RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 JCADQ9P266 1359 aa20.8■□□□□ 0.92
POLR2J3-216ENST00000511773 NOS1P29475 1434 aa20.79■□□□□ 0.92
POLR2J3-216ENST00000511773 ANKRD30AQ9BXX3 1397 aa20.79■□□□□ 0.92
POLR2J3-216ENST00000511773 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
POLR2J3-216ENST00000511773 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.92
POLR2J3-216ENST00000511773 PPP1R15AO75807 674 aaPredicted RBP20.76■□□□□ 0.91
POLR2J3-216ENST00000511773 FGD6Q6ZV73 1430 aa20.76■□□□□ 0.91
POLR2J3-216ENST00000511773 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
POLR2J3-216ENST00000511773 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
POLR2J3-216ENST00000511773 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
POLR2J3-216ENST00000511773 LRP6O75581 1613 aa20.74■□□□□ 0.91
POLR2J3-216ENST00000511773 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
POLR2J3-216ENST00000511773 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
POLR2J3-216ENST00000511773 C14orf37Q86TY3 774 aa20.73■□□□□ 0.91
POLR2J3-216ENST00000511773 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
POLR2J3-216ENST00000511773 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
POLR2J3-216ENST00000511773 APLP2Q06481 763 aa20.71■□□□□ 0.91
POLR2J3-216ENST00000511773 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
POLR2J3-216ENST00000511773 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-216ENST00000511773 TMEM131LA2VDJ0 1609 aa20.68■□□□□ 0.9
POLR2J3-216ENST00000511773 SPATA31A6Q5VVP1 1343 aa20.67■□□□□ 0.9
POLR2J3-216ENST00000511773 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
POLR2J3-216ENST00000511773 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
POLR2J3-216ENST00000511773 NUTM2DQ5VT03 806 aaPredicted RBP20.66■□□□□ 0.9
POLR2J3-216ENST00000511773 ZNF772Q68DY9 489 aaPredicted RBP20.66■□□□□ 0.9
POLR2J3-216ENST00000511773 SHPRHQ149N8 1683 aa20.65■□□□□ 0.9
POLR2J3-216ENST00000511773 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-216ENST00000511773 ADGRL2O95490 1459 aa20.65■□□□□ 0.9
POLR2J3-216ENST00000511773 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-216ENST00000511773 UPF1Q92900 1129 aaKnown RBP eCLIP20.65■□□□□ 0.9
POLR2J3-216ENST00000511773 ANKRD50Q9ULJ7 1429 aa20.63■□□□□ 0.89
POLR2J3-216ENST00000511773 ATF3P18847 181 aa20.63■□□□□ 0.89
POLR2J3-216ENST00000511773 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
POLR2J3-216ENST00000511773 NCOA3Q9Y6Q9 1424 aa20.62■□□□□ 0.89
POLR2J3-216ENST00000511773 CADPS2Q86UW7 1296 aa20.62■□□□□ 0.89
POLR2J3-216ENST00000511773 ADAMTS13Q76LX8 1427 aa20.61■□□□□ 0.89
POLR2J3-216ENST00000511773 NUTM2BA6NNL0 878 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-216ENST00000511773 NUTM2EB1AL46 878 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-216ENST00000511773 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-216ENST00000511773 NUTM2AQ8IVF1 878 aaPredicted RBP20.61■□□□□ 0.89
POLR2J3-216ENST00000511773 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
POLR2J3-216ENST00000511773 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.6■□□□□ 0.89
POLR2J3-216ENST00000511773 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
POLR2J3-216ENST00000511773 RXRBP28702 533 aa20.58■□□□□ 0.89
POLR2J3-216ENST00000511773 E9PCH4 1651 aa20.58■□□□□ 0.88
POLR2J3-216ENST00000511773 UNC13BO14795 1591 aa20.56■□□□□ 0.88
POLR2J3-216ENST00000511773 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
POLR2J3-216ENST00000511773 TRPM2O94759 1503 aa20.56■□□□□ 0.88
POLR2J3-216ENST00000511773 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
POLR2J3-216ENST00000511773 AFF2P51816 1311 aa20.53■□□□□ 0.88
POLR2J3-216ENST00000511773 PTPRUQ92729 1446 aa20.53■□□□□ 0.88
POLR2J3-216ENST00000511773 ASXL1Q8IXJ9 1541 aa20.53■□□□□ 0.88
POLR2J3-216ENST00000511773 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
POLR2J3-216ENST00000511773 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
POLR2J3-216ENST00000511773 DCCP43146 1447 aa20.49■□□□□ 0.87
POLR2J3-216ENST00000511773 NHSL1Q5SYE7 1610 aa20.49■□□□□ 0.87
POLR2J3-216ENST00000511773 XRN1Q8IZH2 1706 aaKnown RBP20.48■□□□□ 0.87
POLR2J3-216ENST00000511773 IQGAP3Q86VI3 1631 aa20.48■□□□□ 0.87
POLR2J3-216ENST00000511773 MST1RQ04912 1400 aa20.47■□□□□ 0.87
POLR2J3-216ENST00000511773 C8orf37Q96NL8 207 aa20.47■□□□□ 0.87
POLR2J3-216ENST00000511773 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
POLR2J3-216ENST00000511773 RGS12O14924 1447 aa20.46■□□□□ 0.87
POLR2J3-216ENST00000511773 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
POLR2J3-216ENST00000511773 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
POLR2J3-216ENST00000511773 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
POLR2J3-216ENST00000511773 LRRC59Q96AG4 307 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-216ENST00000511773 QTRT2Q9H974 415 aaKnown RBP20.42■□□□□ 0.86
POLR2J3-216ENST00000511773 NUP155O75694 1391 aa20.42■□□□□ 0.86
POLR2J3-216ENST00000511773 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
POLR2J3-216ENST00000511773 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
POLR2J3-216ENST00000511773 METP08581 1390 aa20.4■□□□□ 0.86
POLR2J3-216ENST00000511773 NALCNQ8IZF0 1738 aa20.4■□□□□ 0.86
POLR2J3-216ENST00000511773 RBM6P78332 1123 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-216ENST00000511773 ZNF326Q5BKZ1 582 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-216ENST00000511773 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
POLR2J3-216ENST00000511773 ADAMTS2O95450 1211 aa20.38■□□□□ 0.85
POLR2J3-216ENST00000511773 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
POLR2J3-216ENST00000511773 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
POLR2J3-216ENST00000511773 NGLY1Q96IV0 654 aa20.36■□□□□ 0.85
POLR2J3-216ENST00000511773 ITGAEP38570 1179 aa20.35■□□□□ 0.85
POLR2J3-216ENST00000511773 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
POLR2J3-216ENST00000511773 C1orf167Q5SNV9 1468 aa20.31■□□□□ 0.84
POLR2J3-216ENST00000511773 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
POLR2J3-216ENST00000511773 CLTCL1P53675 1640 aa20.29■□□□□ 0.84
POLR2J3-216ENST00000511773 USP21Q9UK80 565 aa20.29■□□□□ 0.84
POLR2J3-216ENST00000511773 LAMC1P11047 1609 aa20.27■□□□□ 0.84
POLR2J3-216ENST00000511773 ORAI2Q96SN7 254 aa20.26■□□□□ 0.83
POLR2J3-216ENST00000511773 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
POLR2J3-216ENST00000511773 EP400Q96L91 3159 aa20.24■□□□□ 0.83
POLR2J3-216ENST00000511773 SOS2Q07890 1332 aaPredicted RBP20.24■□□□□ 0.83
POLR2J3-216ENST00000511773 KIF1BO60333 1816 aa20.23■□□□□ 0.83
POLR2J3-216ENST00000511773 PTCH1Q13635 1447 aa20.23■□□□□ 0.83
POLR2J3-216ENST00000511773 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
POLR2J3-216ENST00000511773 ATRNO75882 1429 aa20.21■□□□□ 0.83
POLR2J3-216ENST00000511773 COL22A1Q8NFW1 1626 aaPredicted RBP20.21■□□□□ 0.83
POLR2J3-216ENST00000511773 ZRANB1Q9UGI0 708 aa20.21■□□□□ 0.83
POLR2J3-216ENST00000511773 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
POLR2J3-216ENST00000511773 FOXD1Q16676 465 aa20.18■□□□□ 0.82
POLR2J3-216ENST00000511773 MYOM2P54296 1465 aa20.17■□□□□ 0.82
POLR2J3-216ENST00000511773 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms