28-202ENST00000518271 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
MRPS28-202ENST00000518271 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
MRPS28-202ENST00000518271 PPP1R15AO75807 674 aaPredicted RBP18.39■□□□□ 0.53
MRPS28-202ENST00000518271 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
MRPS28-202ENST00000518271 IFT172Q9UG01 1749 aa18.38■□□□□ 0.53
MRPS28-202ENST00000518271 TOM1O60784 492 aa18.38■□□□□ 0.53
MRPS28-202ENST00000518271 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
MRPS28-202ENST00000518271 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
MRPS28-202ENST00000518271 PTPRUQ92729 1446 aa18.37■□□□□ 0.53
MRPS28-202ENST00000518271 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
MRPS28-202ENST00000518271 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
MRPS28-202ENST00000518271 PIP4K2BP78356 416 aa18.36■□□□□ 0.53
MRPS28-202ENST00000518271 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
MRPS28-202ENST00000518271 FOXD1Q16676 465 aa18.35■□□□□ 0.53
MRPS28-202ENST00000518271 RBM33Q96EV2 1170 aaKnown RBP18.34■□□□□ 0.53
MRPS28-202ENST00000518271 HSPA1LP34931 641 aa18.33■□□□□ 0.52
MRPS28-202ENST00000518271 BCANQ96GW7 911 aa18.33■□□□□ 0.52
MRPS28-202ENST00000518271 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
MRPS28-202ENST00000518271 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
MRPS28-202ENST00000518271 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
MRPS28-202ENST00000518271 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
MRPS28-202ENST00000518271 SPATA31E1Q6ZUB1 1445 aa18.32■□□□□ 0.52
MRPS28-202ENST00000518271 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
MRPS28-202ENST00000518271 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
MRPS28-202ENST00000518271 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
MRPS28-202ENST00000518271 METP08581 1390 aa18.3■□□□□ 0.52
MRPS28-202ENST00000518271 NALCNQ8IZF0 1738 aa18.27■□□□□ 0.52
MRPS28-202ENST00000518271 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
MRPS28-202ENST00000518271 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
MRPS28-202ENST00000518271 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.52
MRPS28-202ENST00000518271 FAM135BQ49AJ0 1406 aa18.26■□□□□ 0.51
MRPS28-202ENST00000518271 MSH6P52701 1360 aa18.25■□□□□ 0.51
MRPS28-202ENST00000518271 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
MRPS28-202ENST00000518271 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
MRPS28-202ENST00000518271 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
MRPS28-202ENST00000518271 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
MRPS28-202ENST00000518271 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
MRPS28-202ENST00000518271 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
MRPS28-202ENST00000518271 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
MRPS28-202ENST00000518271 PTCH1Q13635 1447 aa18.19■□□□□ 0.5
MRPS28-202ENST00000518271 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
MRPS28-202ENST00000518271 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
MRPS28-202ENST00000518271 DCCP43146 1447 aa18.18■□□□□ 0.5
MRPS28-202ENST00000518271 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
MRPS28-202ENST00000518271 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
MRPS28-202ENST00000518271 PIK3C2GO75747 1445 aa18.17■□□□□ 0.5
MRPS28-202ENST00000518271 ADGRL3Q9HAR2 1447 aa18.17■□□□□ 0.5
MRPS28-202ENST00000518271 NRXN1Q9ULB1 1477 aa18.17■□□□□ 0.5
MRPS28-202ENST00000518271 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
MRPS28-202ENST00000518271 AHDC1Q5TGY3 1603 aaPredicted RBP18.16■□□□□ 0.5
MRPS28-202ENST00000518271 ILDR2Q71H61 639 aa18.15■□□□□ 0.5
MRPS28-202ENST00000518271 SLAIN2Q9P270 581 aa18.15■□□□□ 0.5
MRPS28-202ENST00000518271 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
MRPS28-202ENST00000518271 MYOM2P54296 1465 aa18.14■□□□□ 0.5
MRPS28-202ENST00000518271 NHSL1Q5SYE7 1610 aa18.14■□□□□ 0.49
MRPS28-202ENST00000518271 HRCP23327 699 aa18.14■□□□□ 0.49
MRPS28-202ENST00000518271 RGL3Q3MIN7 710 aa18.14■□□□□ 0.49
MRPS28-202ENST00000518271 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
MRPS28-202ENST00000518271 MST1RQ04912 1400 aa18.14■□□□□ 0.49
MRPS28-202ENST00000518271 LAMC1P11047 1609 aa18.13■□□□□ 0.49
MRPS28-202ENST00000518271 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
MRPS28-202ENST00000518271 TECPR2O15040 1411 aa18.11■□□□□ 0.49
MRPS28-202ENST00000518271 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
MRPS28-202ENST00000518271 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
MRPS28-202ENST00000518271 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
MRPS28-202ENST00000518271 ATF3P18847 181 aa18.08■□□□□ 0.48
MRPS28-202ENST00000518271 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
MRPS28-202ENST00000518271 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
MRPS28-202ENST00000518271 BRINP3Q76B58 766 aa18.05■□□□□ 0.48
MRPS28-202ENST00000518271 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
MRPS28-202ENST00000518271 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
MRPS28-202ENST00000518271 FMN2Q9NZ56 1722 aa18.03■□□□□ 0.48
MRPS28-202ENST00000518271 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
MRPS28-202ENST00000518271 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
MRPS28-202ENST00000518271 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.47
MRPS28-202ENST00000518271 LRP6O75581 1613 aa18.01■□□□□ 0.47
MRPS28-202ENST00000518271 TMEM132EQ6IEE7 984 aa18.01■□□□□ 0.47
MRPS28-202ENST00000518271 C14orf93Q9H972 538 aaKnown RBP18.01■□□□□ 0.47
MRPS28-202ENST00000518271 JCADQ9P266 1359 aa18.01■□□□□ 0.47
MRPS28-202ENST00000518271 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
MRPS28-202ENST00000518271 CFAP70Q5T0N1 1121 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms