RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 SLF2Q8IX21 1173 aa10.76□□□□□ -0.69
MATR3-217ENST00000511333 NFX1Q12986 1120 aaKnown RBP10.75□□□□□ -0.69
MATR3-217ENST00000511333 INSM1Q01101 510 aaPredicted RBP10.74□□□□□ -0.69
MATR3-217ENST00000511333 LIAT1Q6ZQX7 453 aa10.74□□□□□ -0.69
MATR3-217ENST00000511333 NUDT18Q6ZVK8 323 aa10.74□□□□□ -0.69
MATR3-217ENST00000511333 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
MATR3-217ENST00000511333 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
MATR3-217ENST00000511333 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
MATR3-217ENST00000511333 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
MATR3-217ENST00000511333 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
MATR3-217ENST00000511333 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
MATR3-217ENST00000511333 PCDHB3Q9Y5E6 796 aa10.69□□□□□ -0.7
MATR3-217ENST00000511333 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
MATR3-217ENST00000511333 AVPP01185 164 aa10.68□□□□□ -0.7
MATR3-217ENST00000511333 BLOC1S3Q6QNY0 202 aa10.67□□□□□ -0.7
MATR3-217ENST00000511333 TLL1O43897 1013 aa10.66□□□□□ -0.7
MATR3-217ENST00000511333 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
MATR3-217ENST00000511333 S1PR4O95977 384 aa10.64□□□□□ -0.71
MATR3-217ENST00000511333 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
MATR3-217ENST00000511333 DACH1Q9UI36 760 aa10.64□□□□□ -0.71
MATR3-217ENST00000511333 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
MATR3-217ENST00000511333 CDHR5Q9HBB8 845 aa10.63□□□□□ -0.71
MATR3-217ENST00000511333 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
MATR3-217ENST00000511333 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
MATR3-217ENST00000511333 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
MATR3-217ENST00000511333 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
MATR3-217ENST00000511333 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
MATR3-217ENST00000511333 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
MATR3-217ENST00000511333 EYA1Q99502 592 aa10.59□□□□□ -0.71
MATR3-217ENST00000511333 ADH1BP00325 375 aa10.58□□□□□ -0.72
MATR3-217ENST00000511333 TOR4AQ9NXH8 423 aa10.58□□□□□ -0.72
MATR3-217ENST00000511333 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
MATR3-217ENST00000511333 AXIN1O15169 862 aa10.55□□□□□ -0.72
MATR3-217ENST00000511333 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
MATR3-217ENST00000511333 OSBPP22059 807 aa10.55□□□□□ -0.72
MATR3-217ENST00000511333 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
MATR3-217ENST00000511333 NPDC1Q9NQX5 325 aaPredicted RBP10.54□□□□□ -0.72
MATR3-217ENST00000511333 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
MATR3-217ENST00000511333 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
MATR3-217ENST00000511333 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
MATR3-217ENST00000511333 RPIAP49247 311 aa10.49□□□□□ -0.73
MATR3-217ENST00000511333 FOXC1Q12948 553 aa10.48□□□□□ -0.73
MATR3-217ENST00000511333 KMT5BQ4FZB7 885 aa10.48□□□□□ -0.73
MATR3-217ENST00000511333 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
MATR3-217ENST00000511333 NR1I2O75469 434 aa10.45□□□□□ -0.74
MATR3-217ENST00000511333 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
MATR3-217ENST00000511333 DNAJB2P25686 324 aa10.45□□□□□ -0.74
MATR3-217ENST00000511333 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
MATR3-217ENST00000511333 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
MATR3-217ENST00000511333 SNRPBP14678 240 aaKnown RBP10.43□□□□□ -0.74
MATR3-217ENST00000511333 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
MATR3-217ENST00000511333 CFHP08603 1231 aa10.42□□□□□ -0.74
MATR3-217ENST00000511333 ATP13A2Q9NQ11 1180 aa10.42□□□□□ -0.74
MATR3-217ENST00000511333 SENP2Q9HC62 589 aa10.39□□□□□ -0.75
MATR3-217ENST00000511333 SUZ12Q15022 739 aaKnown RBP10.38□□□□□ -0.75
MATR3-217ENST00000511333 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
MATR3-217ENST00000511333 SCUBE3Q8IX30 993 aa10.36□□□□□ -0.75
MATR3-217ENST00000511333 SLC10A3P09131 477 aa10.35□□□□□ -0.75
MATR3-217ENST00000511333 E2F4Q16254 413 aa10.35□□□□□ -0.75
MATR3-217ENST00000511333 SMPD1P17405 629 aa10.34□□□□□ -0.75
MATR3-217ENST00000511333 ZSCAN1Q8NBB4 408 aa10.34□□□□□ -0.75
MATR3-217ENST00000511333 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
MATR3-217ENST00000511333 SPSB2Q99619 263 aa10.34□□□□□ -0.75
MATR3-217ENST00000511333 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
MATR3-217ENST00000511333 FCF1Q9Y324 198 aaKnown RBP10.32□□□□□ -0.76
MATR3-217ENST00000511333 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
MATR3-217ENST00000511333 TTC24A2A3L6 582 aaPredicted RBP10.29□□□□□ -0.76
MATR3-217ENST00000511333 RCCD1A6NED2 376 aa10.29□□□□□ -0.76
MATR3-217ENST00000511333 WNT7AO00755 349 aa10.29□□□□□ -0.76
MATR3-217ENST00000511333 NPAS3Q8IXF0 933 aa10.29□□□□□ -0.76
MATR3-217ENST00000511333 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
MATR3-217ENST00000511333 GMPRP36959 345 aa10.28□□□□□ -0.76
MATR3-217ENST00000511333 SNIP1Q8TAD8 396 aaKnown RBP10.28□□□□□ -0.76
MATR3-217ENST00000511333 THAP11Q96EK4 314 aa10.27□□□□□ -0.77
MATR3-217ENST00000511333 NXF1Q9UBU9 619 aaKnown RBP10.26□□□□□ -0.77
MATR3-217ENST00000511333 PTGDRQ13258 359 aa10.25□□□□□ -0.77
MATR3-217ENST00000511333 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
MATR3-217ENST00000511333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
MATR3-217ENST00000511333 IRF7Q92985 503 aa10.23□□□□□ -0.77
MATR3-217ENST00000511333 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
MATR3-217ENST00000511333 J3QL48 77 aa10.2□□□□□ -0.78
MATR3-217ENST00000511333 MORN1Q5T089 497 aa10.2□□□□□ -0.78
MATR3-217ENST00000511333 H3BM21 787 aa10.18□□□□□ -0.78
MATR3-217ENST00000511333 HPS1Q92902 700 aa10.18□□□□□ -0.78
MATR3-217ENST00000511333 MRGPRX2Q96LB1 330 aa10.18□□□□□ -0.78
MATR3-217ENST00000511333 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
MATR3-217ENST00000511333 TRIM32Q13049 653 aa10.16□□□□□ -0.78
MATR3-217ENST00000511333 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
MATR3-217ENST00000511333 PRDM9Q9NQV7 894 aa10.16□□□□□ -0.78
MATR3-217ENST00000511333 ZBTB24O43167 697 aaPredicted RBP10.15□□□□□ -0.78
MATR3-217ENST00000511333 GSK3AP49840 483 aa10.15□□□□□ -0.78
MATR3-217ENST00000511333 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
MATR3-217ENST00000511333 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
MATR3-217ENST00000511333 FMNL1O95466 1100 aaPredicted RBP10.14□□□□□ -0.79
MATR3-217ENST00000511333 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
MATR3-217ENST00000511333 FAM161AQ3B820 660 aa10.12□□□□□ -0.79
MATR3-217ENST00000511333 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
MATR3-217ENST00000511333 PXYLP1Q8TE99 480 aa10.12□□□□□ -0.79
MATR3-217ENST00000511333 BRICD5Q6PL45 260 aa10.1□□□□□ -0.79
MATR3-217ENST00000511333 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms