RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 KCNA6P17658 529 aa30.22■■■□□ 2.43
ARHGEF28-208ENST00000509848 RBM33Q96EV2 1170 aaKnown RBP30.22■■■□□ 2.43
ARHGEF28-208ENST00000509848 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
ARHGEF28-208ENST00000509848 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
ARHGEF28-208ENST00000509848 ZFYVE9O95405 1425 aa30.21■■■□□ 2.43
ARHGEF28-208ENST00000509848 NUTM2DQ5VT03 806 aaPredicted RBP30.2■■■□□ 2.43
ARHGEF28-208ENST00000509848 RRBP1Q9P2E9 1410 aaKnown RBP30.2■■■□□ 2.42
ARHGEF28-208ENST00000509848 TMEM131LA2VDJ0 1609 aa30.19■■■□□ 2.42
ARHGEF28-208ENST00000509848 MYO5BQ9ULV0 1848 aa30.17■■■□□ 2.42
ARHGEF28-208ENST00000509848 PROSER2Q86WR7 435 aaPredicted RBP30.17■■■□□ 2.42
ARHGEF28-208ENST00000509848 TMEM94Q12767 1356 aa30.16■■■□□ 2.42
ARHGEF28-208ENST00000509848 HDGFP51858 240 aaKnown RBP30.16■■■□□ 2.42
ARHGEF28-208ENST00000509848 PLEKHG1Q9ULL1 1385 aa30.15■■■□□ 2.42
ARHGEF28-208ENST00000509848 XIRP1Q702N8 1843 aaKnown RBP30.12■■■□□ 2.41
ARHGEF28-208ENST00000509848 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.11■■■□□ 2.41
ARHGEF28-208ENST00000509848 NAIPQ13075 1403 aa30.08■■■□□ 2.41
ARHGEF28-208ENST00000509848 TBX22Q9Y458 520 aa30.05■■■□□ 2.4
ARHGEF28-208ENST00000509848 NWD1Q149M9 1564 aa30.03■■■□□ 2.4
ARHGEF28-208ENST00000509848 NKTRP30414 1462 aaKnown RBP30.02■■■□□ 2.4
ARHGEF28-208ENST00000509848 MED1Q15648 1581 aaPredicted RBP30.02■■■□□ 2.4
ARHGEF28-208ENST00000509848 TRIM52Q96A61 297 aa30.01■■■□□ 2.39
ARHGEF28-208ENST00000509848 ADAMTS13Q76LX8 1427 aa30.01■■■□□ 2.39
ARHGEF28-208ENST00000509848 SOCS7O14512 581 aa30■■■□□ 2.39
ARHGEF28-208ENST00000509848 ZNF326Q5BKZ1 582 aaKnown RBP29.99■■■□□ 2.39
ARHGEF28-208ENST00000509848 FAM135BQ49AJ0 1406 aa29.96■■■□□ 2.39
ARHGEF28-208ENST00000509848 SPHKAPQ2M3C7 1700 aa29.96■■■□□ 2.39
ARHGEF28-208ENST00000509848 MSH6P52701 1360 aa29.96■■■□□ 2.39
ARHGEF28-208ENST00000509848 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
ARHGEF28-208ENST00000509848 HFM1A2PYH4 1435 aa29.94■■■□□ 2.38
ARHGEF28-208ENST00000509848 C14orf37Q86TY3 774 aa29.91■■■□□ 2.38
ARHGEF28-208ENST00000509848 PHF23Q9BUL5 403 aaPredicted RBP29.9■■■□□ 2.38
ARHGEF28-208ENST00000509848 SLAIN2Q9P270 581 aa29.9■■■□□ 2.38
ARHGEF28-208ENST00000509848 AMOTL2Q9Y2J4 779 aa29.89■■■□□ 2.38
ARHGEF28-208ENST00000509848 CLTCL1P53675 1640 aa29.89■■■□□ 2.37
ARHGEF28-208ENST00000509848 SLC4A1APQ9BWU0 796 aaKnown RBP29.88■■■□□ 2.37
ARHGEF28-208ENST00000509848 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
ARHGEF28-208ENST00000509848 PTPRUQ92729 1446 aa29.88■■■□□ 2.37
ARHGEF28-208ENST00000509848 PIK3R4Q99570 1358 aa29.87■■■□□ 2.37
ARHGEF28-208ENST00000509848 ROBO1Q9Y6N7 1651 aa29.86■■■□□ 2.37
ARHGEF28-208ENST00000509848 TRPM2O94759 1503 aa29.86■■■□□ 2.37
ARHGEF28-208ENST00000509848 FOXD1Q16676 465 aa29.82■■■□□ 2.36
ARHGEF28-208ENST00000509848 NRXN3Q9Y4C0 1643 aa29.81■■■□□ 2.36
ARHGEF28-208ENST00000509848 NCOA3Q9Y6Q9 1424 aa29.8■■■□□ 2.36
ARHGEF28-208ENST00000509848 METP08581 1390 aa29.8■■■□□ 2.36
ARHGEF28-208ENST00000509848 SETBP1Q9Y6X0 1596 aa29.79■■■□□ 2.36
ARHGEF28-208ENST00000509848 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
ARHGEF28-208ENST00000509848 NEXMIFQ5QGS0 1516 aa29.78■■■□□ 2.36
ARHGEF28-208ENST00000509848 ATF3P18847 181 aa29.77■■■□□ 2.36
ARHGEF28-208ENST00000509848 CADPS2Q86UW7 1296 aa29.75■■■□□ 2.35
ARHGEF28-208ENST00000509848 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.72■■■□□ 2.35
ARHGEF28-208ENST00000509848 RGS17Q9UGC6 210 aaPredicted RBP29.72■■■□□ 2.35
ARHGEF28-208ENST00000509848 KIF1BO60333 1816 aa29.72■■■□□ 2.35
ARHGEF28-208ENST00000509848 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
ARHGEF28-208ENST00000509848 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
ARHGEF28-208ENST00000509848 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
ARHGEF28-208ENST00000509848 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
ARHGEF28-208ENST00000509848 RPGRIP1LQ68CZ1 1315 aa29.65■■■□□ 2.34
ARHGEF28-208ENST00000509848 BRINP3Q76B58 766 aa29.63■■■□□ 2.33
ARHGEF28-208ENST00000509848 RGL3Q3MIN7 710 aa29.62■■■□□ 2.33
ARHGEF28-208ENST00000509848 JCADQ9P266 1359 aa29.62■■■□□ 2.33
ARHGEF28-208ENST00000509848 COL16A1Q07092 1604 aaPredicted RBP29.59■■■□□ 2.33
ARHGEF28-208ENST00000509848 CCDC144AA2RUR9 1427 aa29.58■■■□□ 2.33
ARHGEF28-208ENST00000509848 DCCP43146 1447 aa29.58■■■□□ 2.33
ARHGEF28-208ENST00000509848 MST1RQ04912 1400 aa29.56■■■□□ 2.32
ARHGEF28-208ENST00000509848 POTEAQ6S8J7 498 aa29.56■■■□□ 2.32
ARHGEF28-208ENST00000509848 SETD5Q9C0A6 1442 aa29.55■■■□□ 2.32
ARHGEF28-208ENST00000509848 ADGRL3Q9HAR2 1447 aa29.55■■■□□ 2.32
ARHGEF28-208ENST00000509848 ROBO2Q9HCK4 1378 aa29.55■■■□□ 2.32
ARHGEF28-208ENST00000509848 ADGRF5Q8IZF2 1346 aa29.55■■■□□ 2.32
ARHGEF28-208ENST00000509848 AHDC1Q5TGY3 1603 aaPredicted RBP29.53■■■□□ 2.32
ARHGEF28-208ENST00000509848 PPLO60437 1756 aa29.52■■■□□ 2.32
ARHGEF28-208ENST00000509848 SETD1AO15047 1707 aaKnown RBP29.51■■■□□ 2.32
ARHGEF28-208ENST00000509848 DDX17Q92841 729 aaKnown RBP29.51■■■□□ 2.31
ARHGEF28-208ENST00000509848 SPATA31E1Q6ZUB1 1445 aa29.51■■■□□ 2.31
ARHGEF28-208ENST00000509848 ASXL1Q8IXJ9 1541 aa29.5■■■□□ 2.31
ARHGEF28-208ENST00000509848 NALCNQ8IZF0 1738 aa29.48■■■□□ 2.31
ARHGEF28-208ENST00000509848 PTCH1Q13635 1447 aa29.48■■■□□ 2.31
ARHGEF28-208ENST00000509848 SPATA31A6Q5VVP1 1343 aa29.46■■■□□ 2.31
ARHGEF28-208ENST00000509848 LRP6O75581 1613 aa29.46■■■□□ 2.31
ARHGEF28-208ENST00000509848 RAB3GAP2Q9H2M9 1393 aa29.46■■■□□ 2.31
ARHGEF28-208ENST00000509848 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
ARHGEF28-208ENST00000509848 STK26Q9P289 416 aa29.45■■■□□ 2.31
ARHGEF28-208ENST00000509848 NUTM2BA6NNL0 878 aaPredicted RBP29.44■■■□□ 2.3
ARHGEF28-208ENST00000509848 NUTM2EB1AL46 878 aaPredicted RBP29.44■■■□□ 2.3
ARHGEF28-208ENST00000509848 NUTM2AQ8IVF1 878 aaPredicted RBP29.44■■■□□ 2.3
ARHGEF28-208ENST00000509848 ANKRD30BQ9BXX2 1392 aa29.42■■■□□ 2.3
ARHGEF28-208ENST00000509848 TMEM132EQ6IEE7 984 aa29.42■■■□□ 2.3
ARHGEF28-208ENST00000509848 C1orf167Q5SNV9 1468 aa29.42■■■□□ 2.3
ARHGEF28-208ENST00000509848 ORAI2Q96SN7 254 aa29.41■■■□□ 2.3
ARHGEF28-208ENST00000509848 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
ARHGEF28-208ENST00000509848 PRAG1Q86YV5 1406 aa29.39■■■□□ 2.3
ARHGEF28-208ENST00000509848 WAPLQ7Z5K2 1190 aa29.38■■■□□ 2.29
ARHGEF28-208ENST00000509848 LRRC59Q96AG4 307 aaKnown RBP29.38■■■□□ 2.29
ARHGEF28-208ENST00000509848 SHPRHQ149N8 1683 aa29.37■■■□□ 2.29
ARHGEF28-208ENST00000509848 NHSL1Q5SYE7 1610 aa29.36■■■□□ 2.29
ARHGEF28-208ENST00000509848 IFT172Q9UG01 1749 aa29.34■■■□□ 2.29
ARHGEF28-208ENST00000509848 PIK3C2GO75747 1445 aa29.34■■■□□ 2.29
ARHGEF28-208ENST00000509848 LRPPRCP42704 1394 aaKnown RBP29.33■■■□□ 2.29
ARHGEF28-208ENST00000509848 PLEKHH1Q9ULM0 1364 aa29.31■■■□□ 2.28
ARHGEF28-208ENST00000509848 NUTM2FA1L443 756 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms