RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 RABGEF1Q9UJ41 708 aa12.58□□□□□ -0.4
GYPB-210ENST00000508841 DNAJB2P25686 324 aa12.57□□□□□ -0.4
GYPB-210ENST00000508841 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
GYPB-210ENST00000508841 A0A0G2JS52 829 aa12.54□□□□□ -0.4
GYPB-210ENST00000508841 RCCD1A6NED2 376 aa12.54□□□□□ -0.4
GYPB-210ENST00000508841 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
GYPB-210ENST00000508841 IL27Q8NEV9 243 aa12.54□□□□□ -0.4
GYPB-210ENST00000508841 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
GYPB-210ENST00000508841 FAM117AQ9C073 453 aa12.53□□□□□ -0.4
GYPB-210ENST00000508841 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
GYPB-210ENST00000508841 GOLGA8CPA6NN73 597 aa12.52□□□□□ -0.41
GYPB-210ENST00000508841 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
GYPB-210ENST00000508841 SULF1Q8IWU6 871 aa12.52□□□□□ -0.41
GYPB-210ENST00000508841 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
GYPB-210ENST00000508841 NBPF3Q9H094 633 aa12.52□□□□□ -0.41
GYPB-210ENST00000508841 MS4A1P11836 297 aa12.5□□□□□ -0.41
GYPB-210ENST00000508841 TMEM134Q9H6X4 195 aa12.5□□□□□ -0.41
GYPB-210ENST00000508841 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
GYPB-210ENST00000508841 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
GYPB-210ENST00000508841 WNT2BQ93097 391 aa12.49□□□□□ -0.41
GYPB-210ENST00000508841 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
GYPB-210ENST00000508841 GOPCQ9HD26 462 aa12.48□□□□□ -0.41
GYPB-210ENST00000508841 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
GYPB-210ENST00000508841 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
GYPB-210ENST00000508841 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
GYPB-210ENST00000508841 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
GYPB-210ENST00000508841 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
GYPB-210ENST00000508841 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.41
GYPB-210ENST00000508841 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.41
GYPB-210ENST00000508841 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
GYPB-210ENST00000508841 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
GYPB-210ENST00000508841 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
GYPB-210ENST00000508841 SMAPO00193 183 aa12.45□□□□□ -0.42
GYPB-210ENST00000508841 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
GYPB-210ENST00000508841 ERICH6Q7L0X2 663 aa12.43□□□□□ -0.42
GYPB-210ENST00000508841 CD46P15529 392 aa12.41□□□□□ -0.42
GYPB-210ENST00000508841 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
GYPB-210ENST00000508841 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
GYPB-210ENST00000508841 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
GYPB-210ENST00000508841 DDX11L8A8MPP1 907 aa12.39□□□□□ -0.43
GYPB-210ENST00000508841 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
GYPB-210ENST00000508841 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
GYPB-210ENST00000508841 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
GYPB-210ENST00000508841 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
GYPB-210ENST00000508841 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
GYPB-210ENST00000508841 Q6ZNB5 142 aa12.34□□□□□ -0.43
GYPB-210ENST00000508841 NUTM1Q86Y26 1132 aa12.34□□□□□ -0.43
GYPB-210ENST00000508841 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
GYPB-210ENST00000508841 SAMD7Q7Z3H4 446 aa12.32□□□□□ -0.44
GYPB-210ENST00000508841 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
GYPB-210ENST00000508841 ITGBL1O95965 494 aaPredicted RBP12.31□□□□□ -0.44
GYPB-210ENST00000508841 USP46P62068 366 aa12.31□□□□□ -0.44
GYPB-210ENST00000508841 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
GYPB-210ENST00000508841 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
GYPB-210ENST00000508841 GJA5P36382 358 aa12.29□□□□□ -0.44
GYPB-210ENST00000508841 GCGRP47871 477 aa12.29□□□□□ -0.44
GYPB-210ENST00000508841 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
GYPB-210ENST00000508841 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
GYPB-210ENST00000508841 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
GYPB-210ENST00000508841 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
GYPB-210ENST00000508841 KDM4AO75164 1064 aa12.27□□□□□ -0.45
GYPB-210ENST00000508841 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.45
GYPB-210ENST00000508841 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
GYPB-210ENST00000508841 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
GYPB-210ENST00000508841 RNF40O75150 1001 aa12.25□□□□□ -0.45
GYPB-210ENST00000508841 SLC10A3P09131 477 aa12.25□□□□□ -0.45
GYPB-210ENST00000508841 KMT5BQ4FZB7 885 aa12.25□□□□□ -0.45
GYPB-210ENST00000508841 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
GYPB-210ENST00000508841 BCAMP50895 628 aa12.24□□□□□ -0.45
GYPB-210ENST00000508841 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
GYPB-210ENST00000508841 POLR3EQ9NVU0 708 aa12.23□□□□□ -0.45
GYPB-210ENST00000508841 SOWAHBA6NEL2 793 aa12.22□□□□□ -0.45
GYPB-210ENST00000508841 SPTLC1O15269 473 aa12.22□□□□□ -0.45
GYPB-210ENST00000508841 CFHP08603 1231 aa12.22□□□□□ -0.45
GYPB-210ENST00000508841 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
GYPB-210ENST00000508841 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.21□□□□□ -0.45
GYPB-210ENST00000508841 HOXA2O43364 376 aa12.19□□□□□ -0.46
GYPB-210ENST00000508841 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
GYPB-210ENST00000508841 MOXD2PA6NHM9 499 aa12.18□□□□□ -0.46
GYPB-210ENST00000508841 PPP4CP60510 307 aa12.18□□□□□ -0.46
GYPB-210ENST00000508841 KCNC4Q03721 635 aa12.18□□□□□ -0.46
GYPB-210ENST00000508841 FLIIQ13045 1269 aa12.18□□□□□ -0.46
GYPB-210ENST00000508841 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
GYPB-210ENST00000508841 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
GYPB-210ENST00000508841 PRPF38BQ5VTL8 546 aaKnown RBP12.16□□□□□ -0.46
GYPB-210ENST00000508841 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
GYPB-210ENST00000508841 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
GYPB-210ENST00000508841 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
GYPB-210ENST00000508841 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
GYPB-210ENST00000508841 ACTN4O43707 911 aaKnown RBP12.15□□□□□ -0.46
GYPB-210ENST00000508841 FDX1P10109 184 aa12.15□□□□□ -0.46
GYPB-210ENST00000508841 PPP2R2DQ66LE6 453 aa12.15□□□□□ -0.46
GYPB-210ENST00000508841 FUT2Q10981 343 aa12.14□□□□□ -0.47
GYPB-210ENST00000508841 LAPTM4AQ15012 233 aa12.14□□□□□ -0.47
GYPB-210ENST00000508841 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
GYPB-210ENST00000508841 NDUFV2P19404 249 aa12.13□□□□□ -0.47
GYPB-210ENST00000508841 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
GYPB-210ENST00000508841 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
GYPB-210ENST00000508841 TIMELESSQ9UNS1 1208 aa12.11□□□□□ -0.47
GYPB-210ENST00000508841 SPDYE5A6NIY4 337 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms