RNA–Protein interactions for RNA: ENST00000514318.1

RACK1-232, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-232ENST00000514318 FAM135BQ49AJ0 1406 aa25.1■■□□□ 1.61
RACK1-232ENST00000514318 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
RACK1-232ENST00000514318 SLC26A8Q96RN1 970 aa25.09■■□□□ 1.61
RACK1-232ENST00000514318 ROBO1Q9Y6N7 1651 aa25.08■■□□□ 1.61
RACK1-232ENST00000514318 ZFYVE9O95405 1425 aa25.08■■□□□ 1.61
RACK1-232ENST00000514318 CHD2O14647 1828 aaKnown RBP25.07■■□□□ 1.6
RACK1-232ENST00000514318 E9PCH4 1651 aa25.05■■□□□ 1.6
RACK1-232ENST00000514318 IQGAP3Q86VI3 1631 aa25.02■■□□□ 1.6
RACK1-232ENST00000514318 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
RACK1-232ENST00000514318 PLEKHG1Q9ULL1 1385 aa25.02■■□□□ 1.6
RACK1-232ENST00000514318 RIMS2Q9UQ26 1411 aa25.01■■□□□ 1.59
RACK1-232ENST00000514318 RBM33Q96EV2 1170 aaKnown RBP24.99■■□□□ 1.59
RACK1-232ENST00000514318 ROCK1Q13464 1354 aa24.98■■□□□ 1.59
RACK1-232ENST00000514318 RGS17Q9UGC6 210 aaPredicted RBP24.97■■□□□ 1.59
RACK1-232ENST00000514318 BCANQ96GW7 911 aa24.96■■□□□ 1.59
RACK1-232ENST00000514318 MSH6P52701 1360 aa24.95■■□□□ 1.59
RACK1-232ENST00000514318 DIP2AQ14689 1571 aa24.93■■□□□ 1.58
RACK1-232ENST00000514318 PHLPP1O60346 1717 aa24.93■■□□□ 1.58
RACK1-232ENST00000514318 PPP1R15AO75807 674 aaPredicted RBP24.92■■□□□ 1.58
RACK1-232ENST00000514318 HDGFP51858 240 aaKnown RBP24.92■■□□□ 1.58
RACK1-232ENST00000514318 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
RACK1-232ENST00000514318 TBX22Q9Y458 520 aa24.9■■□□□ 1.58
RACK1-232ENST00000514318 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.89■■□□□ 1.58
RACK1-232ENST00000514318 NCOA3Q9Y6Q9 1424 aa24.88■■□□□ 1.57
RACK1-232ENST00000514318 SLAIN2Q9P270 581 aa24.88■■□□□ 1.57
RACK1-232ENST00000514318 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
RACK1-232ENST00000514318 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
RACK1-232ENST00000514318 CHGAP10645 457 aaKnown RBP24.85■■□□□ 1.57
RACK1-232ENST00000514318 SPHKAPQ2M3C7 1700 aa24.85■■□□□ 1.57
RACK1-232ENST00000514318 NUP155O75694 1391 aa24.84■■□□□ 1.57
RACK1-232ENST00000514318 PIK3R4Q99570 1358 aa24.84■■□□□ 1.57
RACK1-232ENST00000514318 TRPM2O94759 1503 aa24.83■■□□□ 1.57
RACK1-232ENST00000514318 NUTM2DQ5VT03 806 aaPredicted RBP24.81■■□□□ 1.56
RACK1-232ENST00000514318 NRXN3Q9Y4C0 1643 aa24.81■■□□□ 1.56
RACK1-232ENST00000514318 POTEAQ6S8J7 498 aa24.8■■□□□ 1.56
RACK1-232ENST00000514318 JCADQ9P266 1359 aa24.8■■□□□ 1.56
RACK1-232ENST00000514318 AHDC1Q5TGY3 1603 aaPredicted RBP24.78■■□□□ 1.56
RACK1-232ENST00000514318 XRN1Q8IZH2 1706 aaKnown RBP24.78■■□□□ 1.56
RACK1-232ENST00000514318 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
RACK1-232ENST00000514318 PTPRUQ92729 1446 aa24.77■■□□□ 1.56
RACK1-232ENST00000514318 ITGAEP38570 1179 aa24.76■■□□□ 1.55
RACK1-232ENST00000514318 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
RACK1-232ENST00000514318 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
RACK1-232ENST00000514318 C19orf44Q9H6X5 657 aa24.74■■□□□ 1.55
RACK1-232ENST00000514318 CADPS2Q86UW7 1296 aa24.73■■□□□ 1.55
RACK1-232ENST00000514318 AMOTL2Q9Y2J4 779 aa24.71■■□□□ 1.55
RACK1-232ENST00000514318 SETD1AO15047 1707 aaKnown RBP24.71■■□□□ 1.55
RACK1-232ENST00000514318 LRP6O75581 1613 aa24.71■■□□□ 1.55
RACK1-232ENST00000514318 ATF3P18847 181 aa24.7■■□□□ 1.54
RACK1-232ENST00000514318 CLTCL1P53675 1640 aa24.7■■□□□ 1.54
RACK1-232ENST00000514318 DCCP43146 1447 aa24.69■■□□□ 1.54
RACK1-232ENST00000514318 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
RACK1-232ENST00000514318 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
RACK1-232ENST00000514318 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
RACK1-232ENST00000514318 KIF1BO60333 1816 aa24.66■■□□□ 1.54
RACK1-232ENST00000514318 NHSL1Q5SYE7 1610 aa24.64■■□□□ 1.54
RACK1-232ENST00000514318 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
RACK1-232ENST00000514318 RRBP1Q9P2E9 1410 aaKnown RBP24.63■■□□□ 1.53
RACK1-232ENST00000514318 BRINP3Q76B58 766 aa24.63■■□□□ 1.53
RACK1-232ENST00000514318 NALCNQ8IZF0 1738 aa24.62■■□□□ 1.53
RACK1-232ENST00000514318 METP08581 1390 aa24.62■■□□□ 1.53
RACK1-232ENST00000514318 MST1RQ04912 1400 aa24.61■■□□□ 1.53
RACK1-232ENST00000514318 ZNF326Q5BKZ1 582 aaKnown RBP24.61■■□□□ 1.53
RACK1-232ENST00000514318 NAIPQ13075 1403 aa24.61■■□□□ 1.53
RACK1-232ENST00000514318 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
RACK1-232ENST00000514318 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
RACK1-232ENST00000514318 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
RACK1-232ENST00000514318 ZNF772Q68DY9 489 aaPredicted RBP24.53■■□□□ 1.52
RACK1-232ENST00000514318 LAMC1P11047 1609 aa24.5■■□□□ 1.51
RACK1-232ENST00000514318 PPLO60437 1756 aa24.5■■□□□ 1.51
RACK1-232ENST00000514318 HFM1A2PYH4 1435 aa24.5■■□□□ 1.51
RACK1-232ENST00000514318 PTCH1Q13635 1447 aa24.5■■□□□ 1.51
RACK1-232ENST00000514318 PRAG1Q86YV5 1406 aa24.48■■□□□ 1.51
RACK1-232ENST00000514318 NUTM2BA6NNL0 878 aaPredicted RBP24.46■■□□□ 1.51
RACK1-232ENST00000514318 NUTM2EB1AL46 878 aaPredicted RBP24.46■■□□□ 1.51
RACK1-232ENST00000514318 NUTM2AQ8IVF1 878 aaPredicted RBP24.46■■□□□ 1.51
RACK1-232ENST00000514318 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
RACK1-232ENST00000514318 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.5
RACK1-232ENST00000514318 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
RACK1-232ENST00000514318 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
RACK1-232ENST00000514318 VGFO15240 615 aaPredicted RBP24.43■■□□□ 1.5
RACK1-232ENST00000514318 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
RACK1-232ENST00000514318 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
RACK1-232ENST00000514318 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
RACK1-232ENST00000514318 AFF2P51816 1311 aa24.41■■□□□ 1.5
RACK1-232ENST00000514318 RPGRIP1LQ68CZ1 1315 aa24.41■■□□□ 1.5
RACK1-232ENST00000514318 RXRBP28702 533 aa24.4■■□□□ 1.5
RACK1-232ENST00000514318 UPF1Q92900 1129 aaKnown RBP eCLIP24.38■■□□□ 1.49
RACK1-232ENST00000514318 SLC4A1APQ9BWU0 796 aaKnown RBP24.38■■□□□ 1.49
RACK1-232ENST00000514318 IFT172Q9UG01 1749 aa24.36■■□□□ 1.49
RACK1-232ENST00000514318 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
RACK1-232ENST00000514318 COL22A1Q8NFW1 1626 aaPredicted RBP24.34■■□□□ 1.49
RACK1-232ENST00000514318 C8orf37Q96NL8 207 aa24.33■■□□□ 1.49
RACK1-232ENST00000514318 SOS2Q07890 1332 aaPredicted RBP24.33■■□□□ 1.48
RACK1-232ENST00000514318 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
RACK1-232ENST00000514318 RGS12O14924 1447 aa24.31■■□□□ 1.48
RACK1-232ENST00000514318 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
RACK1-232ENST00000514318 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
RACK1-232ENST00000514318 FOXD1Q16676 465 aa24.28■■□□□ 1.48
RACK1-232ENST00000514318 QTRT2Q9H974 415 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms