RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 MYO5BQ9ULV0 1848 aa22.35■■□□□ 1.17
SEC24D-208ENST00000506622 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
SEC24D-208ENST00000506622 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
SEC24D-208ENST00000506622 UNC13BO14795 1591 aa22.33■■□□□ 1.16
SEC24D-208ENST00000506622 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
SEC24D-208ENST00000506622 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
SEC24D-208ENST00000506622 FAM135BQ49AJ0 1406 aa22.31■■□□□ 1.16
SEC24D-208ENST00000506622 ITGAEP38570 1179 aa22.31■■□□□ 1.16
SEC24D-208ENST00000506622 RIMS2Q9UQ26 1411 aa22.3■■□□□ 1.16
SEC24D-208ENST00000506622 NKTRP30414 1462 aaKnown RBP22.29■■□□□ 1.16
SEC24D-208ENST00000506622 ZFYVE9O95405 1425 aa22.29■■□□□ 1.16
SEC24D-208ENST00000506622 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
SEC24D-208ENST00000506622 TMEM131LA2VDJ0 1609 aa22.29■■□□□ 1.16
SEC24D-208ENST00000506622 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
SEC24D-208ENST00000506622 E9PCH4 1651 aa22.27■■□□□ 1.16
SEC24D-208ENST00000506622 NWD1Q149M9 1564 aa22.27■■□□□ 1.16
SEC24D-208ENST00000506622 NUP155O75694 1391 aa22.26■■□□□ 1.15
SEC24D-208ENST00000506622 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
SEC24D-208ENST00000506622 MSH6P52701 1360 aa22.25■■□□□ 1.15
SEC24D-208ENST00000506622 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
SEC24D-208ENST00000506622 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
SEC24D-208ENST00000506622 TBX22Q9Y458 520 aa22.25■■□□□ 1.15
SEC24D-208ENST00000506622 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
SEC24D-208ENST00000506622 NUTM2DQ5VT03 806 aaPredicted RBP22.22■■□□□ 1.15
SEC24D-208ENST00000506622 SLAIN2Q9P270 581 aa22.21■■□□□ 1.15
SEC24D-208ENST00000506622 C14orf37Q86TY3 774 aa22.18■■□□□ 1.14
SEC24D-208ENST00000506622 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
SEC24D-208ENST00000506622 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
SEC24D-208ENST00000506622 RGS17Q9UGC6 210 aaPredicted RBP22.14■■□□□ 1.14
SEC24D-208ENST00000506622 DIP2AQ14689 1571 aa22.14■■□□□ 1.13
SEC24D-208ENST00000506622 PIK3R4Q99570 1358 aa22.14■■□□□ 1.13
SEC24D-208ENST00000506622 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
SEC24D-208ENST00000506622 SPHKAPQ2M3C7 1700 aa22.11■■□□□ 1.13
SEC24D-208ENST00000506622 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
SEC24D-208ENST00000506622 C19orf44Q9H6X5 657 aa22.1■■□□□ 1.13
SEC24D-208ENST00000506622 AMOTL2Q9Y2J4 779 aa22.1■■□□□ 1.13
SEC24D-208ENST00000506622 ATF3P18847 181 aa22.09■■□□□ 1.13
SEC24D-208ENST00000506622 CADPS2Q86UW7 1296 aa22.09■■□□□ 1.13
SEC24D-208ENST00000506622 TRPM2O94759 1503 aa22.09■■□□□ 1.13
SEC24D-208ENST00000506622 JCADQ9P266 1359 aa22.07■■□□□ 1.12
SEC24D-208ENST00000506622 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
SEC24D-208ENST00000506622 RRBP1Q9P2E9 1410 aaKnown RBP22.04■■□□□ 1.12
SEC24D-208ENST00000506622 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
SEC24D-208ENST00000506622 PTPRUQ92729 1446 aa22.02■■□□□ 1.12
SEC24D-208ENST00000506622 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
SEC24D-208ENST00000506622 COL16A1Q07092 1604 aaPredicted RBP22■■□□□ 1.11
SEC24D-208ENST00000506622 NAIPQ13075 1403 aa22■■□□□ 1.11
SEC24D-208ENST00000506622 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
SEC24D-208ENST00000506622 KIF1BO60333 1816 aa21.99■■□□□ 1.11
SEC24D-208ENST00000506622 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
SEC24D-208ENST00000506622 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
SEC24D-208ENST00000506622 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
SEC24D-208ENST00000506622 METP08581 1390 aa21.96■■□□□ 1.11
SEC24D-208ENST00000506622 XRN1Q8IZH2 1706 aaKnown RBP21.96■■□□□ 1.11
SEC24D-208ENST00000506622 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
SEC24D-208ENST00000506622 DCCP43146 1447 aa21.95■■□□□ 1.11
SEC24D-208ENST00000506622 MEX3CQ5U5Q3 659 aaKnown RBP21.95■■□□□ 1.1
SEC24D-208ENST00000506622 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
SEC24D-208ENST00000506622 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
SEC24D-208ENST00000506622 HFM1A2PYH4 1435 aa21.91■■□□□ 1.1
SEC24D-208ENST00000506622 VGFO15240 615 aaPredicted RBP21.91■■□□□ 1.1
SEC24D-208ENST00000506622 SLC4A1APQ9BWU0 796 aaKnown RBP21.91■■□□□ 1.1
SEC24D-208ENST00000506622 SHPRHQ149N8 1683 aa21.9■■□□□ 1.1
SEC24D-208ENST00000506622 ZNF772Q68DY9 489 aaPredicted RBP21.88■■□□□ 1.09
SEC24D-208ENST00000506622 LRP6O75581 1613 aa21.88■■□□□ 1.09
SEC24D-208ENST00000506622 MST1RQ04912 1400 aa21.88■■□□□ 1.09
SEC24D-208ENST00000506622 ADGRL3Q9HAR2 1447 aa21.87■■□□□ 1.09
SEC24D-208ENST00000506622 ASXL1Q8IXJ9 1541 aa21.87■■□□□ 1.09
SEC24D-208ENST00000506622 RPGRIP1LQ68CZ1 1315 aa21.86■■□□□ 1.09
SEC24D-208ENST00000506622 NUTM2BA6NNL0 878 aaPredicted RBP21.85■■□□□ 1.09
SEC24D-208ENST00000506622 NUTM2EB1AL46 878 aaPredicted RBP21.85■■□□□ 1.09
SEC24D-208ENST00000506622 NUTM2AQ8IVF1 878 aaPredicted RBP21.85■■□□□ 1.09
SEC24D-208ENST00000506622 LRRC59Q96AG4 307 aaKnown RBP21.84■■□□□ 1.09
SEC24D-208ENST00000506622 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.08
SEC24D-208ENST00000506622 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
SEC24D-208ENST00000506622 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
SEC24D-208ENST00000506622 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
SEC24D-208ENST00000506622 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
SEC24D-208ENST00000506622 PPLO60437 1756 aa21.79■■□□□ 1.08
SEC24D-208ENST00000506622 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
SEC24D-208ENST00000506622 FOXD1Q16676 465 aa21.78■■□□□ 1.08
SEC24D-208ENST00000506622 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
SEC24D-208ENST00000506622 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.08
SEC24D-208ENST00000506622 RXRBP28702 533 aa21.77■■□□□ 1.07
SEC24D-208ENST00000506622 AFF2P51816 1311 aa21.74■■□□□ 1.07
SEC24D-208ENST00000506622 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
SEC24D-208ENST00000506622 RGL3Q3MIN7 710 aa21.73■■□□□ 1.07
SEC24D-208ENST00000506622 PNPLA6Q8IY17 1366 aa21.73■■□□□ 1.07
SEC24D-208ENST00000506622 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
SEC24D-208ENST00000506622 C8orf37Q96NL8 207 aa21.72■■□□□ 1.07
SEC24D-208ENST00000506622 ORAI2Q96SN7 254 aa21.72■■□□□ 1.07
SEC24D-208ENST00000506622 MPHOSPH9Q99550 1183 aa21.72■■□□□ 1.07
SEC24D-208ENST00000506622 ADGRF5Q8IZF2 1346 aa21.7■■□□□ 1.06
SEC24D-208ENST00000506622 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
SEC24D-208ENST00000506622 LAMC1P11047 1609 aa21.68■■□□□ 1.06
SEC24D-208ENST00000506622 ANKRD30BQ9BXX2 1392 aa21.67■■□□□ 1.06
SEC24D-208ENST00000506622 NGLY1Q96IV0 654 aa21.67■■□□□ 1.06
SEC24D-208ENST00000506622 STK26Q9P289 416 aa21.67■■□□□ 1.06
SEC24D-208ENST00000506622 ADAMTS2O95450 1211 aa21.66■■□□□ 1.06
SEC24D-208ENST00000506622 UPF1Q92900 1129 aaKnown RBP eCLIP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms