RNA–Protein interactions for RNA: ENST00000513956.5

CCND3-219, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-219ENST00000513956 TMEM131LA2VDJ0 1609 aa27.65■■■□□ 2.02
CCND3-219ENST00000513956 HSPA1LP34931 641 aa27.64■■■□□ 2.02
CCND3-219ENST00000513956 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
CCND3-219ENST00000513956 PPP1R15AO75807 674 aaPredicted RBP27.62■■■□□ 2.01
CCND3-219ENST00000513956 RBM33Q96EV2 1170 aaKnown RBP27.62■■■□□ 2.01
CCND3-219ENST00000513956 RIMS2Q9UQ26 1411 aa27.61■■■□□ 2.01
CCND3-219ENST00000513956 XIRP1Q702N8 1843 aaKnown RBP27.61■■■□□ 2.01
CCND3-219ENST00000513956 ZFYVE9O95405 1425 aa27.58■■■□□ 2.01
CCND3-219ENST00000513956 NAIPQ13075 1403 aa27.57■■■□□ 2
CCND3-219ENST00000513956 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
CCND3-219ENST00000513956 KCNA6P17658 529 aa27.53■■■□□ 2
CCND3-219ENST00000513956 PROSER2Q86WR7 435 aaPredicted RBP27.53■■■□□ 2
CCND3-219ENST00000513956 TRIM52Q96A61 297 aa27.53■■■□□ 2
CCND3-219ENST00000513956 ILDR2Q71H61 639 aa27.52■■■□□ 2
CCND3-219ENST00000513956 TMEM94Q12767 1356 aa27.51■■□□□ 1.99
CCND3-219ENST00000513956 PLEKHG1Q9ULL1 1385 aa27.51■■□□□ 1.99
CCND3-219ENST00000513956 HDGFP51858 240 aaKnown RBP27.51■■□□□ 1.99
CCND3-219ENST00000513956 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
CCND3-219ENST00000513956 ZNF326Q5BKZ1 582 aaKnown RBP27.46■■□□□ 1.99
CCND3-219ENST00000513956 CHD2O14647 1828 aaKnown RBP27.45■■□□□ 1.98
CCND3-219ENST00000513956 NWD1Q149M9 1564 aa27.43■■□□□ 1.98
CCND3-219ENST00000513956 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
CCND3-219ENST00000513956 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
CCND3-219ENST00000513956 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
CCND3-219ENST00000513956 TBX22Q9Y458 520 aa27.4■■□□□ 1.98
CCND3-219ENST00000513956 NKTRP30414 1462 aaKnown RBP27.39■■□□□ 1.98
CCND3-219ENST00000513956 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
CCND3-219ENST00000513956 FOXD1Q16676 465 aa27.36■■□□□ 1.97
CCND3-219ENST00000513956 TRPM2O94759 1503 aa27.36■■□□□ 1.97
CCND3-219ENST00000513956 MED1Q15648 1581 aaPredicted RBP27.35■■□□□ 1.97
CCND3-219ENST00000513956 KIF1BO60333 1816 aa27.34■■□□□ 1.97
CCND3-219ENST00000513956 C14orf37Q86TY3 774 aa27.34■■□□□ 1.97
CCND3-219ENST00000513956 MSH6P52701 1360 aa27.34■■□□□ 1.97
CCND3-219ENST00000513956 DIP2AQ14689 1571 aa27.31■■□□□ 1.96
CCND3-219ENST00000513956 ROBO1Q9Y6N7 1651 aa27.31■■□□□ 1.96
CCND3-219ENST00000513956 NRXN3Q9Y4C0 1643 aa27.3■■□□□ 1.96
CCND3-219ENST00000513956 AMOTL2Q9Y2J4 779 aa27.3■■□□□ 1.96
CCND3-219ENST00000513956 PTPRUQ92729 1446 aa27.29■■□□□ 1.96
CCND3-219ENST00000513956 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
CCND3-219ENST00000513956 FAM135BQ49AJ0 1406 aa27.26■■□□□ 1.95
CCND3-219ENST00000513956 SLAIN2Q9P270 581 aa27.25■■□□□ 1.95
CCND3-219ENST00000513956 SETBP1Q9Y6X0 1596 aa27.24■■□□□ 1.95
CCND3-219ENST00000513956 METP08581 1390 aa27.23■■□□□ 1.95
CCND3-219ENST00000513956 PIK3R4Q99570 1358 aa27.23■■□□□ 1.95
CCND3-219ENST00000513956 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
CCND3-219ENST00000513956 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
CCND3-219ENST00000513956 MPHOSPH9Q99550 1183 aa27.19■■□□□ 1.94
CCND3-219ENST00000513956 SOCS7O14512 581 aa27.18■■□□□ 1.94
CCND3-219ENST00000513956 XRN1Q8IZH2 1706 aaKnown RBP27.17■■□□□ 1.94
CCND3-219ENST00000513956 ATF3P18847 181 aa27.17■■□□□ 1.94
CCND3-219ENST00000513956 PHLPP1O60346 1717 aa27.16■■□□□ 1.94
CCND3-219ENST00000513956 C19orf44Q9H6X5 657 aa27.16■■□□□ 1.94
CCND3-219ENST00000513956 RGL3Q3MIN7 710 aa27.14■■□□□ 1.94
CCND3-219ENST00000513956 NCOA3Q9Y6Q9 1424 aa27.14■■□□□ 1.93
CCND3-219ENST00000513956 PPLO60437 1756 aa27.13■■□□□ 1.93
CCND3-219ENST00000513956 VGFO15240 615 aaPredicted RBP27.13■■□□□ 1.93
CCND3-219ENST00000513956 CADPS2Q86UW7 1296 aa27.12■■□□□ 1.93
CCND3-219ENST00000513956 SETD5Q9C0A6 1442 aa27.11■■□□□ 1.93
CCND3-219ENST00000513956 CCDC144AA2RUR9 1427 aa27.1■■□□□ 1.93
CCND3-219ENST00000513956 RPGRIP1LQ68CZ1 1315 aa27.08■■□□□ 1.93
CCND3-219ENST00000513956 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
CCND3-219ENST00000513956 RAB3GAP2Q9H2M9 1393 aa27.05■■□□□ 1.92
CCND3-219ENST00000513956 ADGRF5Q8IZF2 1346 aa27.04■■□□□ 1.92
CCND3-219ENST00000513956 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
CCND3-219ENST00000513956 COL16A1Q07092 1604 aaPredicted RBP27.02■■□□□ 1.92
CCND3-219ENST00000513956 RGS17Q9UGC6 210 aaPredicted RBP27.02■■□□□ 1.92
CCND3-219ENST00000513956 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
CCND3-219ENST00000513956 ROBO2Q9HCK4 1378 aa27■■□□□ 1.91
CCND3-219ENST00000513956 SPATA31E1Q6ZUB1 1445 aa26.99■■□□□ 1.91
CCND3-219ENST00000513956 ADGRL3Q9HAR2 1447 aa26.99■■□□□ 1.91
CCND3-219ENST00000513956 IFT172Q9UG01 1749 aa26.98■■□□□ 1.91
CCND3-219ENST00000513956 MST1RQ04912 1400 aa26.98■■□□□ 1.91
CCND3-219ENST00000513956 JCADQ9P266 1359 aa26.97■■□□□ 1.91
CCND3-219ENST00000513956 DDX17Q92841 729 aaKnown RBP26.97■■□□□ 1.91
CCND3-219ENST00000513956 DCCP43146 1447 aa26.97■■□□□ 1.91
CCND3-219ENST00000513956 STK26Q9P289 416 aa26.96■■□□□ 1.91
CCND3-219ENST00000513956 AHDC1Q5TGY3 1603 aaPredicted RBP26.95■■□□□ 1.91
CCND3-219ENST00000513956 ASXL1Q8IXJ9 1541 aa26.95■■□□□ 1.9
CCND3-219ENST00000513956 TMEM132EQ6IEE7 984 aa26.93■■□□□ 1.9
CCND3-219ENST00000513956 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
CCND3-219ENST00000513956 ANKRD30BQ9BXX2 1392 aa26.9■■□□□ 1.9
CCND3-219ENST00000513956 POTEAQ6S8J7 498 aa26.89■■□□□ 1.9
CCND3-219ENST00000513956 LRP6O75581 1613 aa26.88■■□□□ 1.89
CCND3-219ENST00000513956 NUTM2BA6NNL0 878 aaPredicted RBP26.88■■□□□ 1.89
CCND3-219ENST00000513956 NUTM2EB1AL46 878 aaPredicted RBP26.88■■□□□ 1.89
CCND3-219ENST00000513956 NUTM2AQ8IVF1 878 aaPredicted RBP26.88■■□□□ 1.89
CCND3-219ENST00000513956 MEX3CQ5U5Q3 659 aaKnown RBP26.87■■□□□ 1.89
CCND3-219ENST00000513956 WAPLQ7Z5K2 1190 aa26.87■■□□□ 1.89
CCND3-219ENST00000513956 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
CCND3-219ENST00000513956 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
CCND3-219ENST00000513956 ORAI2Q96SN7 254 aa26.86■■□□□ 1.89
CCND3-219ENST00000513956 SHPRHQ149N8 1683 aa26.85■■□□□ 1.89
CCND3-219ENST00000513956 C1orf167Q5SNV9 1468 aa26.85■■□□□ 1.89
CCND3-219ENST00000513956 PIK3C2GO75747 1445 aa26.84■■□□□ 1.89
CCND3-219ENST00000513956 NUTM2FA1L443 756 aa26.82■■□□□ 1.88
CCND3-219ENST00000513956 SPATA31A6Q5VVP1 1343 aa26.82■■□□□ 1.88
CCND3-219ENST00000513956 PLEKHH1Q9ULM0 1364 aa26.82■■□□□ 1.88
CCND3-219ENST00000513956 CFAP70Q5T0N1 1121 aa26.81■■□□□ 1.88
CCND3-219ENST00000513956 PRAG1Q86YV5 1406 aa26.8■■□□□ 1.88
CCND3-219ENST00000513956 LRPPRCP42704 1394 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms