RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 ARHGEF5Q12774 1597 aa15.41■□□□□ 0.06
PRDM16-207ENST00000512462 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
PRDM16-207ENST00000512462 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
PRDM16-207ENST00000512462 ABCC2Q92887 1545 aa15.39■□□□□ 0.05
PRDM16-207ENST00000512462 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
PRDM16-207ENST00000512462 SAMD9LQ8IVG5 1584 aa15.39■□□□□ 0.05
PRDM16-207ENST00000512462 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
PRDM16-207ENST00000512462 PLEKHH2Q8IVE3 1493 aa15.38■□□□□ 0.05
PRDM16-207ENST00000512462 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
PRDM16-207ENST00000512462 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
PRDM16-207ENST00000512462 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
PRDM16-207ENST00000512462 PKNOX2Q96KN3 472 aa15.37■□□□□ 0.05
PRDM16-207ENST00000512462 TTC37Q6PGP7 1564 aa15.36■□□□□ 0.05
PRDM16-207ENST00000512462 ITPRIPQ8IWB1 547 aa15.36■□□□□ 0.05
PRDM16-207ENST00000512462 A0A0G2JS52 829 aa15.36■□□□□ 0.05
PRDM16-207ENST00000512462 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
PRDM16-207ENST00000512462 CENPJQ9HC77 1338 aaPredicted RBP15.36■□□□□ 0.05
PRDM16-207ENST00000512462 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
PRDM16-207ENST00000512462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRDM16-207ENST00000512462 CCDC141Q6ZP82 1450 aa15.35■□□□□ 0.05
PRDM16-207ENST00000512462 PDE4AP27815 886 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 HDGFL2Q7Z4V5 671 aaPredicted RBP15.34■□□□□ 0.05
PRDM16-207ENST00000512462 PANK1Q8TE04 598 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 MTHFSP49914 203 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 ERICH6BQ5W0A0 696 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 KDM5DQ9BY66 1539 aa15.34■□□□□ 0.05
PRDM16-207ENST00000512462 BCAR3O75815 825 aa15.33■□□□□ 0.04
PRDM16-207ENST00000512462 LTV1Q96GA3 475 aaPredicted RBP15.33■□□□□ 0.04
PRDM16-207ENST00000512462 HMOX1P09601 288 aa15.32■□□□□ 0.04
PRDM16-207ENST00000512462 C20orf194Q5TEA3 1177 aa15.32■□□□□ 0.04
PRDM16-207ENST00000512462 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
PRDM16-207ENST00000512462 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
PRDM16-207ENST00000512462 MSH5O43196 834 aa15.31■□□□□ 0.04
PRDM16-207ENST00000512462 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
PRDM16-207ENST00000512462 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-207ENST00000512462 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
PRDM16-207ENST00000512462 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
PRDM16-207ENST00000512462 MYO5CQ9NQX4 1742 aa15.3■□□□□ 0.04
PRDM16-207ENST00000512462 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
PRDM16-207ENST00000512462 UHRF1BP1LA0JNW5 1464 aa15.29■□□□□ 0.04
PRDM16-207ENST00000512462 ZCCHC11Q5TAX3 1644 aaKnown RBP15.29■□□□□ 0.04
PRDM16-207ENST00000512462 IPO9Q96P70 1041 aaKnown RBP15.29■□□□□ 0.04
PRDM16-207ENST00000512462 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-207ENST00000512462 MAST1Q9Y2H9 1570 aa15.28■□□□□ 0.04
PRDM16-207ENST00000512462 FBLN1P23142 703 aa15.28■□□□□ 0.04
PRDM16-207ENST00000512462 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
PRDM16-207ENST00000512462 SPATA31E1Q6ZUB1 1445 aa15.27■□□□□ 0.03
PRDM16-207ENST00000512462 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.03
PRDM16-207ENST00000512462 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.03
PRDM16-207ENST00000512462 DDRGK1Q96HY6 314 aa15.27■□□□□ 0.03
PRDM16-207ENST00000512462 ERBINQ96RT1 1412 aa15.26■□□□□ 0.03
PRDM16-207ENST00000512462 CGNL1Q0VF96 1302 aa15.26■□□□□ 0.03
PRDM16-207ENST00000512462 EVC2Q86UK5 1308 aa15.26■□□□□ 0.03
PRDM16-207ENST00000512462 NUTM2GQ5VZR2 741 aa15.26■□□□□ 0.03
PRDM16-207ENST00000512462 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
PRDM16-207ENST00000512462 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
PRDM16-207ENST00000512462 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
PRDM16-207ENST00000512462 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
PRDM16-207ENST00000512462 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
PRDM16-207ENST00000512462 PLXNC1O60486 1568 aa15.23■□□□□ 0.03
PRDM16-207ENST00000512462 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
PRDM16-207ENST00000512462 PLCH2O75038 1416 aa15.22■□□□□ 0.03
PRDM16-207ENST00000512462 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
PRDM16-207ENST00000512462 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
PRDM16-207ENST00000512462 RIPK4P57078 832 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 SLC4A10Q6U841 1118 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 TXNDC2Q86VQ3 553 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 E9PSI1 815 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 UNC13BO14795 1591 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 BECN1Q14457 450 aa15.21■□□□□ 0.03
PRDM16-207ENST00000512462 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
PRDM16-207ENST00000512462 TRAPPC8Q9Y2L5 1435 aa15.2■□□□□ 0.02
PRDM16-207ENST00000512462 GZF1Q9H116 711 aaPredicted RBP15.2■□□□□ 0.02
PRDM16-207ENST00000512462 UHRF1BP1Q6BDS2 1440 aa15.2■□□□□ 0.02
PRDM16-207ENST00000512462 IL27Q8NEV9 243 aa15.2■□□□□ 0.02
PRDM16-207ENST00000512462 WAPLQ7Z5K2 1190 aa15.19■□□□□ 0.02
PRDM16-207ENST00000512462 CABP1Q9NZU7 370 aa15.19■□□□□ 0.02
PRDM16-207ENST00000512462 ZNF428Q96B54 188 aa15.18■□□□□ 0.02
PRDM16-207ENST00000512462 ABCC1P33527 1531 aa15.18■□□□□ 0.02
PRDM16-207ENST00000512462 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
PRDM16-207ENST00000512462 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
PRDM16-207ENST00000512462 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
PRDM16-207ENST00000512462 DUOX2Q9NRD8 1548 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 RALGAPBQ86X10 1494 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 IDI1Q13907 227 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 TESK2Q96S53 571 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 KDM5CP41229 1560 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
PRDM16-207ENST00000512462 PMFBP1Q8TBY8 1022 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
PRDM16-207ENST00000512462 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
PRDM16-207ENST00000512462 FANCIQ9NVI1 1328 aa15.15■□□□□ 0.02
PRDM16-207ENST00000512462 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
PRDM16-207ENST00000512462 SMG6Q86US8 1419 aaKnown RBP15.15■□□□□ 0.02
PRDM16-207ENST00000512462 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-207ENST00000512462 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
PRDM16-207ENST00000512462 ADGRL1O94910 1474 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms