RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 ADGRL2O95490 1459 aa28■■■□□ 2.07
CLDND1-217ENST00000508071 RPRD2Q5VT52 1461 aaKnown RBP27.97■■■□□ 2.07
CLDND1-217ENST00000508071 MSH6P52701 1360 aa27.97■■■□□ 2.07
CLDND1-217ENST00000508071 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
CLDND1-217ENST00000508071 MYO5BQ9ULV0 1848 aa27.94■■■□□ 2.06
CLDND1-217ENST00000508071 ANKRD50Q9ULJ7 1429 aa27.93■■■□□ 2.06
CLDND1-217ENST00000508071 PPP1R15AO75807 674 aaPredicted RBP27.92■■■□□ 2.06
CLDND1-217ENST00000508071 HDGFP51858 240 aaKnown RBP27.92■■■□□ 2.06
CLDND1-217ENST00000508071 PLEKHG1Q9ULL1 1385 aa27.91■■■□□ 2.06
CLDND1-217ENST00000508071 POTEAQ6S8J7 498 aa27.91■■■□□ 2.06
CLDND1-217ENST00000508071 ZFYVE9O95405 1425 aa27.91■■■□□ 2.06
CLDND1-217ENST00000508071 GCC2Q8IWJ2 1684 aa27.91■■■□□ 2.06
CLDND1-217ENST00000508071 CHD2O14647 1828 aaKnown RBP27.9■■■□□ 2.06
CLDND1-217ENST00000508071 SLAIN2Q9P270 581 aa27.9■■■□□ 2.06
CLDND1-217ENST00000508071 RIMS2Q9UQ26 1411 aa27.89■■■□□ 2.06
CLDND1-217ENST00000508071 PHLPP1O60346 1717 aa27.89■■■□□ 2.05
CLDND1-217ENST00000508071 TMEM131LA2VDJ0 1609 aa27.86■■■□□ 2.05
CLDND1-217ENST00000508071 CHGAP10645 457 aaKnown RBP27.83■■■□□ 2.05
CLDND1-217ENST00000508071 JCADQ9P266 1359 aa27.83■■■□□ 2.05
CLDND1-217ENST00000508071 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.82■■■□□ 2.04
CLDND1-217ENST00000508071 TBX22Q9Y458 520 aa27.82■■■□□ 2.04
CLDND1-217ENST00000508071 C14orf37Q86TY3 774 aa27.8■■■□□ 2.04
CLDND1-217ENST00000508071 UNC13BO14795 1591 aa27.8■■■□□ 2.04
CLDND1-217ENST00000508071 NCOA3Q9Y6Q9 1424 aa27.79■■■□□ 2.04
CLDND1-217ENST00000508071 E9PCH4 1651 aa27.76■■■□□ 2.03
CLDND1-217ENST00000508071 COL16A1Q07092 1604 aaPredicted RBP27.75■■■□□ 2.03
CLDND1-217ENST00000508071 NUTM2DQ5VT03 806 aaPredicted RBP27.75■■■□□ 2.03
CLDND1-217ENST00000508071 DIP2AQ14689 1571 aa27.74■■■□□ 2.03
CLDND1-217ENST00000508071 ADAMTS13Q76LX8 1427 aa27.73■■■□□ 2.03
CLDND1-217ENST00000508071 CADPS2Q86UW7 1296 aa27.72■■■□□ 2.03
CLDND1-217ENST00000508071 PIK3R4Q99570 1358 aa27.72■■■□□ 2.03
CLDND1-217ENST00000508071 SETD1AO15047 1707 aaKnown RBP27.71■■■□□ 2.03
CLDND1-217ENST00000508071 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.71■■■□□ 2.03
CLDND1-217ENST00000508071 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.03
CLDND1-217ENST00000508071 ATF3P18847 181 aa27.7■■■□□ 2.02
CLDND1-217ENST00000508071 C19orf44Q9H6X5 657 aa27.7■■■□□ 2.02
CLDND1-217ENST00000508071 ROCK1Q13464 1354 aa27.69■■■□□ 2.02
CLDND1-217ENST00000508071 SPATA31A6Q5VVP1 1343 aa27.68■■■□□ 2.02
CLDND1-217ENST00000508071 MEX3CQ5U5Q3 659 aaKnown RBP27.67■■■□□ 2.02
CLDND1-217ENST00000508071 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
CLDND1-217ENST00000508071 TRPM2O94759 1503 aa27.67■■■□□ 2.02
CLDND1-217ENST00000508071 LRP6O75581 1613 aa27.65■■■□□ 2.02
CLDND1-217ENST00000508071 AMOTL2Q9Y2J4 779 aa27.64■■■□□ 2.02
CLDND1-217ENST00000508071 NUP155O75694 1391 aa27.63■■■□□ 2.01
CLDND1-217ENST00000508071 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
CLDND1-217ENST00000508071 ZNF772Q68DY9 489 aaPredicted RBP27.62■■■□□ 2.01
CLDND1-217ENST00000508071 PTPRUQ92729 1446 aa27.59■■■□□ 2.01
CLDND1-217ENST00000508071 BRINP3Q76B58 766 aa27.57■■■□□ 2
CLDND1-217ENST00000508071 ITGAEP38570 1179 aa27.56■■■□□ 2
CLDND1-217ENST00000508071 DCCP43146 1447 aa27.55■■■□□ 2
CLDND1-217ENST00000508071 TRIM52Q96A61 297 aa27.54■■■□□ 2
CLDND1-217ENST00000508071 SPHKAPQ2M3C7 1700 aa27.53■■■□□ 2
CLDND1-217ENST00000508071 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
CLDND1-217ENST00000508071 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
CLDND1-217ENST00000508071 SETBP1Q9Y6X0 1596 aa27.52■■■□□ 2
CLDND1-217ENST00000508071 NUTM2BA6NNL0 878 aaPredicted RBP27.52■■■□□ 2
CLDND1-217ENST00000508071 NUTM2EB1AL46 878 aaPredicted RBP27.52■■■□□ 2
CLDND1-217ENST00000508071 ZNF326Q5BKZ1 582 aaKnown RBP27.52■■■□□ 2
CLDND1-217ENST00000508071 NUTM2AQ8IVF1 878 aaPredicted RBP27.52■■■□□ 2
CLDND1-217ENST00000508071 ASXL1Q8IXJ9 1541 aa27.5■■□□□ 1.99
CLDND1-217ENST00000508071 RXRBP28702 533 aa27.49■■□□□ 1.99
CLDND1-217ENST00000508071 UPF1Q92900 1129 aaKnown RBP eCLIP27.47■■□□□ 1.99
CLDND1-217ENST00000508071 MST1RQ04912 1400 aa27.47■■□□□ 1.99
CLDND1-217ENST00000508071 METP08581 1390 aa27.46■■□□□ 1.99
CLDND1-217ENST00000508071 NHSL1Q5SYE7 1610 aa27.45■■□□□ 1.99
CLDND1-217ENST00000508071 SETD5Q9C0A6 1442 aa27.45■■□□□ 1.98
CLDND1-217ENST00000508071 LRRC59Q96AG4 307 aaKnown RBP27.43■■□□□ 1.98
CLDND1-217ENST00000508071 AFF2P51816 1311 aa27.42■■□□□ 1.98
CLDND1-217ENST00000508071 ADGRL3Q9HAR2 1447 aa27.41■■□□□ 1.98
CLDND1-217ENST00000508071 CDK12Q9NYV4 1490 aaPredicted RBP27.4■■□□□ 1.98
CLDND1-217ENST00000508071 CLTCL1P53675 1640 aa27.38■■□□□ 1.97
CLDND1-217ENST00000508071 NEXMIFQ5QGS0 1516 aa27.37■■□□□ 1.97
CLDND1-217ENST00000508071 PPARGC1BQ86YN6 1023 aaKnown RBP27.37■■□□□ 1.97
CLDND1-217ENST00000508071 NALCNQ8IZF0 1738 aa27.37■■□□□ 1.97
CLDND1-217ENST00000508071 KIF1BO60333 1816 aa27.37■■□□□ 1.97
CLDND1-217ENST00000508071 DDX17Q92841 729 aaKnown RBP27.35■■□□□ 1.97
CLDND1-217ENST00000508071 C8orf37Q96NL8 207 aa27.34■■□□□ 1.97
CLDND1-217ENST00000508071 PNPLA6Q8IY17 1366 aa27.34■■□□□ 1.97
CLDND1-217ENST00000508071 QTRT2Q9H974 415 aaKnown RBP27.3■■□□□ 1.96
CLDND1-217ENST00000508071 C1orf167Q5SNV9 1468 aa27.29■■□□□ 1.96
CLDND1-217ENST00000508071 RBM6P78332 1123 aaKnown RBP27.28■■□□□ 1.96
CLDND1-217ENST00000508071 PTCH1Q13635 1447 aa27.27■■□□□ 1.96
CLDND1-217ENST00000508071 RGS12O14924 1447 aa27.26■■□□□ 1.95
CLDND1-217ENST00000508071 VGFO15240 615 aaPredicted RBP27.26■■□□□ 1.95
CLDND1-217ENST00000508071 ADAMTS2O95450 1211 aa27.25■■□□□ 1.95
CLDND1-217ENST00000508071 NGLY1Q96IV0 654 aa27.25■■□□□ 1.95
CLDND1-217ENST00000508071 LAMC1P11047 1609 aa27.24■■□□□ 1.95
CLDND1-217ENST00000508071 NAIPQ13075 1403 aa27.23■■□□□ 1.95
CLDND1-217ENST00000508071 ROBO2Q9HCK4 1378 aa27.22■■□□□ 1.95
CLDND1-217ENST00000508071 ORAI2Q96SN7 254 aa27.2■■□□□ 1.94
CLDND1-217ENST00000508071 SOS2Q07890 1332 aaPredicted RBP27.19■■□□□ 1.94
CLDND1-217ENST00000508071 RPGRIP1LQ68CZ1 1315 aa27.18■■□□□ 1.94
CLDND1-217ENST00000508071 RRBP1Q9P2E9 1410 aaKnown RBP27.18■■□□□ 1.94
CLDND1-217ENST00000508071 HFM1A2PYH4 1435 aa27.16■■□□□ 1.94
CLDND1-217ENST00000508071 PRAG1Q86YV5 1406 aa27.16■■□□□ 1.94
CLDND1-217ENST00000508071 USP21Q9UK80 565 aa27.15■■□□□ 1.94
CLDND1-217ENST00000508071 PPLO60437 1756 aa27.14■■□□□ 1.94
CLDND1-217ENST00000508071 SLC4A1APQ9BWU0 796 aaKnown RBP27.12■■□□□ 1.93
CLDND1-217ENST00000508071 TRPC5Q9UL62 973 aaPredicted RBP27.12■■□□□ 1.93
CLDND1-217ENST00000508071 ATAD2Q6PL18 1390 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms