RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 PPP1R12CQ9BZL4 782 aa9.72□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 SIRT1Q96EB6 747 aa9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FAM217BQ9NTX9 383 aaPredicted RBP9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TMEM88BA6NKF7 163 aa9.7□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 KDM4AO75164 1064 aa9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ATG7O95352 703 aa9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ZNF16P17020 682 aaPredicted RBP9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 NEFLP07196 543 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 BCL2L13Q9BXK5 485 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 BRPF3Q9ULD4 1205 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PTGER2P43116 358 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FOXK1P85037 733 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 UBXN4Q92575 508 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DDX12PQ92771 950 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ANKRD62A6NC57 917 aa9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ZC3H6P61129 1189 aaKnown RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DNAJC14Q6Y2X3 702 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 MAP3K13O43283 966 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 SF3A1Q15459 793 aaKnown RBP9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 GIPC2Q8TF65 315 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZC3H4Q9UPT8 1303 aaKnown RBP9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PLPP6Q8IY26 295 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 RIC3Q7Z5B4 369 aa9.61□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 AP1G2O75843 785 aa9.6□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF526Q8TF50 670 aaPredicted RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MARCH6O60337 910 aa9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 VAMP1P23763 118 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 CLCN6P51797 869 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 NAALADL2Q58DX5 795 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 FARP1Q9Y4F1 1045 aaPredicted RBP9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 ALG2Q9H553 416 aa9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PRDM16Q9HAZ2 1276 aa9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 LOC102724159A0A0B4J2E5 919 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 OATP04181 439 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PWP2Q15269 919 aaKnown RBP9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 RIPOR2Q9Y4F9 1068 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 SPTLC1O15269 473 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SOX11P35716 441 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 UCN2Q96RP3 112 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 L3MBTL3Q96JM7 780 aaPredicted RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 TMEM106CQ9BVX2 250 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 RSBN1LQ6PCB5 846 aaPredicted RBP9.49□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 ANKRD33BA6NCL7 494 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 LILRB3O75022 631 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 TMEM164Q5U3C3 297 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 GALR2O43603 387 aaPredicted RBP9.47□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 EVI5O60447 810 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms