RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 DNAJB2P25686 324 aa11.01□□□□□ -0.65
PDE4D-220ENST00000512069 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
PDE4D-220ENST00000512069 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
PDE4D-220ENST00000512069 TMEM134Q9H6X4 195 aa10.99□□□□□ -0.65
PDE4D-220ENST00000512069 NYAP1Q6ZVC0 841 aa10.97□□□□□ -0.65
PDE4D-220ENST00000512069 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
PDE4D-220ENST00000512069 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
PDE4D-220ENST00000512069 PHOX2BQ99453 314 aa10.97□□□□□ -0.65
PDE4D-220ENST00000512069 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
PDE4D-220ENST00000512069 APLP1P51693 650 aa10.95□□□□□ -0.66
PDE4D-220ENST00000512069 SLC4A3P48751 1232 aa10.93□□□□□ -0.66
PDE4D-220ENST00000512069 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
PDE4D-220ENST00000512069 SLC10A3P09131 477 aa10.9□□□□□ -0.66
PDE4D-220ENST00000512069 ITGBL1O95965 494 aaPredicted RBP10.89□□□□□ -0.67
PDE4D-220ENST00000512069 AK7Q96M32 723 aa10.89□□□□□ -0.67
PDE4D-220ENST00000512069 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
PDE4D-220ENST00000512069 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
PDE4D-220ENST00000512069 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
PDE4D-220ENST00000512069 KCNC4Q03721 635 aa10.87□□□□□ -0.67
PDE4D-220ENST00000512069 MTRQ99707 1265 aa10.87□□□□□ -0.67
PDE4D-220ENST00000512069 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
PDE4D-220ENST00000512069 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
PDE4D-220ENST00000512069 CFHP08603 1231 aa10.85□□□□□ -0.67
PDE4D-220ENST00000512069 COPS2P61201 443 aa10.85□□□□□ -0.67
PDE4D-220ENST00000512069 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
PDE4D-220ENST00000512069 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
PDE4D-220ENST00000512069 TRIM66O15016 1216 aa10.84□□□□□ -0.67
PDE4D-220ENST00000512069 MDM2Q00987 491 aaPredicted RBP10.83□□□□□ -0.68
PDE4D-220ENST00000512069 RDH13Q8NBN7 331 aa10.83□□□□□ -0.68
PDE4D-220ENST00000512069 AMHR2Q16671 573 aa10.82□□□□□ -0.68
PDE4D-220ENST00000512069 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
PDE4D-220ENST00000512069 IL21Q9HBE4 155 aa10.82□□□□□ -0.68
PDE4D-220ENST00000512069 PCDHB3Q9Y5E6 796 aa10.82□□□□□ -0.68
PDE4D-220ENST00000512069 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
PDE4D-220ENST00000512069 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
PDE4D-220ENST00000512069 RSPH4AQ5TD94 716 aa10.81□□□□□ -0.68
PDE4D-220ENST00000512069 PRR14Q9BWN1 585 aa10.81□□□□□ -0.68
PDE4D-220ENST00000512069 ACTN4O43707 911 aaKnown RBP10.8□□□□□ -0.68
PDE4D-220ENST00000512069 CLCN1P35523 988 aa10.8□□□□□ -0.68
PDE4D-220ENST00000512069 BLOC1S3Q6QNY0 202 aa10.8□□□□□ -0.68
PDE4D-220ENST00000512069 A0A0G2JS52 829 aa10.79□□□□□ -0.68
PDE4D-220ENST00000512069 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
PDE4D-220ENST00000512069 NKX2-3Q8TAU0 364 aa10.79□□□□□ -0.68
PDE4D-220ENST00000512069 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
PDE4D-220ENST00000512069 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
PDE4D-220ENST00000512069 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
PDE4D-220ENST00000512069 ZPR1O75312 459 aa10.75□□□□□ -0.69
PDE4D-220ENST00000512069 GCGRP47871 477 aa10.75□□□□□ -0.69
PDE4D-220ENST00000512069 PDE4DQ08499 809 aa10.75□□□□□ -0.69
PDE4D-220ENST00000512069 FAM217BQ9NTX9 383 aaPredicted RBP10.75□□□□□ -0.69
PDE4D-220ENST00000512069 FUT2Q10981 343 aa10.73□□□□□ -0.69
PDE4D-220ENST00000512069 CD46P15529 392 aa10.72□□□□□ -0.69
PDE4D-220ENST00000512069 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-220ENST00000512069 TTLL12Q14166 644 aaPredicted RBP10.72□□□□□ -0.69
PDE4D-220ENST00000512069 TLL1O43897 1013 aa10.71□□□□□ -0.69
PDE4D-220ENST00000512069 SCUBE3Q8IX30 993 aa10.71□□□□□ -0.69
PDE4D-220ENST00000512069 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
PDE4D-220ENST00000512069 PPP1R18Q6NYC8 613 aa10.7□□□□□ -0.7
PDE4D-220ENST00000512069 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
PDE4D-220ENST00000512069 NR1I2O75469 434 aa10.68□□□□□ -0.7
PDE4D-220ENST00000512069 PRKCSHP14314 528 aaPredicted RBP10.68□□□□□ -0.7
PDE4D-220ENST00000512069 ATP6V1AP38606 617 aa10.68□□□□□ -0.7
PDE4D-220ENST00000512069 MORN1Q5T089 497 aa10.67□□□□□ -0.7
PDE4D-220ENST00000512069 KDM4AO75164 1064 aa10.65□□□□□ -0.7
PDE4D-220ENST00000512069 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
PDE4D-220ENST00000512069 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
PDE4D-220ENST00000512069 MS4A1P11836 297 aa10.63□□□□□ -0.71
PDE4D-220ENST00000512069 HLA-CQ95604 372 aa10.63□□□□□ -0.71
PDE4D-220ENST00000512069 RGS20O76081 388 aa10.62□□□□□ -0.71
PDE4D-220ENST00000512069 SPSB2Q99619 263 aa10.62□□□□□ -0.71
PDE4D-220ENST00000512069 S1PR4O95977 384 aa10.61□□□□□ -0.71
PDE4D-220ENST00000512069 ADH1BP00325 375 aa10.61□□□□□ -0.71
PDE4D-220ENST00000512069 USP46P62068 366 aa10.61□□□□□ -0.71
PDE4D-220ENST00000512069 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
PDE4D-220ENST00000512069 BEGAINQ9BUH8 593 aa10.61□□□□□ -0.71
PDE4D-220ENST00000512069 PPEF1O14829 653 aaPredicted RBP10.6□□□□□ -0.71
PDE4D-220ENST00000512069 GGCXP38435 758 aa10.6□□□□□ -0.71
PDE4D-220ENST00000512069 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
PDE4D-220ENST00000512069 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
PDE4D-220ENST00000512069 NUTM1Q86Y26 1132 aa10.59□□□□□ -0.71
PDE4D-220ENST00000512069 KDM4CQ9H3R0 1056 aa10.59□□□□□ -0.71
PDE4D-220ENST00000512069 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
PDE4D-220ENST00000512069 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
PDE4D-220ENST00000512069 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
PDE4D-220ENST00000512069 SLC6A16Q9GZN6 736 aa10.58□□□□□ -0.72
PDE4D-220ENST00000512069 GPBP1L1Q9HC44 474 aaPredicted RBP10.58□□□□□ -0.72
PDE4D-220ENST00000512069 HOXA2O43364 376 aa10.57□□□□□ -0.72
PDE4D-220ENST00000512069 FMNL1O95466 1100 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-220ENST00000512069 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
PDE4D-220ENST00000512069 BRICD5Q6PL45 260 aa10.57□□□□□ -0.72
PDE4D-220ENST00000512069 FAM160A2Q8N612 972 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-220ENST00000512069 PRKD2Q9BZL6 878 aa10.57□□□□□ -0.72
PDE4D-220ENST00000512069 SALL2Q9Y467 1007 aaPredicted RBP10.55□□□□□ -0.72
PDE4D-220ENST00000512069 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
PDE4D-220ENST00000512069 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
PDE4D-220ENST00000512069 NDUFV2P19404 249 aa10.53□□□□□ -0.72
PDE4D-220ENST00000512069 SYMPKQ92797 1274 aaKnown RBP10.53□□□□□ -0.72
PDE4D-220ENST00000512069 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
PDE4D-220ENST00000512069 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
PDE4D-220ENST00000512069 Q3C1V9 767 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms