RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
PDE4D-215ENST00000506510 TSR3Q9UJK0 312 aaKnown RBP11.35□□□□□ -0.59
PDE4D-215ENST00000506510 IRF6O14896 467 aa11.34□□□□□ -0.59
PDE4D-215ENST00000506510 MINK1Q8N4C8 1332 aaPredicted RBP11.34□□□□□ -0.59
PDE4D-215ENST00000506510 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
PDE4D-215ENST00000506510 PPP4CP60510 307 aa11.32□□□□□ -0.6
PDE4D-215ENST00000506510 SLF2Q8IX21 1173 aa11.32□□□□□ -0.6
PDE4D-215ENST00000506510 KRI1Q8N9T8 703 aaKnown RBP11.32□□□□□ -0.6
PDE4D-215ENST00000506510 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
PDE4D-215ENST00000506510 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
PDE4D-215ENST00000506510 APLP1P51693 650 aa11.24□□□□□ -0.61
PDE4D-215ENST00000506510 MDM2Q00987 491 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-215ENST00000506510 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
PDE4D-215ENST00000506510 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-215ENST00000506510 SLC10A3P09131 477 aa11.23□□□□□ -0.61
PDE4D-215ENST00000506510 SLC24A3Q9HC58 644 aa11.22□□□□□ -0.61
PDE4D-215ENST00000506510 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
PDE4D-215ENST00000506510 CFHP08603 1231 aa11.21□□□□□ -0.61
PDE4D-215ENST00000506510 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
PDE4D-215ENST00000506510 RDH13Q8NBN7 331 aa11.2□□□□□ -0.62
PDE4D-215ENST00000506510 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
PDE4D-215ENST00000506510 AK7Q96M32 723 aa11.17□□□□□ -0.62
PDE4D-215ENST00000506510 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
PDE4D-215ENST00000506510 CLCN1P35523 988 aa11.16□□□□□ -0.62
PDE4D-215ENST00000506510 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-215ENST00000506510 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
PDE4D-215ENST00000506510 RSPH4AQ5TD94 716 aa11.16□□□□□ -0.62
PDE4D-215ENST00000506510 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
PDE4D-215ENST00000506510 PRR14Q9BWN1 585 aa11.16□□□□□ -0.62
PDE4D-215ENST00000506510 TRIM66O15016 1216 aa11.15□□□□□ -0.62
PDE4D-215ENST00000506510 AMHR2Q16671 573 aa11.15□□□□□ -0.62
PDE4D-215ENST00000506510 MTRQ99707 1265 aa11.15□□□□□ -0.62
PDE4D-215ENST00000506510 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-215ENST00000506510 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
PDE4D-215ENST00000506510 COPS2P61201 443 aa11.13□□□□□ -0.63
PDE4D-215ENST00000506510 TMUB1Q9BVT8 246 aa11.13□□□□□ -0.63
PDE4D-215ENST00000506510 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
PDE4D-215ENST00000506510 CD46P15529 392 aa11.12□□□□□ -0.63
PDE4D-215ENST00000506510 TJAP1Q5JTD0 557 aa11.12□□□□□ -0.63
PDE4D-215ENST00000506510 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
PDE4D-215ENST00000506510 KCNC4Q03721 635 aa11.11□□□□□ -0.63
PDE4D-215ENST00000506510 GCGRP47871 477 aa11.1□□□□□ -0.63
PDE4D-215ENST00000506510 BLOC1S3Q6QNY0 202 aa11.1□□□□□ -0.63
PDE4D-215ENST00000506510 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
PDE4D-215ENST00000506510 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
PDE4D-215ENST00000506510 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
PDE4D-215ENST00000506510 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
PDE4D-215ENST00000506510 PDE4DQ08499 809 aa11.08□□□□□ -0.64
PDE4D-215ENST00000506510 PUS10Q3MIT2 529 aaKnown RBP11.08□□□□□ -0.64
PDE4D-215ENST00000506510 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
PDE4D-215ENST00000506510 FUT2Q10981 343 aa11.07□□□□□ -0.64
PDE4D-215ENST00000506510 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
PDE4D-215ENST00000506510 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
PDE4D-215ENST00000506510 TLL1O43897 1013 aa11.03□□□□□ -0.64
PDE4D-215ENST00000506510 ZPR1O75312 459 aa11.03□□□□□ -0.64
PDE4D-215ENST00000506510 KDM4AO75164 1064 aa11.02□□□□□ -0.65
PDE4D-215ENST00000506510 MS4A1P11836 297 aa11.02□□□□□ -0.65
PDE4D-215ENST00000506510 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.65
PDE4D-215ENST00000506510 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
PDE4D-215ENST00000506510 MORN1Q5T089 497 aa11.01□□□□□ -0.65
PDE4D-215ENST00000506510 A0A0G2JS52 829 aa11□□□□□ -0.65
PDE4D-215ENST00000506510 NR1I2O75469 434 aa11□□□□□ -0.65
PDE4D-215ENST00000506510 SCUBE3Q8IX30 993 aa10.99□□□□□ -0.65
PDE4D-215ENST00000506510 HLA-CQ95604 372 aa10.99□□□□□ -0.65
PDE4D-215ENST00000506510 NUTM1Q86Y26 1132 aa10.98□□□□□ -0.65
PDE4D-215ENST00000506510 BEGAINQ9BUH8 593 aa10.98□□□□□ -0.65
PDE4D-215ENST00000506510 SLC27A5Q9Y2P5 690 aa10.98□□□□□ -0.65
PDE4D-215ENST00000506510 HOXA2O43364 376 aa10.97□□□□□ -0.65
PDE4D-215ENST00000506510 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
PDE4D-215ENST00000506510 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
PDE4D-215ENST00000506510 USP46P62068 366 aa10.95□□□□□ -0.66
PDE4D-215ENST00000506510 SPIRE2Q8WWL2 714 aa10.95□□□□□ -0.66
PDE4D-215ENST00000506510 GUCA2AQ02747 115 aa10.94□□□□□ -0.66
PDE4D-215ENST00000506510 ADH1BP00325 375 aa10.93□□□□□ -0.66
PDE4D-215ENST00000506510 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
PDE4D-215ENST00000506510 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
PDE4D-215ENST00000506510 RNF19BQ6ZMZ0 732 aa10.93□□□□□ -0.66
PDE4D-215ENST00000506510 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
PDE4D-215ENST00000506510 SPSB2Q99619 263 aa10.92□□□□□ -0.66
PDE4D-215ENST00000506510 KDM4CQ9H3R0 1056 aa10.92□□□□□ -0.66
PDE4D-215ENST00000506510 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
PDE4D-215ENST00000506510 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
PDE4D-215ENST00000506510 S1PR4O95977 384 aa10.9□□□□□ -0.66
PDE4D-215ENST00000506510 NDUFV2P19404 249 aa10.9□□□□□ -0.66
PDE4D-215ENST00000506510 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
PDE4D-215ENST00000506510 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
PDE4D-215ENST00000506510 BRICD5Q6PL45 260 aa10.88□□□□□ -0.67
PDE4D-215ENST00000506510 SLC6A16Q9GZN6 736 aa10.88□□□□□ -0.67
PDE4D-215ENST00000506510 FDX1P10109 184 aa10.87□□□□□ -0.67
PDE4D-215ENST00000506510 GGCXP38435 758 aa10.87□□□□□ -0.67
PDE4D-215ENST00000506510 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
PDE4D-215ENST00000506510 Q3C1V9 767 aa10.87□□□□□ -0.67
PDE4D-215ENST00000506510 SALL2Q9Y467 1007 aaPredicted RBP10.87□□□□□ -0.67
PDE4D-215ENST00000506510 PRDM9Q9NQV7 894 aa10.86□□□□□ -0.67
PDE4D-215ENST00000506510 PCDHGC3Q9UN70 934 aa10.86□□□□□ -0.67
PDE4D-215ENST00000506510 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
PDE4D-215ENST00000506510 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-215ENST00000506510 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
PDE4D-215ENST00000506510 FAM160A2Q8N612 972 aaPredicted RBP10.85□□□□□ -0.67
PDE4D-215ENST00000506510 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms