RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
CDC42SE2-209ENST00000506419 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
CDC42SE2-209ENST00000506419 HDGFP51858 240 aaKnown RBP21.87■■□□□ 1.09
CDC42SE2-209ENST00000506419 RIMS2Q9UQ26 1411 aa21.87■■□□□ 1.09
CDC42SE2-209ENST00000506419 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
CDC42SE2-209ENST00000506419 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
CDC42SE2-209ENST00000506419 E9PCH4 1651 aa21.84■■□□□ 1.09
CDC42SE2-209ENST00000506419 PLEKHG1Q9ULL1 1385 aa21.84■■□□□ 1.09
CDC42SE2-209ENST00000506419 NAIPQ13075 1403 aa21.83■■□□□ 1.09
CDC42SE2-209ENST00000506419 GCC2Q8IWJ2 1684 aa21.83■■□□□ 1.09
CDC42SE2-209ENST00000506419 PPP1R15AO75807 674 aaPredicted RBP21.83■■□□□ 1.09
CDC42SE2-209ENST00000506419 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
CDC42SE2-209ENST00000506419 TBX22Q9Y458 520 aa21.83■■□□□ 1.09
CDC42SE2-209ENST00000506419 TMEM131LA2VDJ0 1609 aa21.83■■□□□ 1.08
CDC42SE2-209ENST00000506419 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
CDC42SE2-209ENST00000506419 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
CDC42SE2-209ENST00000506419 ADAMTS13Q76LX8 1427 aa21.75■■□□□ 1.07
CDC42SE2-209ENST00000506419 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
CDC42SE2-209ENST00000506419 XIRP1Q702N8 1843 aaKnown RBP21.75■■□□□ 1.07
CDC42SE2-209ENST00000506419 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
CDC42SE2-209ENST00000506419 FAM135BQ49AJ0 1406 aa21.71■■□□□ 1.07
CDC42SE2-209ENST00000506419 ZNF326Q5BKZ1 582 aaKnown RBP21.7■■□□□ 1.06
CDC42SE2-209ENST00000506419 SOCS7O14512 581 aa21.68■■□□□ 1.06
CDC42SE2-209ENST00000506419 AMOTL2Q9Y2J4 779 aa21.68■■□□□ 1.06
CDC42SE2-209ENST00000506419 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
CDC42SE2-209ENST00000506419 NWD1Q149M9 1564 aa21.68■■□□□ 1.06
CDC42SE2-209ENST00000506419 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
CDC42SE2-209ENST00000506419 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
CDC42SE2-209ENST00000506419 PTPRUQ92729 1446 aa21.66■■□□□ 1.06
CDC42SE2-209ENST00000506419 PIK3R4Q99570 1358 aa21.65■■□□□ 1.06
CDC42SE2-209ENST00000506419 MSH6P52701 1360 aa21.64■■□□□ 1.06
CDC42SE2-209ENST00000506419 FOXD1Q16676 465 aa21.64■■□□□ 1.05
CDC42SE2-209ENST00000506419 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.05
CDC42SE2-209ENST00000506419 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
CDC42SE2-209ENST00000506419 SPHKAPQ2M3C7 1700 aa21.61■■□□□ 1.05
CDC42SE2-209ENST00000506419 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
CDC42SE2-209ENST00000506419 NCOA3Q9Y6Q9 1424 aa21.61■■□□□ 1.05
CDC42SE2-209ENST00000506419 METP08581 1390 aa21.61■■□□□ 1.05
CDC42SE2-209ENST00000506419 TRPM2O94759 1503 aa21.6■■□□□ 1.05
CDC42SE2-209ENST00000506419 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
CDC42SE2-209ENST00000506419 C14orf37Q86TY3 774 aa21.59■■□□□ 1.05
CDC42SE2-209ENST00000506419 MPHOSPH9Q99550 1183 aa21.57■■□□□ 1.04
CDC42SE2-209ENST00000506419 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
CDC42SE2-209ENST00000506419 RGS17Q9UGC6 210 aaPredicted RBP21.55■■□□□ 1.04
CDC42SE2-209ENST00000506419 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
CDC42SE2-209ENST00000506419 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
CDC42SE2-209ENST00000506419 SETBP1Q9Y6X0 1596 aa21.54■■□□□ 1.04
CDC42SE2-209ENST00000506419 VGFO15240 615 aaPredicted RBP21.54■■□□□ 1.04
CDC42SE2-209ENST00000506419 ATF3P18847 181 aa21.54■■□□□ 1.04
CDC42SE2-209ENST00000506419 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
CDC42SE2-209ENST00000506419 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
CDC42SE2-209ENST00000506419 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
CDC42SE2-209ENST00000506419 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
CDC42SE2-209ENST00000506419 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
CDC42SE2-209ENST00000506419 BRINP3Q76B58 766 aa21.47■■□□□ 1.03
CDC42SE2-209ENST00000506419 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-209ENST00000506419 ADGRF5Q8IZF2 1346 aa21.45■■□□□ 1.02
CDC42SE2-209ENST00000506419 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
CDC42SE2-209ENST00000506419 KIF1BO60333 1816 aa21.44■■□□□ 1.02
CDC42SE2-209ENST00000506419 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
CDC42SE2-209ENST00000506419 JCADQ9P266 1359 aa21.42■■□□□ 1.02
CDC42SE2-209ENST00000506419 CCDC144AA2RUR9 1427 aa21.41■■□□□ 1.02
CDC42SE2-209ENST00000506419 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
CDC42SE2-209ENST00000506419 ROBO2Q9HCK4 1378 aa21.41■■□□□ 1.02
CDC42SE2-209ENST00000506419 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
CDC42SE2-209ENST00000506419 DCCP43146 1447 aa21.39■■□□□ 1.02
CDC42SE2-209ENST00000506419 MST1RQ04912 1400 aa21.39■■□□□ 1.02
CDC42SE2-209ENST00000506419 PHLPP1O60346 1717 aa21.38■■□□□ 1.01
CDC42SE2-209ENST00000506419 RAB3GAP2Q9H2M9 1393 aa21.37■■□□□ 1.01
CDC42SE2-209ENST00000506419 ACIN1Q9UKV3 1341 aaKnown RBP21.37■■□□□ 1.01
CDC42SE2-209ENST00000506419 DDX17Q92841 729 aaKnown RBP21.37■■□□□ 1.01
CDC42SE2-209ENST00000506419 ADGRL3Q9HAR2 1447 aa21.37■■□□□ 1.01
CDC42SE2-209ENST00000506419 COL16A1Q07092 1604 aaPredicted RBP21.35■■□□□ 1.01
CDC42SE2-209ENST00000506419 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
CDC42SE2-209ENST00000506419 PTCH1Q13635 1447 aa21.33■■□□□ 1.01
CDC42SE2-209ENST00000506419 STK26Q9P289 416 aa21.33■■□□□ 1.01
CDC42SE2-209ENST00000506419 ANKRD30BQ9BXX2 1392 aa21.33■■□□□ 1
CDC42SE2-209ENST00000506419 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1
CDC42SE2-209ENST00000506419 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
CDC42SE2-209ENST00000506419 WAPLQ7Z5K2 1190 aa21.32■■□□□ 1
CDC42SE2-209ENST00000506419 ORAI2Q96SN7 254 aa21.32■■□□□ 1
CDC42SE2-209ENST00000506419 PPLO60437 1756 aa21.32■■□□□ 1
CDC42SE2-209ENST00000506419 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
CDC42SE2-209ENST00000506419 PRAG1Q86YV5 1406 aa21.3■■□□□ 1
CDC42SE2-209ENST00000506419 C1orf167Q5SNV9 1468 aa21.3■■□□□ 1
CDC42SE2-209ENST00000506419 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
CDC42SE2-209ENST00000506419 LRP6O75581 1613 aa21.29■■□□□ 1
CDC42SE2-209ENST00000506419 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
CDC42SE2-209ENST00000506419 C14orf93Q9H972 538 aaKnown RBP21.28■■□□□ 1
CDC42SE2-209ENST00000506419 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
CDC42SE2-209ENST00000506419 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
CDC42SE2-209ENST00000506419 HRCP23327 699 aa21.27■■□□□ 1
CDC42SE2-209ENST00000506419 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
CDC42SE2-209ENST00000506419 LRPPRCP42704 1394 aaKnown RBP21.26■□□□□ 0.99
CDC42SE2-209ENST00000506419 ABCC11Q96J66 1382 aa21.26■□□□□ 0.99
CDC42SE2-209ENST00000506419 CFAP70Q5T0N1 1121 aa21.26■□□□□ 0.99
CDC42SE2-209ENST00000506419 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
CDC42SE2-209ENST00000506419 NALCNQ8IZF0 1738 aa21.25■□□□□ 0.99
CDC42SE2-209ENST00000506419 PLEKHH1Q9ULM0 1364 aa21.24■□□□□ 0.99
CDC42SE2-209ENST00000506419 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms