RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 TOR4AQ9NXH8 423 aa3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 NXF1Q9UBU9 619 aaKnown RBP3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 TSKSQ9UJT2 592 aa3.38□□□□□ -1.87
RNU6-557P-201ENST00000516842 STK25O00506 426 aa3.37□□□□□ -1.87
RNU6-557P-201ENST00000516842 S1PR4O95977 384 aa3.37□□□□□ -1.87
RNU6-557P-201ENST00000516842 CTC1Q2NKJ3 1217 aa3.37□□□□□ -1.87
RNU6-557P-201ENST00000516842 C6orf132Q5T0Z8 1188 aa3.37□□□□□ -1.87
RNU6-557P-201ENST00000516842 ANKLE1Q8NAG6 615 aa3.37□□□□□ -1.87
RNU6-557P-201ENST00000516842 ADAM23O75077 832 aa3.36□□□□□ -1.87
RNU6-557P-201ENST00000516842 CYP4X1Q8N118 509 aa3.35□□□□□ -1.87
RNU6-557P-201ENST00000516842 Q8N3U1 123 aa3.35□□□□□ -1.87
RNU6-557P-201ENST00000516842 BTBD11A6QL63 1104 aa3.34□□□□□ -1.87
RNU6-557P-201ENST00000516842 H3BM21 787 aa3.34□□□□□ -1.87
RNU6-557P-201ENST00000516842 TYW1BQ6NUM6 668 aa3.34□□□□□ -1.87
RNU6-557P-201ENST00000516842 RBM33Q96EV2 1170 aaKnown RBP3.34□□□□□ -1.87
RNU6-557P-201ENST00000516842 SENP2Q9HC62 589 aa3.34□□□□□ -1.87
RNU6-557P-201ENST00000516842 PPP1R15BQ5SWA1 713 aa3.33□□□□□ -1.88
RNU6-557P-201ENST00000516842 BLOC1S3Q6QNY0 202 aa3.33□□□□□ -1.88
RNU6-557P-201ENST00000516842 PACS2Q86VP3 889 aa3.33□□□□□ -1.88
RNU6-557P-201ENST00000516842 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
RNU6-557P-201ENST00000516842 FAM198AQ9UFP1 575 aa3.33□□□□□ -1.88
RNU6-557P-201ENST00000516842 FBXW7Q969H0 707 aa3.32□□□□□ -1.88
RNU6-557P-201ENST00000516842 PHF14O94880 888 aa3.31□□□□□ -1.88
RNU6-557P-201ENST00000516842 SMPD1P17405 629 aa3.31□□□□□ -1.88
RNU6-557P-201ENST00000516842 MAP3K9P80192 1104 aa3.31□□□□□ -1.88
RNU6-557P-201ENST00000516842 TTC24A2A3L6 582 aaPredicted RBP3.3□□□□□ -1.88
RNU6-557P-201ENST00000516842 IGHA1P01876 353 aa3.3□□□□□ -1.88
RNU6-557P-201ENST00000516842 IRS1P35568 1242 aa3.3□□□□□ -1.88
RNU6-557P-201ENST00000516842 KIFC2Q96AC6 838 aa3.3□□□□□ -1.88
RNU6-557P-201ENST00000516842 ADAMTS8Q9UP79 889 aa3.3□□□□□ -1.88
RNU6-557P-201ENST00000516842 LMOD2Q6P5Q4 547 aa3.29□□□□□ -1.88
RNU6-557P-201ENST00000516842 PCDHB3Q9Y5E6 796 aa3.29□□□□□ -1.88
RNU6-557P-201ENST00000516842 DNMT3AQ9Y6K1 912 aaPredicted RBP3.29□□□□□ -1.88
RNU6-557P-201ENST00000516842 J3QL48 77 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 TSR1Q2NL82 804 aaKnown RBP3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 NPAS3Q8IXF0 933 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 HPS1Q92902 700 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 CRISPLD2Q9H0B8 497 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 EMILIN3Q9NT22 766 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 PNMA3Q9UL41 463 aa3.28□□□□□ -1.88
RNU6-557P-201ENST00000516842 BMP1P13497 986 aa3.27□□□□□ -1.89
RNU6-557P-201ENST00000516842 TATDN2Q93075 761 aa3.27□□□□□ -1.89
RNU6-557P-201ENST00000516842 SWT1Q5T5J6 900 aaKnown RBP3.26□□□□□ -1.89
RNU6-557P-201ENST00000516842 CDCA7LQ96GN5 454 aa3.26□□□□□ -1.89
RNU6-557P-201ENST00000516842 NCKAP5LQ9HCH0 1330 aa3.25□□□□□ -1.89
RNU6-557P-201ENST00000516842 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
RNU6-557P-201ENST00000516842 KRTAP17-1Q9BYP8 105 aa3.25□□□□□ -1.89
RNU6-557P-201ENST00000516842 RNF225M0QZC1 329 aaPredicted RBP3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 ITGB2P05107 769 aa3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 HDGFP51858 240 aaKnown RBP3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 NUDT18Q6ZVK8 323 aa3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 TRIM46Q7Z4K8 759 aa3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 SPOCK3Q9BQ16 436 aa3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 SLC6A16Q9GZN6 736 aa3.24□□□□□ -1.89
RNU6-557P-201ENST00000516842 PRSS12P56730 875 aa3.23□□□□□ -1.89
RNU6-557P-201ENST00000516842 DDX12PQ92771 950 aa3.23□□□□□ -1.89
RNU6-557P-201ENST00000516842 EPAS1Q99814 870 aa3.23□□□□□ -1.89
RNU6-557P-201ENST00000516842 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
RNU6-557P-201ENST00000516842 SOBPA7XYQ1 873 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 MSTNO14793 375 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 CD2BP2O95400 341 aaKnown RBP3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 ADH1BP00325 375 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 FOXK2Q01167 660 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 KRT76Q01546 638 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 SNIP1Q8TAD8 396 aaKnown RBP3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 TAOK2Q9UL54 1235 aa3.22□□□□□ -1.89
RNU6-557P-201ENST00000516842 NBPF26B4DH59 902 aa3.21□□□□□ -1.9
RNU6-557P-201ENST00000516842 K7ELQ4 463 aaPredicted RBP3.21□□□□□ -1.9
RNU6-557P-201ENST00000516842 VSIG8P0DPA2 414 aa3.21□□□□□ -1.9
RNU6-557P-201ENST00000516842 RPIAP49247 311 aa3.21□□□□□ -1.9
RNU6-557P-201ENST00000516842 PLA2G4EQ3MJ16 856 aa3.21□□□□□ -1.9
RNU6-557P-201ENST00000516842 MAP3K7O43318 606 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 PROCP04070 461 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 SLF2Q8IX21 1173 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 WHAMMQ8TF30 809 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 MRGPRX2Q96LB1 330 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 FCF1Q9Y324 198 aaKnown RBP3.2□□□□□ -1.9
RNU6-557P-201ENST00000516842 ZNF385CQ66K41 422 aaPredicted RBP3.19□□□□□ -1.9
RNU6-557P-201ENST00000516842 LARP6Q9BRS8 491 aaKnown RBP3.19□□□□□ -1.9
RNU6-557P-201ENST00000516842 EN1Q05925 392 aaPredicted RBP3.18□□□□□ -1.9
RNU6-557P-201ENST00000516842 ZFP42Q96MM3 310 aa3.18□□□□□ -1.9
RNU6-557P-201ENST00000516842 CNTNAP3BQ96NU0 1288 aa3.18□□□□□ -1.9
RNU6-557P-201ENST00000516842 CNTNAP3Q9BZ76 1288 aa3.18□□□□□ -1.9
RNU6-557P-201ENST00000516842 WNT7AO00755 349 aa3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 FURINP09958 794 aa3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 PRIM1P49642 420 aaKnown RBP3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 NBR1Q14596 966 aa3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 SVOPQ8N4V2 548 aa3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 GPR161Q8N6U8 529 aaKnown RBP3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 NECTIN2Q92692 538 aa3.17□□□□□ -1.9
RNU6-557P-201ENST00000516842 PDE4AP27815 886 aa3.16□□□□□ -1.9
RNU6-557P-201ENST00000516842 KANK3Q6NY19 840 aa3.16□□□□□ -1.9
RNU6-557P-201ENST00000516842 GALNT6Q8NCL4 622 aa3.16□□□□□ -1.9
RNU6-557P-201ENST00000516842 DDX27Q96GQ7 796 aaKnown RBP3.16□□□□□ -1.9
RNU6-557P-201ENST00000516842 PRR14Q9BWN1 585 aa3.16□□□□□ -1.9
RNU6-557P-201ENST00000516842 RGL2O15211 777 aa3.15□□□□□ -1.91
RNU6-557P-201ENST00000516842 ARHGEF15O94989 841 aa3.15□□□□□ -1.91
RNU6-557P-201ENST00000516842 MARSP56192 900 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms