RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 FAM198AQ9UFP1 575 aa3.97□□□□□ -1.77
RNU6-1041P-201ENST00000516254 GJA5P36382 358 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 PSEN2P49810 448 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SKIV2LQ15477 1246 aaKnown RBP3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 FAM161AQ3B820 660 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 PROX2Q3B8N5 592 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 MARVELD3Q96A59 401 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 HS3ST6Q96QI5 342 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 REPIN1Q9BWE0 567 aaKnown RBP3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 VPS9D1Q9Y2B5 631 aa3.96□□□□□ -1.78
RNU6-1041P-201ENST00000516254 CD46P15529 392 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 USP46P62068 366 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 TUSC1Q2TAM9 212 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 NUTM1Q86Y26 1132 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SLF2Q8IX21 1173 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 STAC3Q96MF2 364 aa3.95□□□□□ -1.78
RNU6-1041P-201ENST00000516254 LSM11P83369 360 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1041P-201ENST00000516254 FLIIQ13045 1269 aa3.94□□□□□ -1.78
RNU6-1041P-201ENST00000516254 GRIPAP1Q4V328 841 aa3.94□□□□□ -1.78
RNU6-1041P-201ENST00000516254 MRPL50Q8N5N7 158 aaKnown RBP3.94□□□□□ -1.78
RNU6-1041P-201ENST00000516254 PRR14Q9BWN1 585 aa3.94□□□□□ -1.78
RNU6-1041P-201ENST00000516254 DDX11L8A8MPP1 907 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 BHMG1C9JSJ3 638 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SMAPO00193 183 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 DMRTA1Q5VZB9 504 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 POTEEQ6S8J3 1075 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 C14orf37Q86TY3 774 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 RDH13Q8NBN7 331 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 TBC1D2Q9BYX2 928 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 AXIN2Q9Y2T1 843 aa3.93□□□□□ -1.78
RNU6-1041P-201ENST00000516254 GOLGA8CPA6NN73 597 aa3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 KDM4AO75164 1064 aa3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 CLK2P49760 499 aaKnown RBP3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SWT1Q5T5J6 900 aaKnown RBP3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 MYSM1Q5VVJ2 828 aa3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 ADGRD1Q6QNK2 874 aa3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 ATP1B4Q9UN42 357 aaPredicted RBP3.92□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SPTLC1O15269 473 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 GCGRP47871 477 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 KMT5BQ4FZB7 885 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 TMEM259Q4ZIN3 620 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SPIRE2Q8WWL2 714 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 NLRP7Q8WX94 980 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 LRCH3Q96II8 777 aa3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 ZFRQ96KR1 1074 aaKnown RBP3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 SEPT9Q9UHD8 586 aaPredicted RBP3.91□□□□□ -1.78
RNU6-1041P-201ENST00000516254 C3orf80F5H4A9 247 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 APBB1O00213 710 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 HRO43593 1189 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 PRPF38BQ5VTL8 546 aaKnown RBP3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 PPP2R2DQ66LE6 453 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SAMD7Q7Z3H4 446 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 RIC3Q7Z5B4 369 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 BANK1Q8NDB2 785 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ANKK1Q8NFD2 765 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 POLR3EQ9NVU0 708 aa3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1041P-201ENST00000516254 POTEB3A0JP26 581 aa3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SPDYE5A6NIY4 337 aa3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SOCS7O14512 581 aa3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 RSBN1LQ6PCB5 846 aaPredicted RBP3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 POTEBQ6S5H4 581 aa3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ANKRD13DQ6ZTN6 518 aa3.89□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SOWAHBA6NEL2 793 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 HOXA2O43364 376 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SLC10A3P09131 477 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ATP6V1AP38606 617 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 PPP4CP60510 307 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NYAP1Q6ZVC0 841 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ZBTB3Q9H5J0 574 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 PRM3Q9NNZ6 103 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 TIMELESSQ9UNS1 1208 aa3.88□□□□□ -1.79
RNU6-1041P-201ENST00000516254 MOXD2PA6NHM9 499 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 LILRB3O75022 631 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 CFHP08603 1231 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 FDX1P10109 184 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 Q3C1V9 767 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 WNT2BQ93097 391 aa3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 TSR3Q9UJK0 312 aaKnown RBP3.87□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NUTM2BA6NNL0 878 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NUTM2EB1AL46 878 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ACTN4O43707 911 aaKnown RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 RNF40O75150 1001 aa3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 RFC5P40937 340 aa3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NUTM2DQ5VT03 806 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NUTM2AQ8IVF1 878 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 PROCA1Q8NCQ7 364 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 ZMYND15Q9H091 742 aa3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 LIMD1Q9UGP4 676 aa3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 SALL2Q9Y467 1007 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1041P-201ENST00000516254 A6NJR5 290 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 RAD21O60216 631 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NR1I2O75469 434 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 NDUFV2P19404 249 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 FUT2Q10981 343 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 MTMR2Q13614 643 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 WWC1Q8IX03 1113 aa3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 HELBQ8NG08 1087 aaPredicted RBP3.85□□□□□ -1.79
RNU6-1041P-201ENST00000516254 HPS5Q9UPZ3 1129 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms