RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 FCHSD2O94868 740 aa7.16□□□□□ -1.26
UBE2D3-226ENST00000508635 PPP4CP60510 307 aa7.16□□□□□ -1.26
UBE2D3-226ENST00000508635 PTGDRQ13258 359 aa7.16□□□□□ -1.26
UBE2D3-226ENST00000508635 GPR37O15354 613 aa7.15□□□□□ -1.26
UBE2D3-226ENST00000508635 PRKCSHP14314 528 aaPredicted RBP7.15□□□□□ -1.26
UBE2D3-226ENST00000508635 SEPT9Q9UHD8 586 aaPredicted RBP7.15□□□□□ -1.26
UBE2D3-226ENST00000508635 TSKSQ9UJT2 592 aa7.15□□□□□ -1.26
UBE2D3-226ENST00000508635 FECHP22830 423 aa7.14□□□□□ -1.27
UBE2D3-226ENST00000508635 TRIM6-TRIM34B2RNG4 842 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 GNPATO15228 680 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 HIC1Q14526 733 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 PADI6Q6TGC4 694 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 CDCA7LQ96GN5 454 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 TMUB1Q9BVT8 246 aa7.13□□□□□ -1.27
UBE2D3-226ENST00000508635 POTECB2RU33 542 aa7.12□□□□□ -1.27
UBE2D3-226ENST00000508635 WIPF1O43516 503 aa7.12□□□□□ -1.27
UBE2D3-226ENST00000508635 WFS1O76024 890 aa7.12□□□□□ -1.27
UBE2D3-226ENST00000508635 PRSS12P56730 875 aa7.12□□□□□ -1.27
UBE2D3-226ENST00000508635 MTRQ99707 1265 aa7.12□□□□□ -1.27
UBE2D3-226ENST00000508635 FAM161AQ3B820 660 aa7.11□□□□□ -1.27
UBE2D3-226ENST00000508635 KRI1Q8N9T8 703 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-226ENST00000508635 ZMYND10O75800 440 aa7.1□□□□□ -1.27
UBE2D3-226ENST00000508635 MYO15BQ96JP2 1530 aa7.1□□□□□ -1.27
UBE2D3-226ENST00000508635 PRR20EP86478 221 aa7.09□□□□□ -1.27
UBE2D3-226ENST00000508635 PRR20CP86479 221 aa7.09□□□□□ -1.27
UBE2D3-226ENST00000508635 PRR20DP86480 221 aa7.09□□□□□ -1.27
UBE2D3-226ENST00000508635 PRR20BP86481 221 aa7.09□□□□□ -1.27
UBE2D3-226ENST00000508635 PRR20AP86496 221 aa7.09□□□□□ -1.27
UBE2D3-226ENST00000508635 SMAPO00193 183 aa7.08□□□□□ -1.28
UBE2D3-226ENST00000508635 BARGINQ6ZT62 677 aa7.08□□□□□ -1.28
UBE2D3-226ENST00000508635 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 PACS2Q86VP3 889 aa7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 TTC13Q8NBP0 860 aa7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 SLC24A3Q9HC58 644 aa7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 RBM27Q9P2N5 1060 aaKnown RBP7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 PNMA3Q9UL41 463 aa7.07□□□□□ -1.28
UBE2D3-226ENST00000508635 FAM181BA6NEQ2 426 aa7.06□□□□□ -1.28
UBE2D3-226ENST00000508635 MAP2K5Q13163 448 aa7.06□□□□□ -1.28
UBE2D3-226ENST00000508635 NUDT18Q6ZVK8 323 aa7.06□□□□□ -1.28
UBE2D3-226ENST00000508635 ZCCHC6Q5VYS8 1495 aaKnown RBP7.05□□□□□ -1.28
UBE2D3-226ENST00000508635 TATDN2Q93075 761 aa7.05□□□□□ -1.28
UBE2D3-226ENST00000508635 ADGRG1Q9Y653 693 aa7.05□□□□□ -1.28
UBE2D3-226ENST00000508635 MINK1Q8N4C8 1332 aaPredicted RBP7.04□□□□□ -1.28
UBE2D3-226ENST00000508635 NBPF26B4DH59 902 aa7.04□□□□□ -1.28
UBE2D3-226ENST00000508635 IRF6O14896 467 aa7.04□□□□□ -1.28
UBE2D3-226ENST00000508635 CCDC102AQ96A19 550 aa7.04□□□□□ -1.28
UBE2D3-226ENST00000508635 SLC19A1P41440 591 aa7.03□□□□□ -1.28
UBE2D3-226ENST00000508635 NLRP7Q8WX94 980 aa7.03□□□□□ -1.28
UBE2D3-226ENST00000508635 NECTIN2Q92692 538 aa7.03□□□□□ -1.28
UBE2D3-226ENST00000508635 DCAF1Q9Y4B6 1507 aa7.02□□□□□ -1.29
UBE2D3-226ENST00000508635 FAM187AA6NFU0 413 aa7.02□□□□□ -1.29
UBE2D3-226ENST00000508635 ZNF598Q86UK7 904 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-226ENST00000508635 RBM46Q8TBY0 533 aaKnown RBP7.02□□□□□ -1.29
UBE2D3-226ENST00000508635 ZNF516Q92618 1163 aa7.02□□□□□ -1.29
UBE2D3-226ENST00000508635 OATP04181 439 aa7.01□□□□□ -1.29
UBE2D3-226ENST00000508635 METTL3Q86U44 580 aaKnown RBP7.01□□□□□ -1.29
UBE2D3-226ENST00000508635 AK7Q96M32 723 aa7.01□□□□□ -1.29
UBE2D3-226ENST00000508635 PHOX2BQ99453 314 aa7.01□□□□□ -1.29
UBE2D3-226ENST00000508635 EYA1Q99502 592 aa7.01□□□□□ -1.29
UBE2D3-226ENST00000508635 NFX1Q12986 1120 aaKnown RBP7□□□□□ -1.29
UBE2D3-226ENST00000508635 SAMD7Q7Z3H4 446 aa7□□□□□ -1.29
UBE2D3-226ENST00000508635 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
UBE2D3-226ENST00000508635 AAASQ9NRG9 546 aa7□□□□□ -1.29
UBE2D3-226ENST00000508635 UNC13AQ9UPW8 1703 aa7□□□□□ -1.29
UBE2D3-226ENST00000508635 RCCD1A6NED2 376 aa6.99□□□□□ -1.29
UBE2D3-226ENST00000508635 SPRYD7Q5W111 196 aa6.99□□□□□ -1.29
UBE2D3-226ENST00000508635 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
UBE2D3-226ENST00000508635 TRIM66O15016 1216 aa6.98□□□□□ -1.29
UBE2D3-226ENST00000508635 DNAJB2P25686 324 aa6.97□□□□□ -1.29
UBE2D3-226ENST00000508635 MDM2Q00987 491 aaPredicted RBP6.97□□□□□ -1.29
UBE2D3-226ENST00000508635 SUZ12Q15022 739 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-226ENST00000508635 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
UBE2D3-226ENST00000508635 NKX2-3Q8TAU0 364 aa6.97□□□□□ -1.29
UBE2D3-226ENST00000508635 HDGFP51858 240 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-226ENST00000508635 SWT1Q5T5J6 900 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-226ENST00000508635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.95□□□□□ -1.3
UBE2D3-226ENST00000508635 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
UBE2D3-226ENST00000508635 RNF40O75150 1001 aa6.95□□□□□ -1.3
UBE2D3-226ENST00000508635 APLP1P51693 650 aa6.95□□□□□ -1.3
UBE2D3-226ENST00000508635 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
UBE2D3-226ENST00000508635 C11orf95C9JLR9 678 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-226ENST00000508635 PDE4DQ08499 809 aa6.94□□□□□ -1.3
UBE2D3-226ENST00000508635 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
UBE2D3-226ENST00000508635 GDF9O60383 454 aa6.93□□□□□ -1.3
UBE2D3-226ENST00000508635 ZNF697Q5TEC3 545 aa6.93□□□□□ -1.3
UBE2D3-226ENST00000508635 REPIN1Q9BWE0 567 aaKnown RBP6.93□□□□□ -1.3
UBE2D3-226ENST00000508635 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
UBE2D3-226ENST00000508635 AMHR2Q16671 573 aa6.92□□□□□ -1.3
UBE2D3-226ENST00000508635 ANKLE1Q8NAG6 615 aa6.92□□□□□ -1.3
UBE2D3-226ENST00000508635 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-226ENST00000508635 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
UBE2D3-226ENST00000508635 DDX11L8A8MPP1 907 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 ZPR1O75312 459 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 CLCN1P35523 988 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 NEUROD2Q15784 382 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 PARP9Q8IXQ6 854 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 DAXXQ9UER7 740 aaPredicted RBP6.91□□□□□ -1.3
UBE2D3-226ENST00000508635 SHROOM4Q9ULL8 1493 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms