RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 ATP6V1DQ9Y5K8 247 aa21.25■□□□□ 0.99
ARHGEF28-212ENST00000513042 USP35Q9P2H5 1018 aa21.25■□□□□ 0.99
ARHGEF28-212ENST00000513042 APAF1O14727 1248 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 TPM1P09493 284 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 SETQ01105 290 aaPredicted RBP21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 TEFQ10587 303 aa21.23■□□□□ 0.99
ARHGEF28-212ENST00000513042 TRIM29Q14134 588 aa21.23■□□□□ 0.99
ARHGEF28-212ENST00000513042 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 ZNF771Q7L3S4 317 aaPredicted RBP21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 IFIT2P09913 472 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 TCEAL9Q9UHQ7 104 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 DHX16O60231 1041 aaKnown RBP21.2■□□□□ 0.98
ARHGEF28-212ENST00000513042 BICD2Q8TD16 824 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 PRKRIP1Q9H875 184 aaPredicted RBP21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 NEXNQ0ZGT2 675 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 USP47Q96K76 1375 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 RIPK4P57078 832 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 CCDC70Q6NSX1 233 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 RUFY2Q8WXA3 655 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 NFXL1Q6ZNB6 911 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 CPLX1O14810 134 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 ZBED9Q6R2W3 1325 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 VPS37CA5D8V6 355 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 KDM4AO75164 1064 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 HOMER1Q86YM7 354 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DDX19BQ9UMR2 479 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 REC8O95072 547 aa21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 VPS37DQ86XT2 251 aa21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 GPS2Q13227 327 aa21.14■□□□□ 0.97
ARHGEF28-212ENST00000513042 SAMD1Q6SPF0 538 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 FAM13BQ9NYF5 915 aa21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 FKBP5Q13451 457 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 CPLX2Q6PUV4 134 aaKnown RBP21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 WIZO95785 1651 aa21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 RSPH4AQ5TD94 716 aa21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 HMOX1P09601 288 aa21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 LRRFIP1Q32MZ4 808 aaKnown RBP21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 FYB1O15117 783 aa21.1■□□□□ 0.97
ARHGEF28-212ENST00000513042 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
ARHGEF28-212ENST00000513042 LNPKQ9C0E8 428 aa21.09■□□□□ 0.97
ARHGEF28-212ENST00000513042 CCDC47Q96A33 483 aaKnown RBP21.09■□□□□ 0.97
ARHGEF28-212ENST00000513042 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 TRDNQ13061 729 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 SASS6Q6UVJ0 657 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 IPO7O95373 1038 aaKnown RBP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 ANKRD20A12PQ8NF67 263 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.96
ARHGEF28-212ENST00000513042 NAP1L1P55209 391 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 ERICH2A1L162 156 aa21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 AIMP1Q12904 312 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 INTS3Q68E01 1043 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 RNF20Q5VTR2 975 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 PSME1Q06323 249 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 HOOK1Q9UJC3 728 aaKnown RBP21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 IFT57Q9NWB7 429 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 MTMR7Q9Y216 660 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 NEUROD6Q96NK8 337 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
ARHGEF28-212ENST00000513042 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
ARHGEF28-212ENST00000513042 ROCK1Q13464 1354 aa21.03■□□□□ 0.96
ARHGEF28-212ENST00000513042 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
ARHGEF28-212ENST00000513042 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
ARHGEF28-212ENST00000513042 WASHC4Q2M389 1173 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 TEX35Q5T0J7 233 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
ARHGEF28-212ENST00000513042 MEX3CQ5U5Q3 659 aaKnown RBP21■□□□□ 0.95
ARHGEF28-212ENST00000513042 PDILTQ8N807 584 aa21■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC73Q6ZRK6 1079 aa20.99■□□□□ 0.95
ARHGEF28-212ENST00000513042 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
ARHGEF28-212ENST00000513042 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
ARHGEF28-212ENST00000513042 TTLL5Q6EMB2 1281 aa20.98■□□□□ 0.95
ARHGEF28-212ENST00000513042 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 ERC2O15083 957 aa20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms