RNA–Protein interactions for RNA: ENST00000506978.5

LINC00461-207, long intergenic non-protein coding RNA 461, humanhuman

TSL 5 BASIC

Gene LINC00461, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-207ENST00000506978 PIP4K2BP78356 416 aa21.39■■□□□ 1.01
LINC00461-207ENST00000506978 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
LINC00461-207ENST00000506978 PLEKHG1Q9ULL1 1385 aa21.38■■□□□ 1.01
LINC00461-207ENST00000506978 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
LINC00461-207ENST00000506978 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
LINC00461-207ENST00000506978 NKTRP30414 1462 aaKnown RBP21.36■■□□□ 1.01
LINC00461-207ENST00000506978 KCNA6P17658 529 aa21.35■■□□□ 1.01
LINC00461-207ENST00000506978 HSPA1LP34931 641 aa21.35■■□□□ 1.01
LINC00461-207ENST00000506978 HFM1A2PYH4 1435 aa21.35■■□□□ 1.01
LINC00461-207ENST00000506978 CHD2O14647 1828 aaKnown RBP21.32■■□□□ 1
LINC00461-207ENST00000506978 TMEM94Q12767 1356 aa21.32■■□□□ 1
LINC00461-207ENST00000506978 DIP2AQ14689 1571 aa21.31■■□□□ 1
LINC00461-207ENST00000506978 TRPM2O94759 1503 aa21.3■■□□□ 1
LINC00461-207ENST00000506978 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
LINC00461-207ENST00000506978 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
LINC00461-207ENST00000506978 HDGFP51858 240 aaKnown RBP21.3■■□□□ 1
LINC00461-207ENST00000506978 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.3■■□□□ 1
LINC00461-207ENST00000506978 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
LINC00461-207ENST00000506978 CLTCL1P53675 1640 aa21.29■■□□□ 1
LINC00461-207ENST00000506978 BCANQ96GW7 911 aa21.27■■□□□ 1
LINC00461-207ENST00000506978 MED1Q15648 1581 aaPredicted RBP21.27■□□□□ 0.99
LINC00461-207ENST00000506978 ILDR2Q71H61 639 aa21.25■□□□□ 0.99
LINC00461-207ENST00000506978 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
LINC00461-207ENST00000506978 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
LINC00461-207ENST00000506978 NRXN3Q9Y4C0 1643 aa21.25■□□□□ 0.99
LINC00461-207ENST00000506978 PROSER2Q86WR7 435 aaPredicted RBP21.24■□□□□ 0.99
LINC00461-207ENST00000506978 SETBP1Q9Y6X0 1596 aa21.23■□□□□ 0.99
LINC00461-207ENST00000506978 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
LINC00461-207ENST00000506978 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
LINC00461-207ENST00000506978 FAM135BQ49AJ0 1406 aa21.21■□□□□ 0.99
LINC00461-207ENST00000506978 NEXMIFQ5QGS0 1516 aa21.21■□□□□ 0.99
LINC00461-207ENST00000506978 RBM33Q96EV2 1170 aaKnown RBP21.21■□□□□ 0.99
LINC00461-207ENST00000506978 KIF1BO60333 1816 aa21.2■□□□□ 0.98
LINC00461-207ENST00000506978 ROBO1Q9Y6N7 1651 aa21.19■□□□□ 0.98
LINC00461-207ENST00000506978 MSH6P52701 1360 aa21.18■□□□□ 0.98
LINC00461-207ENST00000506978 NCOA3Q9Y6Q9 1424 aa21.18■□□□□ 0.98
LINC00461-207ENST00000506978 XRN1Q8IZH2 1706 aaKnown RBP21.18■□□□□ 0.98
LINC00461-207ENST00000506978 PTPRUQ92729 1446 aa21.17■□□□□ 0.98
LINC00461-207ENST00000506978 TRIM52Q96A61 297 aa21.15■□□□□ 0.98
LINC00461-207ENST00000506978 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
LINC00461-207ENST00000506978 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
LINC00461-207ENST00000506978 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
LINC00461-207ENST00000506978 AMOTL2Q9Y2J4 779 aa21.09■□□□□ 0.97
LINC00461-207ENST00000506978 SETD1AO15047 1707 aaKnown RBP21.09■□□□□ 0.97
LINC00461-207ENST00000506978 METP08581 1390 aa21.09■□□□□ 0.97
LINC00461-207ENST00000506978 PPLO60437 1756 aa21.08■□□□□ 0.97
LINC00461-207ENST00000506978 SLAIN2Q9P270 581 aa21.08■□□□□ 0.97
LINC00461-207ENST00000506978 SOCS7O14512 581 aa21.07■□□□□ 0.96
LINC00461-207ENST00000506978 PHLPP1O60346 1717 aa21.05■□□□□ 0.96
LINC00461-207ENST00000506978 DCCP43146 1447 aa21.04■□□□□ 0.96
LINC00461-207ENST00000506978 FOXD1Q16676 465 aa21.03■□□□□ 0.96
LINC00461-207ENST00000506978 C14orf37Q86TY3 774 aa21.03■□□□□ 0.96
LINC00461-207ENST00000506978 C19orf44Q9H6X5 657 aa21.03■□□□□ 0.96
LINC00461-207ENST00000506978 COL16A1Q07092 1604 aaPredicted RBP21.03■□□□□ 0.96
LINC00461-207ENST00000506978 RPGRIP1LQ68CZ1 1315 aa21.03■□□□□ 0.96
LINC00461-207ENST00000506978 CADPS2Q86UW7 1296 aa21.01■□□□□ 0.95
LINC00461-207ENST00000506978 CCDC144AA2RUR9 1427 aa21.01■□□□□ 0.95
LINC00461-207ENST00000506978 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
LINC00461-207ENST00000506978 NALCNQ8IZF0 1738 aa21.01■□□□□ 0.95
LINC00461-207ENST00000506978 AHDC1Q5TGY3 1603 aaPredicted RBP21■□□□□ 0.95
LINC00461-207ENST00000506978 VGFO15240 615 aaPredicted RBP21■□□□□ 0.95
LINC00461-207ENST00000506978 MPHOSPH9Q99550 1183 aa21■□□□□ 0.95
LINC00461-207ENST00000506978 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
LINC00461-207ENST00000506978 IFT172Q9UG01 1749 aa21■□□□□ 0.95
LINC00461-207ENST00000506978 PTCH1Q13635 1447 aa20.99■□□□□ 0.95
LINC00461-207ENST00000506978 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
LINC00461-207ENST00000506978 ADGRL3Q9HAR2 1447 aa20.99■□□□□ 0.95
LINC00461-207ENST00000506978 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
LINC00461-207ENST00000506978 ATF3P18847 181 aa20.98■□□□□ 0.95
LINC00461-207ENST00000506978 MST1RQ04912 1400 aa20.96■□□□□ 0.95
LINC00461-207ENST00000506978 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
LINC00461-207ENST00000506978 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
LINC00461-207ENST00000506978 JCADQ9P266 1359 aa20.94■□□□□ 0.94
LINC00461-207ENST00000506978 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
LINC00461-207ENST00000506978 BRINP3Q76B58 766 aa20.92■□□□□ 0.94
LINC00461-207ENST00000506978 RGS17Q9UGC6 210 aaPredicted RBP20.92■□□□□ 0.94
LINC00461-207ENST00000506978 ROBO2Q9HCK4 1378 aa20.92■□□□□ 0.94
LINC00461-207ENST00000506978 NHSL1Q5SYE7 1610 aa20.92■□□□□ 0.94
LINC00461-207ENST00000506978 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
LINC00461-207ENST00000506978 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
LINC00461-207ENST00000506978 ADGRF5Q8IZF2 1346 aa20.9■□□□□ 0.94
LINC00461-207ENST00000506978 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
LINC00461-207ENST00000506978 LRP6O75581 1613 aa20.86■□□□□ 0.93
LINC00461-207ENST00000506978 RGL3Q3MIN7 710 aa20.86■□□□□ 0.93
LINC00461-207ENST00000506978 TECPR2O15040 1411 aa20.86■□□□□ 0.93
LINC00461-207ENST00000506978 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
LINC00461-207ENST00000506978 C1orf167Q5SNV9 1468 aa20.85■□□□□ 0.93
LINC00461-207ENST00000506978 LAMC1P11047 1609 aa20.85■□□□□ 0.93
LINC00461-207ENST00000506978 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
LINC00461-207ENST00000506978 CDC42BPGQ6DT37 1551 aa20.84■□□□□ 0.93
LINC00461-207ENST00000506978 SPATA31A6Q5VVP1 1343 aa20.83■□□□□ 0.93
LINC00461-207ENST00000506978 MYOM2P54296 1465 aa20.83■□□□□ 0.93
LINC00461-207ENST00000506978 LRPPRCP42704 1394 aaKnown RBP20.81■□□□□ 0.92
LINC00461-207ENST00000506978 ABCC11Q96J66 1382 aa20.78■□□□□ 0.92
LINC00461-207ENST00000506978 POTEAQ6S8J7 498 aa20.78■□□□□ 0.92
LINC00461-207ENST00000506978 YTHDC2Q9H6S0 1430 aaKnown RBP20.76■□□□□ 0.91
LINC00461-207ENST00000506978 HRCP23327 699 aa20.75■□□□□ 0.91
LINC00461-207ENST00000506978 DDX17Q92841 729 aaKnown RBP20.75■□□□□ 0.91
LINC00461-207ENST00000506978 PNPLA6Q8IY17 1366 aa20.73■□□□□ 0.91
LINC00461-207ENST00000506978 TMEM132EQ6IEE7 984 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms