RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 NYAP1Q6ZVC0 841 aa11.19□□□□□ -0.62
PHF3-211ENST00000514822 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
PHF3-211ENST00000514822 IRF6O14896 467 aa11.18□□□□□ -0.62
PHF3-211ENST00000514822 ZMYND10O75800 440 aa11.18□□□□□ -0.62
PHF3-211ENST00000514822 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
PHF3-211ENST00000514822 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
PHF3-211ENST00000514822 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
PHF3-211ENST00000514822 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
PHF3-211ENST00000514822 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
PHF3-211ENST00000514822 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
PHF3-211ENST00000514822 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
PHF3-211ENST00000514822 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
PHF3-211ENST00000514822 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
PHF3-211ENST00000514822 PRR14Q9BWN1 585 aa11.07□□□□□ -0.64
PHF3-211ENST00000514822 SULF1Q8IWU6 871 aa11.06□□□□□ -0.64
PHF3-211ENST00000514822 PLA2G2EQ9NZK7 142 aa11.06□□□□□ -0.64
PHF3-211ENST00000514822 SLC10A3P09131 477 aa11.05□□□□□ -0.64
PHF3-211ENST00000514822 APLP1P51693 650 aa11.05□□□□□ -0.64
PHF3-211ENST00000514822 MDM2Q00987 491 aaPredicted RBP11.05□□□□□ -0.64
PHF3-211ENST00000514822 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
PHF3-211ENST00000514822 KMT5BQ4FZB7 885 aa11.04□□□□□ -0.64
PHF3-211ENST00000514822 CFHP08603 1231 aa11.03□□□□□ -0.64
PHF3-211ENST00000514822 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
PHF3-211ENST00000514822 AK7Q96M32 723 aa11.03□□□□□ -0.64
PHF3-211ENST00000514822 CLCN1P35523 988 aa11.02□□□□□ -0.65
PHF3-211ENST00000514822 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
PHF3-211ENST00000514822 ITGBL1O95965 494 aaPredicted RBP11.01□□□□□ -0.65
PHF3-211ENST00000514822 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
PHF3-211ENST00000514822 AMHR2Q16671 573 aa11□□□□□ -0.65
PHF3-211ENST00000514822 TRIM66O15016 1216 aa10.98□□□□□ -0.65
PHF3-211ENST00000514822 ACTN4O43707 911 aaKnown RBP10.98□□□□□ -0.65
PHF3-211ENST00000514822 KCNC4Q03721 635 aa10.98□□□□□ -0.65
PHF3-211ENST00000514822 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
PHF3-211ENST00000514822 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
PHF3-211ENST00000514822 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
PHF3-211ENST00000514822 MTRQ99707 1265 aa10.97□□□□□ -0.65
PHF3-211ENST00000514822 CD46P15529 392 aa10.96□□□□□ -0.65
PHF3-211ENST00000514822 TJAP1Q5JTD0 557 aa10.96□□□□□ -0.65
PHF3-211ENST00000514822 TMUB1Q9BVT8 246 aa10.96□□□□□ -0.65
PHF3-211ENST00000514822 IL21Q9HBE4 155 aa10.96□□□□□ -0.65
PHF3-211ENST00000514822 GCGRP47871 477 aa10.95□□□□□ -0.66
PHF3-211ENST00000514822 FAM217BQ9NTX9 383 aaPredicted RBP10.95□□□□□ -0.66
PHF3-211ENST00000514822 COPS2P61201 443 aa10.94□□□□□ -0.66
PHF3-211ENST00000514822 REPIN1Q9BWE0 567 aaKnown RBP10.94□□□□□ -0.66
PHF3-211ENST00000514822 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
PHF3-211ENST00000514822 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
PHF3-211ENST00000514822 PDE4DQ08499 809 aa10.91□□□□□ -0.66
PHF3-211ENST00000514822 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
PHF3-211ENST00000514822 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
PHF3-211ENST00000514822 ZPR1O75312 459 aa10.89□□□□□ -0.67
PHF3-211ENST00000514822 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
PHF3-211ENST00000514822 FUT2Q10981 343 aa10.89□□□□□ -0.67
PHF3-211ENST00000514822 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
PHF3-211ENST00000514822 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
PHF3-211ENST00000514822 NR1I2O75469 434 aa10.88□□□□□ -0.67
PHF3-211ENST00000514822 PUS10Q3MIT2 529 aaKnown RBP10.88□□□□□ -0.67
PHF3-211ENST00000514822 KDM4AO75164 1064 aa10.87□□□□□ -0.67
PHF3-211ENST00000514822 A0A0G2JS52 829 aa10.86□□□□□ -0.67
PHF3-211ENST00000514822 TPRNQ4KMQ1 711 aa10.86□□□□□ -0.67
PHF3-211ENST00000514822 USP46P62068 366 aa10.85□□□□□ -0.67
PHF3-211ENST00000514822 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
PHF3-211ENST00000514822 MORN1Q5T089 497 aa10.84□□□□□ -0.67
PHF3-211ENST00000514822 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
PHF3-211ENST00000514822 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
PHF3-211ENST00000514822 MS4A1P11836 297 aa10.81□□□□□ -0.68
PHF3-211ENST00000514822 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
PHF3-211ENST00000514822 HOXA2O43364 376 aa10.8□□□□□ -0.68
PHF3-211ENST00000514822 TLL1O43897 1013 aa10.8□□□□□ -0.68
PHF3-211ENST00000514822 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
PHF3-211ENST00000514822 ADH1BP00325 375 aa10.79□□□□□ -0.68
PHF3-211ENST00000514822 GGCXP38435 758 aa10.78□□□□□ -0.68
PHF3-211ENST00000514822 DIXDC1Q155Q3 683 aa10.78□□□□□ -0.68
PHF3-211ENST00000514822 SPIRE2Q8WWL2 714 aa10.78□□□□□ -0.68
PHF3-211ENST00000514822 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
PHF3-211ENST00000514822 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
PHF3-211ENST00000514822 SPSB2Q99619 263 aa10.77□□□□□ -0.69
PHF3-211ENST00000514822 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
PHF3-211ENST00000514822 Q3C1V9 767 aa10.76□□□□□ -0.69
PHF3-211ENST00000514822 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.76□□□□□ -0.69
PHF3-211ENST00000514822 HLA-CQ95604 372 aa10.75□□□□□ -0.69
PHF3-211ENST00000514822 THAP11Q96EK4 314 aa10.75□□□□□ -0.69
PHF3-211ENST00000514822 RGS20O76081 388 aa10.74□□□□□ -0.69
PHF3-211ENST00000514822 SLC6A16Q9GZN6 736 aa10.74□□□□□ -0.69
PHF3-211ENST00000514822 BRICD5Q6PL45 260 aa10.73□□□□□ -0.69
PHF3-211ENST00000514822 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
PHF3-211ENST00000514822 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
PHF3-211ENST00000514822 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
PHF3-211ENST00000514822 S1PR4O95977 384 aa10.72□□□□□ -0.69
PHF3-211ENST00000514822 FDX1P10109 184 aa10.72□□□□□ -0.69
PHF3-211ENST00000514822 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
PHF3-211ENST00000514822 RNF19BQ6ZMZ0 732 aa10.72□□□□□ -0.69
PHF3-211ENST00000514822 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.69
PHF3-211ENST00000514822 NDUFV2P19404 249 aa10.7□□□□□ -0.7
PHF3-211ENST00000514822 NEUROD2Q15784 382 aa10.69□□□□□ -0.7
PHF3-211ENST00000514822 MSS51Q4VC12 460 aa10.69□□□□□ -0.7
PHF3-211ENST00000514822 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
PHF3-211ENST00000514822 GJA5P36382 358 aa10.67□□□□□ -0.7
PHF3-211ENST00000514822 RSBN1LQ6PCB5 846 aaPredicted RBP10.67□□□□□ -0.7
PHF3-211ENST00000514822 FAM160A2Q8N612 972 aaPredicted RBP10.67□□□□□ -0.7
PHF3-211ENST00000514822 DDRGK1Q96HY6 314 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms